mRNA_H-paniculata_contig11823.1171.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11823.1171.1
Unique NamemRNA_H-paniculata_contig11823.1171.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: Q8QKW6_ESV1K (EsV-1-14 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKW6_ESV1K)

HSP 1 Score: 244 bits (623), Expect = 3.650e-70
Identity = 187/536 (34.89%), Postives = 280/536 (52.24%), Query Frame = 1
Query:   37 INRAGRQRMLSQRLSLYSRLNP--GALSSSET---VSASLLIQFQDAQSFLQSKETS---FQYDDFLGALQG-----SSFADVIEKGEIFLSAMESYVLSLELESSREVDRLR-TVRQWVTVVTTVVTSALLLLGWLFIRGQTKLLRGEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAME------QLKSCRQGGELITCLLDDVLNIAKLESGVPLNLTRTCLSELCANVVRVSALSATSRGTRC-VFVPGEGTDGFYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVV-RRSDHDHQ---IAFSVEDDGPGVSSAEQAAMFVKFRTFHKNSGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSLKTELPSSGKLSGSSPTCI-LKPNPPSVLVVDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLFLDECFPGHATTGSAYISTLRAQGVTAAVFMCSANCSRSDEVRYRKLGAAGVFPKPVPNGATLLAVVAQSLQS 1566
            IN +G QRM SQR+S+   +      LS  +    ++ + +   ++  +   S+ T    F  DD L   Q      S+   ++E    FL  M   V  +E + S EV  L  T+  +   +  +V  A +   W   R +   +    RMIQYLFHEIRNPLNHVVNG+++VL    + G A M       +L  C   G +IT LLDDVL +A ++S   + +  T +  +  NV  + +LS++       V    E +   Y  +  +L QVL+N  +N+VKY G    V + +  + ++S H      + F V+D+G G++   Q  +F KF+TFH++SGTGLGL + + IVR MGG I V SP P    G+ F F +++      +  + G  P+   ++PN  ++LV DDE IN KIL+RKLT + ++ L WT+  + +LP  L+ + K    DV+ LDE F G+   GS YISTLR  G+   V   SANCS SD   Y+  GA     KP+P    L+A +AQ+ +S
Sbjct:   42 INVSGLQRMYSQRISMLKAVEDTRSCLSYGDEFDYINETFVEAHEELSTIPMSRTTRDAYFTVDDTLKDFQAQLLFPSTECSLVEAATTFLGYMNELVGLIETDLSDEVSDLSLTLTAFQCALFCIVVLAGVCSTWRSEREKKGYVASTDRMIQYLFHEIRNPLNHVVNGLDHVL----QTGPANMPTDDITGELGRCSAAGVIITALLDDVLAMAAIDSKATIPVYATRIPAIVNNVSDIVSLSSSQSHCNVKVETHVELSCESYMTNAVKLSQVLMNFATNAVKYAGPEKTVTIGVTTLGQKSSHKKSKDVLQFFVKDNGVGMTKETQKQLFSKFKTFHRDSGTGLGLFIANSIVRDMGGKIGVVSPDPATGCGTMFEFKLTMD-RCSETDCVGGDLPSATSIQPNL-TILVADDEQINCKILQRKLTSKAVSHLKWTILQSMTLPGVLD-TCKTSHVDVILLDEHF-GNGQLGSVYISTLRNNGIRCPVITASANCSPSDSAMYQSRGAFSTIGKPMPASEILVATIAQAYES 569          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: A0A838HCN7_9ACTN (Response regulator n=1 Tax=Propionibacteriales bacterium TaxID=2015801 RepID=A0A838HCN7_9ACTN)

HSP 1 Score: 134 bits (338), Expect = 1.250e-29
Identity = 121/385 (31.43%), Postives = 186/385 (48.31%), Query Frame = 1
Query:  433 RGEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDGFYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQIAFSVEDDGPGVSSAEQAAMFVKFR-----TFHKNSGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSL-KTELPSSGKLSGSSPTCILKPNPP--------SVLVVDDESINVKILERKLTREPIAALGW-----TVETAFSLPECLEKST-KGPPYDVLFLDECFPGHATTGSAYISTLRAQGVT--AAVFMCSANCSRSDEVRYRKLGAAGVFPKPV 1518
            R +   +  + HEIR P+N V+ G+  +L+DT  L    ++  +  +  GE +  +++D+L+ +K+E+G + L +    L ++      + A +A  +G   V     G     + D  R++QVL+NL+SN+VK+    G V LR  +V  S     + F V D G G++ A++  +F  F      T  +  GTGLGL ++  +V  MGG+++V S P     GS FSF + L +TE              I+ P PP         VLVVDD   N  IL  +LT       GW     +++   +  ECL+ +  +G PYD++ LD C PG      A   T RA G T  A V + SA    +DE R  + G A    KPV
Sbjct:  323 RFKSEFLANMSHEIRTPMNGVI-GLTGLLIDTG-LTERQLQYAEGVKGAGEALLAIINDILDFSKIEAGKLELEIVDFDLVQVVEEAAGLVAEAAQRKGLELVAYCYPGLPAALRGDPARIRQVLLNLMSNAVKFT-QHGEVVLRARLVEESGQTAVVRFEVIDTGLGIADADRQRLFEAFSQADASTTRRFGGTGLGLAISRQLVAAMGGELSVDSEPG---RGSTFSFALPLVRTEAD------------IVAPAPPFQHLLEGLRVLVVDDNDTNRLILCEQLT-------GWDMRPDSLDNGSAALECLQVADERGQPYDLVLLDMCMPGMDGLDLARRIT-RAPGSTQPALVLLTSAGDVAADEAR--QAGIAASLTKPV 679          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: A0A556QN21_9BACT (Response regulator n=1 Tax=Rariglobus hedericola TaxID=2597822 RepID=A0A556QN21_9BACT)

HSP 1 Score: 130 bits (327), Expect = 1.440e-28
Identity = 121/371 (32.61%), Postives = 171/371 (46.09%), Query Frame = 1
Query:  433 RGEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDGFYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQIAFSVEDDGPGVSSAEQAAMFVKFR-----TFHKNSGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSLKTELPSSGKLSGSSPTCILKPNPPSVLVVDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLFLDECFPGHATTGSAYISTLRAQGVTAA---VFMCSANCSRSDEVRYRKLGAAGVFPKPV 1518
            R +   +  + HEIR PLN ++    ++L     L   A E ++   + GEL+   L D+L+ +K+ESG   L      +  L  + V + A  A   G R   V G     + Q DG RL+QVL+NLLSN++K+    G VR+ +          QI F V D G G+       +F +F      T  +  GTGLGL ++S IV  MGG I V S P G+  GS F FTV       + G+L   +P  +      SVLVV+D ++N+KIL  +LT     ALG T   A    E L    KGP  DV+ +D   P     G      +R+ G  AA   +   +A     +  R  + G      KPV
Sbjct:  238 RAKGDFLANMSHEIRTPLNGIIAS-SDLLRRRDDLSPEAAEHVRLIAESGELLLKQLSDILDFSKIESGQFSLEAQPVEVPALVTDCVTLLAPKAAQGGMRIECVLGVDVPPYLQGDGFRLRQVLLNLLSNAIKFTPSGGDVRITVTQAGSHASVAQIRFEVRDTGIGMDEFAMNRLFERFTQADSSTTRRYGGTGLGLAISSRIVGMMGGRIEVESSP-GV--GSVFYFTVPFGVITAAEGELDVPAPQVVRLGL--SVLVVEDNAMNLKILGAQLT-----ALGCTHSVAVDGVEALAALKKGPLPDVILMDCHMPN--LDGWEATRCIRSWGDKAATIPIIALTAAALPEERARCMEAGMNDFLSKPV 595          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: A0A1G1TJS7_9BACT (Uncharacterized protein n=1 Tax=Hymenobacter coccineus TaxID=1908235 RepID=A0A1G1TJS7_9BACT)

HSP 1 Score: 129 bits (325), Expect = 5.700e-28
Identity = 116/384 (30.21%), Postives = 184/384 (47.92%), Query Frame = 1
Query:  433 RGEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDG--FYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQIAFSVEDDGPGVSSAEQAAMFVKFR-----TFHKNSGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSL-KTELPSSGKLSGSSPTCILKPNPPSVLVVDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLFLDECFPGHA-TTGSAYISTLRAQGVTAA-VFMCSANCSRSDEVRYRKLGAAGVFPKPVPNGATLLAVVA 1551
            R  +  +  + HEIR P+N V+ G+   L  T RL     E ++  R  G+ +  +L+DVL+IAK+ +G + L  T   L +  A  ++  A  A  +G      P   T    +   D  RL Q+L+NL+SN+VK+  ++G V ++ + +  +     + FSV D GPG+  A+QA +F  F      T  +  GTGLGL ++  +V +MGG +T++S    +  GS F+FT+ L K E P+     G +P    +     VL+V+D  I+     R + R  +   G  ++ A   P  L +    PPYDV+ +D   PG +    +A +  L    + A  V   +AN  R+D  RY   G      KP         +VA
Sbjct:  532 RARENFLANMSHEIRTPMNGVL-GMTAQLAKT-RLDARQQEMVRIVRASGQHLLVVLNDVLDIAKITAGKLELEQTAFNLCDALAEALQPLAAQAREKGLAFEAWPLRATCPVPWVLGDPHRLIQILLNLVSNAVKFT-EQGSVVVKSEQLSETPTAVTLRFSVVDTGPGIGPAQQALVFESFAQAQADTARRYGGTGLGLSISRALVEQMGGALTLSS---ALGEGSTFAFTLVLPKAEAPAEASAGGPAPYDTGRLAGARVLLVEDNEIS-----RTVVRMLLEPWGAQLDEAPDGPTALAQLAAAPPYDVVLMDIQLPGMSGADATARLRQLPDPCLAATPVIALTANAFRADGERYLAAGFNDYLAKPYDEATLYHKMVA 904          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: UPI001444D983 (PAS domain-containing protein n=3 Tax=Hymenobacter TaxID=89966 RepID=UPI001444D983)

HSP 1 Score: 129 bits (324), Expect = 6.970e-28
Identity = 111/371 (29.92%), Postives = 187/371 (50.40%), Query Frame = 1
Query:  436 GEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDGF--YQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQIAFSVEDDGPGVSSAEQAAMFVKFRTFHKNS-----GTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSL-KTELPSSGKLSGSSPTCILKPNPPSVLVVDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLFLDECFPGHATTGSAYISTLRAQGVTAAV--FMCSANCSRSDEVRYRKLGAAGVFPKP 1515
              +  +  + HEIR P+N V+ G+ N+L  T  L     E L+  R+ G+ +  +L+DVL++AK+ SG + LNL    L +   + ++  AL A  +G R    P   T  +   QAD  RL Q+++NL+SN++K+    G V+++ +++  +     + F V D G G+    QA +F  F   + ++     GTGLGL ++  +V +MGG++TVTS P     GS+F+F+++L K  +P++  L+ +  T +L      VL+V+D  IN     R + R  +   G  V  A      + +  +  P+D++ +D   PG +   +  I     +   AAV     +AN   +D  RYR  G      KP
Sbjct:  532 ARENFLANMSHEIRTPMNGVL-GVANLLAKTS-LSPEQQEYLRIIRRSGQHLLAVLNDVLDMAKIASGKLELNLESFNLCDSVTHALQPLALQALEKGLRFEGKPLSATCPYPMVQADAHRLNQIMLNLVSNAIKFTPAGGRVKVQSELLGETADTLTVRFRVTDTGLGMLPEVQARIFESFTQAYADTARHFGGTGLGLSISRGLVEQMGGELTVTSAP---RVGSSFAFSLTLAKAVVPAAESLAEAFDTGVLAGL--RVLLVEDNDIN-----RFVARCTMQEWGVVVTEAEDGASGVARFAQ-EPFDLVLMDIQMPGMSGLDATAIIRAHPEPARAAVPILALTANAFHADHERYRAAGMNDCLAKP 889          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: UPI001B30FDB3 (PAS domain-containing protein n=1 Tax=Hymenobacter terricola TaxID=2819236 RepID=UPI001B30FDB3)

HSP 1 Score: 129 bits (324), Expect = 6.970e-28
Identity = 109/372 (29.30%), Postives = 187/372 (50.27%), Query Frame = 1
Query:  433 RGEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDGF--YQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQIAFSVEDDGPGVSSAEQAAMFVKFR-----TFHKNSGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSL-KTELPSSGKLSGSSPTCILKPNPPSVLVVDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLFLDECFPGHATTGSAYISTLRAQGVTAAV--FMCSANCSRSDEVRYRKLGAAGVFPKP 1515
            R  +  +  + HEIR P+N V+ G+ N+L  TP L     E L+  R  G+ +  +L+DVL++AK+ SG + LNL    L +  A  ++  AL A  +G      P   T  F   QAD  R+ Q+++NL+SN+VK+    G V+++ +++ ++     + F V D G G++   QA +F  F      T  +  GTGLGL ++  +V +MGG++TV S    +  GS F+F+++L +   P+   ++ +  T +L      VL+V+D  IN + + R+  +E    +   V+ A  +    ++     P+D++ +D   PG +   +  +    A+   A V     +AN   +D  RYR  G      KP
Sbjct:  531 RARENFLANMSHEIRTPMNGVL-GVANLLAKTP-LTVEQQELLRIIRVSGQHLLAVLNDVLDMAKIASGKLELNLESFNLCDSVAQALQPLALQALEKGLHFEGTPLSATCPFPLVQADAHRINQIMLNLVSNAVKFTPAGGRVKVKGELLAQTADTLTVRFRVTDTGLGMAPEVQARIFESFTQAYADTARRFGGTGLGLSISRALVEQMGGELTVAS---ALGVGSTFAFSLTLARAVAPAVESVAEAFDTGVLAGV--RVLLVEDNDIN-RFVARRTMQEWGIVVTEAVDGASGVARFAQQ-----PFDLVLMDIQMPGMSGLDAMALIRAHAEPARAGVPILALTANAFHADHERYRAAGMNDCLAKP 889          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: A0A3B0REL9_9ZZZZ (Histidine kinase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0REL9_9ZZZZ)

HSP 1 Score: 128 bits (322), Expect = 8.540e-28
Identity = 106/389 (27.25%), Postives = 183/389 (47.04%), Query Frame = 1
Query:  433 RGEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDGFYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQIAFSVEDDGPGVSSAEQAAMFVKFRTFHKN-----SGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSLKTEL--PSSGKLSGSSPTCILKPNPPSVLVVDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLFLDECFP---GHATTGSAYISTLRAQGVTAAVFMCSANCSRSDEVRYRKLGAAGVFPKPVPNGATLLAVVAQSLQS 1566
            + +   +  + HE+R P+N ++   +  ++++  L     EQ++  R GGE +T +L DVL+++K+ESG +        L EL     ++ A     +G    FV    T  + + D TRL+Q++ NL+SN++K+  ++G +R+ +       +  +I+ ++ D G G+S A+Q  +F  F+    +      GTGLGL ++  + R +GGD+TVTS       G    FT+  +TEL  P +   + S    ILK +P  +L  +D ++N+K+L   L   P   +    E      E L        +D++ +D   P   G A T          Q V   V   +AN    D   Y + G +   PKP+     L A+   + Q+
Sbjct:  302 KAKSTFLAMMSHELRTPMNAILGSAQ--ILESMELNKDVREQVEMLRMGGETLTAILSDVLDLSKIESGKLDTESAAFNLHELLDQAEKLWAAPTQEKGLDLQFVISPQTPNWIKNDATRLRQIIFNLISNAIKFT-EQGTIRISVQATPVEANRSKISLAISDTGIGLSKAQQQKLFTPFQQADSSITRRFGGTGLGLSISRSLARLLGGDLTVTSVV-----GEGSVFTLDFETELAKPVTTNEAQSKVGQILK-SPLRILAAEDNALNMKVLRSFLKAFPFEIVH--AENGQVAVEILAVER----FDLVLMDVQMPVMDGVAATRQIRSKVGPNQNVP--VIAMTANAMSGDRETYLQAGMSDYVPKPIDMRQLLSAIARAASQT 673          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: A0A1G0KIY0_9GAMM (Histidine kinase n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_52_10 TaxID=1798305 RepID=A0A1G0KIY0_9GAMM)

HSP 1 Score: 129 bits (323), Expect = 8.960e-28
Identity = 114/385 (29.61%), Postives = 187/385 (48.57%), Query Frame = 1
Query:  433 RGEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDGFYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQIAFSVEDDGPGVSSAEQAAMFVKFR-----TFHKNSGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSLKTELPSSGKLSGSSPTCILKPNPPSVLVVDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLFLDECFPGHATTGSAYISTLRAQGVTAAVFMCSANCSRSDEV-RYRKLGAAGVFPKPVPNGATLLAVVAQSLQS 1566
            R +   +  + HEIR PLN ++ G+  +LV+TP L +   + +   R+ G+ +  L++D+L+++K+E+  + L      L E     V + A  A  +G   +       +     D TRL+Q+++NL+SNS+K+  +RG + +R  V      D  +  SV D G G+   +  A+F  F      T  K  GTGLGL ++  + R MGG+I VTS       GS F FTV L     S   L  S P  +   +   +LVVDD + N  I+ ++LT +    +    E+A +  E +    +  P+D++ +D   PG    G   I  L+A+G+     M  ++   ++ + R R+LG      KPV     L+  VA +L S
Sbjct:  355 RTKSEFLASMSHEIRTPLNAII-GMSELLVETP-LNNEQRKYIDVFRKAGDTLLALVNDILDLSKIEAQQLVLEKIAFNLVETVEEAVEIYAHKAAEKGIELLSEIDPAINPARMGDPTRLRQIILNLISNSLKFT-ERGEIVVRAGVGPAQGGDELLHLSVSDTGIGIPRTKLEAIFESFTQVDSSTTRKYGGTGLGLTISRSLARMMGGEIGVTSEEG---KGSTFHFTVKLAV---SKKALPVSQPVALEGKH---ILVVDDNATNRLIVNKQLTGQGARIV--EAESAEAALEIISAQPESIPFDMVLVDCHMPGK--DGFELIEMLKARGLKLNTIMMLSSADLNENMSRSRQLGITQYLIKPVKQ-KELIQHVASTLSS 722          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: A0A1G7TYG6_9BURK (Histidine kinase n=2 Tax=unclassified Duganella TaxID=2636909 RepID=A0A1G7TYG6_9BURK)

HSP 1 Score: 126 bits (317), Expect = 1.390e-27
Identity = 120/362 (33.15%), Postives = 180/362 (49.72%), Query Frame = 1
Query:  466 HEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDGFYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDH-QIAFSVEDDGPGVSSAEQAAMFVKFRTF----HKNSGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSLKT-ELPSSGKLSGSSPTCILKPNP-PSVLVVDDESINVKILERKLTREPIAALGW-TVETAFSLPECLEKSTKGPPYDVLFLDECFPGHATTGSAYISTLRAQGVTAA--VFMCSANCSRSDEVRYRKLGAAGVFPKPV 1518
            HE+R PLN ++ G   +L     L       + + +QGG+ +  L++DVL+++++E+G +  +     L +L A V  +  + A  +         +G       D TRL+QVL+NLL N+VK+  DRG VRLR+  +  +  D   + F V D+G G++  +Q A+F  F        +  GTGLGL ++  +VR MGG + V S P     GS F F VSLK  E P  G LSG          P  ++LVVDD + N     R L R+ + +LG+ T+E    +   ++     P  D++ LD   PG    G   +  LRA   TAA  V M SA+ +  +E R   +GA     KPV
Sbjct:  155 HELRTPLNAIL-GYTQILKRDKGLSLPQQTGVSTIQQGGQHLLALINDVLDLSRVEAGRMEFHPKPVRLGDLLAVVADIMRVRAEQKHLCFELELMDGLPVAVSVDETRLRQVLLNLLGNAVKFT-DRGAVRLRVLPLPEAQMDTAHLRFEVIDEGIGIADDQQQAIFRPFEQVGDASRRAGGTGLGLAISQQLVRLMGGALQVESAPG---KGSRFWFDVSLKVVEAP--GTLSGGERIATGYAGPRKTILVVDDVATN-----RALLRDLLGSLGFRTLEAENGMSGLMQAQAVRP--DMVLLDMVMPG--MDGIETMRRLRADQRTAATPVLMISASSTPEEEERSLAVGANAFLSKPV 500          
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Match: K9Q527_9CYAN (Integral membrane sensor hybrid histidine kinase n=1 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9Q527_9CYAN)

HSP 1 Score: 128 bits (321), Expect = 1.700e-27
Identity = 108/377 (28.65%), Postives = 187/377 (49.60%), Query Frame = 1
Query:  433 RGEQRMIQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCLLDDVLNIAKLESG-VPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPGEGTDGFYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQIAFSVEDDGPGVSSAEQAAMFVKF----RTFHKNSGTGLGLHLTSVIVRRMGGDITVTSPPPGMEHGSAFSFTVSLKTELPSSGKLSGSSPTCI-LKPNPP--SVLVVDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLFLDECFP---GHATTGS-----AYISTLRAQGVTAAVFMCSANCSRSDEVRYRKLGAAGVFPKP 1515
            R + + +  + HE+R PLN ++ G   ++   P+L       L    + GE +  L++DVL++AK+E+G + LNL    L  +  ++  +  L A  +     F   E    +   D  +L+Q+L+NLLSN++K+    G ++L + V+ + D+ + ++F+V+D G G+++ E   +F  F         N GTGLGL ++   V+ MGG+++V+S    +E GS F+FT+ +K+   S  +     P  I L+ N P   +L+VDD  +N K+LER LT     A+G+  + A    E +       P D+++ D   P   G+  T       A IS  +       +   +A+  + DE    + G  G   KP
Sbjct:  458 RAKSQFLANMSHELRTPLNAIL-GFSQLMNRDPQLSSTQATYLSIVNRSGEHLLNLINDVLDMAKIEAGRMNLNLKSFDLRSILNSIEDIFMLKAAEKQLSLEFTCDELVPQYILTDEKKLRQILLNLLSNAIKFT-TVGSIKLLVKVLEKEDNQYCLSFTVQDTGAGIAATELNQLFNPFIQTETGIKSNQGTGLGLPISRKFVQMMGGEMSVSSK---LEKGSIFTFTIKVKSVKESLVEPLIQRPKVIGLETNQPIYKILIVDDRWVNRKLLERLLT-----AIGFETQEANDGQEAIAIWKSWKP-DLIWTDIRMPILNGYEMTKQIRKREAAISRQQDSEQHTIILAITASILKEDEELILQSGCDGFIRKP 823          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11823.1171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QKW6_ESV1K3.650e-7034.89EsV-1-14 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
A0A838HCN7_9ACTN1.250e-2931.43Response regulator n=1 Tax=Propionibacteriales bac... [more]
A0A556QN21_9BACT1.440e-2832.61Response regulator n=1 Tax=Rariglobus hedericola T... [more]
A0A1G1TJS7_9BACT5.700e-2830.21Uncharacterized protein n=1 Tax=Hymenobacter cocci... [more]
UPI001444D9836.970e-2829.92PAS domain-containing protein n=3 Tax=Hymenobacter... [more]
UPI001B30FDB36.970e-2829.30PAS domain-containing protein n=1 Tax=Hymenobacter... [more]
A0A3B0REL9_9ZZZZ8.540e-2827.25Histidine kinase n=1 Tax=hydrothermal vent metagen... [more]
A0A1G0KIY0_9GAMM8.960e-2829.61Histidine kinase n=1 Tax=Gammaproteobacteria bacte... [more]
A0A1G7TYG6_9BURK1.390e-2733.15Histidine kinase n=2 Tax=unclassified Duganella Ta... [more]
K9Q527_9CYAN1.700e-2728.65Integral membrane sensor hybrid histidine kinase n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11823contigH-paniculata_contig11823:2874..4541 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score138.7
Seed ortholog evalue8.1e-30
Seed eggNOG ortholog395495.Lcho_3463
KEGG koko:K07315
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.histidine kinase A domain protein
EggNOG OGs1KPMM@119065,1NC9X@1224,2WGIN@28216,COG0784@1,COG0784@2,COG2198@1,COG2198@2,COG2202@1,COG2202@2,COG3447@1,COG3447@2,COG5002@1,COG5002@2
EC3.1.3.3
COG Functional cat.T
Best tax levelunclassified Burkholderiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021
Exons2
Model size1596
Cds size1596
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928893.5433528-CDS-H-paniculata_contig11823:2873..32791622928893.5433528-CDS-H-paniculata_contig11823:2873..3279Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11823 2874..3279 -
1691480659.2165449-CDS-H-paniculata_contig11823:2873..32791691480659.2165449-CDS-H-paniculata_contig11823:2873..3279Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11823 2874..3279 -
1622928893.5548968-CDS-H-paniculata_contig11823:3351..45411622928893.5548968-CDS-H-paniculata_contig11823:3351..4541Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11823 3352..4541 -
1691480659.2262769-CDS-H-paniculata_contig11823:3351..45411691480659.2262769-CDS-H-paniculata_contig11823:3351..4541Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11823 3352..4541 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11823.1171.1prot_H-paniculata_contig11823.1171.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11823 2874..4541 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11823.1171.1

>prot_H-paniculata_contig11823.1171.1 ID=prot_H-paniculata_contig11823.1171.1|Name=mRNA_H-paniculata_contig11823.1171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=532bp
STYAAITSLATSINRAGRQRMLSQRLSLYSRLNPGALSSSETVSASLLIQ
FQDAQSFLQSKETSFQYDDFLGALQGSSFADVIEKGEIFLSAMESYVLSL
ELESSREVDRLRTVRQWVTVVTTVVTSALLLLGWLFIRGQTKLLRGEQRM
IQYLFHEIRNPLNHVVNGIENVLVDTPRLGHAAMEQLKSCRQGGELITCL
LDDVLNIAKLESGVPLNLTRTCLSELCANVVRVSALSATSRGTRCVFVPG
EGTDGFYQADGTRLQQVLINLLSNSVKYVGDRGLVRLRMDVVRRSDHDHQ
IAFSVEDDGPGVSSAEQAAMFVKFRTFHKNSGTGLGLHLTSVIVRRMGGD
ITVTSPPPGMEHGSAFSFTVSLKTELPSSGKLSGSSPTCILKPNPPSVLV
VDDESINVKILERKLTREPIAALGWTVETAFSLPECLEKSTKGPPYDVLF
LDECFPGHATTGSAYISTLRAQGVTAAVFMCSANCSRSDEVRYRKLGAAG
VFPKPVPNGATLLAVVAQSLQSNCFGCRDAD*
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mRNA from alignment at H-paniculata_contig11823:2874..4541-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11823.1171.1 ID=mRNA_H-paniculata_contig11823.1171.1|Name=mRNA_H-paniculata_contig11823.1171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1668bp|location=Sequence derived from alignment at H-paniculata_contig11823:2874..4541- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCACTTACGCAGCCATCACATCGCTGGCGACATCCATCAATAGGGCGGG GAGACAGCGGATGCTGTCGCAACGGTTGTCGTTGTATTCCCGCCTTAACC CCGGCGCATTATCTAGCTCAGAAACTGTTTCTGCTTCTCTCTTGATTCAG TTCCAAGATGCTCAATCATTTCTGCAATCCAAAGAGACGTCTTTCCAGTA CGACGACTTTCTGGGGGCCTTGCAGGGGAGCAGCTTTGCGGATGTAATAG AGAAAGGCGAGATATTTTTATCTGCGATGGAGTCCTACGTCCTATCGCTG GAACTGGAAAGCAGTAGGGAGGTGGACCGTTTGAGGACTGTAAGACAATG GGTCACAGTCGTGACGACGGTGGTCACCAGCGCGCTTTTGTTACTGGGGT GGTTATTCATAAGAGGCCAGACTAAGTTGCTACGGGGGGAGCAACGGATG ATCCAGTACCTCTTCCACGAGATCCGGAATCCATTAAACCACGTCGTGAA CGGGATCGAGAACGTGCTGGTCGATACGCCTAGACTTGGTCACGCGGCCA TGGAGCAGCTCAAAAGCTGCAGGCAGGGCGGGGAGCTCATCACTTGCTTG TTGGACGACGTACTCAACATCGCAAAGCTCGAATCCGGTGTGCCGCTGAA TCTCACGCGAACTTGTTTGTCCGAGTTGTGCGCCAATGTCGTCAGGGTGA GTGCTTTAAGCGCCACATCGCGAGGAACACGCTGTGTGTTCGTGCCGGGG GAGGGGACGGATGGGTTCTACCAGGCTGATGGCACGAGGTTGCAGCAGGT TTTGATAAATCTGCTGAGTAACTCTGTAAAGTACGTCGGGGACCGGGGGC TTGTGCGCCTGAGGATGGACGTGGTTCGGCGCTCGGATCACGATCACCAG ATAGCCTTCTCGGTGGAGGACGACGGTCCAGGGGTATCGTCGGCAGAGCA AGCTGCTATGTTCGTTAAATTCCGAACGTTTCACAAGAACTCGGGGACCG GGCTGGGTCTGCATCTTACGAGTGTTATCGTGCGGCGAATGGGTGGAGAC ATTACTGTGACAAGCCCCCCCCCCGGAATGGAACACGGGTCAGCGTTTTC TTTCACGGTTTCCTTGAAGACAGAACTTCCCAGCAGCGGCAAGCTGTCCG GTTCTTCACCTACATGTATTCTGAAACCGAACCCCCCCTCGTCTCCCTTG TTCGGAGGGATGGACCGATCGGAAGAGAAGAAACGACCACCGCTGACTAT GCAGTCCTTGAGAGTGTTGGTGGTGGATGACGAGTCTATCAACGTTAAAA TTCTGGAGCGGAAGCTCACGCGGGAACCCATCGCTGCGTTGGGATGGACC GTAGAGACGGCATTCTCCCTGCCCGAGTGCCTCGAGAAATCAACGAAAGG ACCGCCGTACGATGTCCTGTTCTTGGACGAATGCTTTCCAGGACACGCGA CGACGGGATCTGCCTATATTTCCACGTTGAGGGCTCAAGGCGTTACCGCG GCTGTGTTTATGTGCTCGGCTAACTGTTCCCGGTCAGATGAGGTGCGATA TCGGAAGCTCGGCGCCGCGGGCGTTTTCCCAAAGCCTGTGCCGAATGGGG CAACGTTGCTAGCTGTTGTAGCGCAGAGTCTCCAAAGCAACTGTTTCGGC TGTCGAGATGCCGACTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig11823:2874..4541-

>mRNA_H-paniculata_contig11823.1171.1 ID=mRNA_H-paniculata_contig11823.1171.1|Name=mRNA_H-paniculata_contig11823.1171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3192bp|location=Sequence derived from alignment at H-paniculata_contig11823:2874..4541- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCACTTACGCAGCCATCACATCGCTGGCGACATCCATCAATAGGGCGGG
GAGACAGCGGATGCTGTCGCAACGGTTGTCGTTGTATTCCCGCCTTAACC
CCGGCGCATTATCTAGCTCAGAAACTGTTTCTGCTTCTCTCTTGATTCAG
TTCCAAGATGCTCAATCATTTCTGCAATCCAAAGAGACGTCTTTCCAGTA
CGACGACTTTCTGGGGGCCTTGCAGGGGAGCAGCTTTGCGGATGTAATAG
AGAAAGGCGAGATATTTTTATCTGCGATGGAGTCCTACGTCCTATCGCTG
GAACTGGAAAGCAGTAGGGAGGTGGACCGTTTGAGGACTGTAAGACAATG
GGTCACAGTCGTGACGACGGTGGTCACCAGCGCGCTTTTGTTACTGGGGT
GGTTATTCATAAGAGGCCAGACTAAGTTGCTACGGGGGGAGCAACGGATG
ATCCAGTACCTCTTCCACGAGATCCGGAATCCATTAAACCACGTCGTGAA
CGGGATCGAGAACGTGCTGGTCGATACGCCTAGACTTGGTCACGCGGCCA
TGGAGCAGCTCAAAAGCTGCAGGCAGGGCGGGGAGCTCATCACTTGCTTG
TTGGACGACGTACTCAACATCGCAAAGCTCGAATCCGGTGTGCCGCTGAA
TCTCACGCGAACTTGTTTGTCCGAGTTGTGCGCCAATGTCGTCAGGGTGA
GTGCTTTAAGCGCCACATCGCGAGGAACACGCTGTGTGTTCGTGCCGGGG
GAGGGGACGGATGGGTTCTACCAGGCTGATGGCACGAGGTTGCAGCAGGT
TTTGATAAATCTGCTGAGTAACTCTGTAAAGTACGTCGGGGACCGGGGGC
TTGTGCGCCTGAGGATGGACGTGGTTCGGCGCTCGGATCACGATCACCAG
ATAGCCTTCTCGGTGGAGGACGACGGTCCAGGGGTATCGTCGGCAGAGCA
AGCTGCTATGTTCGTTAAATTCCGAACGTTTCACAAGAACTCGGGGACCG
GGCTGGGTCTGCATCTTACGAGTGTTATCGTGCGGCGAATGGGTGGAGAC
ATTACTGTGACAAGCCCCCCCCCCGGAATGGAACACGGGTCAGCGTTTTC
TTTCACGGTTTCCTTGAAGACAGAACTTCCCAGCAGCGGCAAGCTGTCCG
GTTCTTCACCTACATGTATTCTGAAACCGAACCCCCCCTCTCCACTTACG
CAGCCATCACATCGCTGGCGACATCCATCAATAGGGCGGGGAGACAGCGG
ATGCTGTCGCAACGGTTGTCGTTGTATTCCCGCCTTAACCCCGGCGCATT
ATCTAGCTCAGAAACTGTTTCTGCTTCTCTCTTGATTCAGTTCCAAGATG
CTCAATCATTTCTGCAATCCAAAGAGACGTCTTTCCAGTACGACGACTTT
CTGGGGGCCTTGCAGGGGAGCAGCTTTGCGGATGTAATAGAGAAAGGCGA
GATATTTTTATCTGCGATGGAGTCCTACGTCCTATCGCTGGAACTGGAAA
GCAGTAGGGAGGTGGACCGTTTGAGGACTGTAAGACAATGGGTCACAGTC
GTGACGACGGTGGTCACCAGCGCGCTTTTGTTACTGGGGTGGTTATTCAT
AAGAGGCCAGACTAAGTTGCTACGGGGGGAGCAACGGATGATCCAGTACC
TCTTCCACGAGATCCGGAATCCATTAAACCACGTCGTGAACGGGATCGAG
AACGTGCTGGTCGATACGCCTAGACTTGGTCACGCGGCCATGGAGCAGCT
CAAAAGCTGCAGGCAGGGCGGGGAGCTCATCACTTGCTTGTTGGACGACG
TACTCAACATCGCAAAGCTCGAATCCGGTGTGCCGCTGAATCTCACGCGA
ACTTGTTTGTCCGAGTTGTGCGCCAATGTCGTCAGGGTGAGTGCTTTAAG
CGCCACATCGCGAGGAACACGCTGTGTGTTCGTGCCGGGGGAGGGGACGG
ATGGGTTCTACCAGGCTGATGGCACGAGGTTGCAGCAGGTTTTGATAAAT
CTGCTGAGTAACTCTGTAAAGTACGTCGGGGACCGGGGGCTTGTGCGCCT
GAGGATGGACGTGGTTCGGCGCTCGGATCACGATCACCAGATAGCCTTCT
CGGTGGAGGACGACGGTCCAGGGGTATCGTCGGCAGAGCAAGCTGCTATG
TTCGTTAAATTCCGAACGTTTCACAAGAACTCGGGGACCGGGCTGGGTCT
GCATCTTACGAGTGTTATCGTGCGGCGAATGGGTGGAGACATTACTGTGA
CAAGCCCCCCCCCCGGAATGGAACACGGGTCAGCGTTTTCTTTCACGGTT
TCCTTGAAGACAGAACTTCCCAGCAGCGGCAAGCTGTCCGGTTCTTCACC
TACATGTATTCTGAAACCGAACCCCCCCTCAGTGTTGGTGGTGGATGACG
AGTCTATCAACGTTAAAATTCTGGAGCGGAAGCTCACGCGGGAACCCATC
GCTGCGTTGGGATGGACCGTAGAGACGGCATTCTCCCTGCCCGAGTGCCT
CGAGAAATCAACGAAAGGACCGCCGTACGATGTCCTGTTCTTGGACGAAT
GCTTTCCAGGACACGCGACGACGGGATCTGCCTATATTTCCACGTTGAGG
GCTCAAGGCGTTACCGCGGCTGTGTTTATGTGCTCGGCTAACTGTTCCCG
GTCAGATGAGGTGCGATATCGGAAGCTCGGCGCCGCGGGCGTTTTCCCAA
AGCCTGTGCCGAATGGGGCAACGTTGCTAGCTGTTGTAGCGCAGAGTCTC
CAAAGCAACTGTTTCGGCTGTCGAGATGCCGACTAAAGTGTTGGTGGTGG
ATGACGAGTCTATCAACGTTAAAATTCTGGAGCGGAAGCTCACGCGGGAA
CCCATCGCTGCGTTGGGATGGACCGTAGAGACGGCATTCTCCCTGCCCGA
GTGCCTCGAGAAATCAACGAAAGGACCGCCGTACGATGTCCTGTTCTTGG
ACGAATGCTTTCCAGGACACGCGACGACGGGATCTGCCTATATTTCCACG
TTGAGGGCTCAAGGCGTTACCGCGGCTGTGTTTATGTGCTCGGCTAACTG
TTCCCGGTCAGATGAGGTGCGATATCGGAAGCTCGGCGCCGCGGGCGTTT
TCCCAAAGCCTGTGCCGAATGGGGCAACGTTGCTAGCTGTTGTAGCGCAG
AGTCTCCAAAGCAACTGTTTCGGCTGTCGAGATGCCGACTAA
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