prot_H-paniculata_contig4689.11676.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4689.11676.1
Unique Nameprot_H-paniculata_contig4689.11676.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length360
Homology
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 5.940e-86
Identity = 130/220 (59.09%), Postives = 164/220 (74.55%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQWTDG--------PDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNTCDQGSGDCEVLGEDESIMVTWNQGCPARLPAVPFIDD 212
            M I+NCG EC+R+RNFVTN+ I+DN I+ CG+YDYR++  G+ GEAIY+GTSSNQW DG        PDG N+NL++GN + P GNECVD+KEGAT NV++ N C +Q D +SGCY SRG+ N FRYNT  NC+G GIRLGG E+DGITYG +N VY N F  TG GSI AR+ PQG++C N+C+ G  D    G+DE I  +W+Q CP+ LP+VPFIDD
Sbjct:  216 MKIQNCGMECIRMRNFVTNTVIIDNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFRYNTAENCLGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICENSCEDGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDD 435          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: D8LJ29_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ29_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 2.100e-85
Identity = 125/220 (56.82%), Postives = 159/220 (72.27%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQW--------TDGPDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNTCDQGSGDCEVLGEDESIMVTWNQGCPARLPAVPFIDD 212
            + I+NCG EC+R+RNFVTN+ I +N I+ CG+YD+RF   G+ GEAIY+GTSSNQW        T+GPDGSN+NL++GN + P GNECVD+KEGAT NV++ N+C +Q D +SGCY SRG+ N FRYNT   C+GAGIRLGG  +DG  YG +N VY N F  T AGSI +R  PQG++C N+C  G       G+DE I  +W+QGCPA  P+VPFIDD
Sbjct:   21 LKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNELVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAIQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCADGECGVSEEGDDEEIEGSWDQGCPASFPSVPFIDD 240          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 1.480e-81
Identity = 126/221 (57.01%), Postives = 162/221 (73.30%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQW--------TDGPDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNTCDQGSGDCEVLGE-DESIMVTWNQGCPARLPAVPFIDD 212
            + I+NCG EC+R+RNFVTN+ I +N I+ CG+YD+RF   G+ GEAIY+GTSSNQW        T+GPDGSN+NL++GN + P GNECVD+KEGAT NV++ N+C +Q D +SGCY SRG+ N FRYNT   C+GAGIRLGG  +DG  YG +N VY N F  T AGSI +R  PQG++C N+C   +G+C V  E DE I  +W+QGCP+  P+VPFIDD
Sbjct:  170 LKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAVQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSC--ANGECGVSEEGDEEIEGSWDQGCPSSFPSVPFIDD 388          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 6.160e-74
Identity = 109/192 (56.77%), Postives = 143/192 (74.48%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQWTDGPDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNTCDQGSGDCEVLGEDESI 192
            M ++NCGGECVRL++ V N++++ NTI  CG++DY F+ G +NGE +Y+GTSS QWT+G D  N NL+SGN +   GNECVD+KEGA+GNVI++N C+EQLD +SGCY SRG GN FRYN G +C+GAG+RLGGWEVDG  YG  N VY N F   G G++      QG +CGNTC+ GS  C ++GED+ +
Sbjct:  162 MIVQNCGGECVRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQWTNGEDTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCEDGS--CSLVGEDDDV 351          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 1.980e-72
Identity = 105/191 (54.97%), Postives = 140/191 (73.30%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQWTDGPDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNTCDQGSGDCEVLGEDES 191
            M ++NCGGECVRL++ V N+++  NTI  CG++DY F+   +NGE +Y+GTSS QWT+G D  N N++S N++   GNECVD+KEG++GNVI++N C++QLD +SGCY SRG GN FRYN G+ C GAG+RLGGWEVDG  YG  N VY N F   G G++      QG +CGNTC++GS  C + G+DES
Sbjct:  162 MVVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQWTNGEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCEEGS--CSLTGDDES 350          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 5.340e-69
Identity = 98/178 (55.06%), Postives = 132/178 (74.16%), Query Frame = 0
Query:    3 IRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQWTDGPDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNTCDQGS 180
            ++NCG ECVRL++F+  + I DN I  CG+ D+ + + G+NGE IYVGTSS QW+DGPD  N N I+GN + P GNECVD+KEG+TG +++ N C+ QLD DSGC+GSRG GNVFRYNT ++C+G G+R+GGWEVDG  YG +N +Y+N F    +G ++    PQG VCGN+C  G+
Sbjct:  137 VQNCGDECVRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQGGA 314          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 2.440e-66
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQWTDGP-DGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNTCDQGSGDCEVLGE--DESIMVTWNQGC 200
            M ++NCGGECVRL++ VTN++I  NTI  CG++DY F  G  NG+ + +GTSS++W DG  D   +NL++GNV+    NECVDVKEGA GNVI++N C  QLD +SGCY SRG+ N+FR N G++C+GAG+RLGGWEVDG  YG  N VYDN F   G G++      QG +CGNTC     DC+++G+  D++I  TW+  C
Sbjct:  123 MAVQNCGGECVRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWPDGEEDVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTC--AGDDCQLIGDYLDDTID-TWDHAC 322          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 192 bits (488), Expect = 1.550e-54
Identity = 99/189 (52.38%), Postives = 122/189 (64.55%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQWTDG------PDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGN-TCDQGSGD 182
            M+++N GGECVRLR +VT + I DNT   CG+YD++F++GG+NGEAIYVGTSSNQW DG      PD SNHN I  N     GNECVD+KEGA  N+++ N C+ Q DP+S  + SRG  N+FRYN   +  GAG+RLGG  VDG  YG  N+VY N         +    APQ  VCGN T D   GD
Sbjct:  164 MSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEGD 352          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: A0A1G2MDL9_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_49_25 TaxID=1802305 RepID=A0A1G2MDL9_9BACT)

HSP 1 Score: 190 bits (483), Expect = 4.120e-52
Identity = 94/181 (51.93%), Postives = 117/181 (64.64%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQWTDG------PDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNT 175
            MT++N GGEC+RLR F T S I  NTI  CG YD+ F+ GG+NGE IY+GTS+ QW DG      PD +  NL+  N +   GNEC+D+KEGAT N+I+ N C  Q D +SG + SRG GN+FRYN     VG GIRLGG  V+GI YG  N+VY+N       G I  +  PQG +CGNT
Sbjct:    1 MTLKNSGGECLRLRYFATKSEIAYNTIANCGAYDFLFNAGGKNGEGIYIGTSNKQWGDGKNPTNDPDETKDNLVHHNYIDTQGNECIDIKEGATANIIEYNTCRGQKDSESGGFDSRGDGNIFRYNDVRGSVGGGIRLGGASVNGIQYGKNNDVYENTIVDNKNGGIRFQTTPQGKICGNT 181          
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Match: UPI001998BEE9 (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Roseiflexaceae bacterium TaxID=2762507 RepID=UPI001998BEE9)

HSP 1 Score: 182 bits (462), Expect = 1.030e-50
Identity = 97/187 (51.87%), Postives = 119/187 (63.64%), Query Frame = 0
Query:    1 MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVGTSSNQWTDG------PDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQLDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYDNRFETTGAGSIAARQAPQGIVCGNTCDQGSG 181
            MT RN GGEC+RLR FV NS I  +T   CG+ D+RF  GG+NGEAIY+GT+  Q  DG      PD SN+N I  N     GNECVD+KE AT N+++NN C  Q DP+S  + SRGSGN+FRYNT    VGAG+RLGG   D  T G +N+VY N      AG I  ++APQ  +CGNT +   G
Sbjct:  146 MTFRNGGGECLRLRYFVQNSEIAQSTFLNCGVRDFRFKAGGKNGEAIYIGTAPEQRGDGKNPTTDPDQSNNNWIHHNNFNTQGNECVDIKEAATNNIVENNTCTGQKDPNSAGFDSRGSGNIFRYNTSYGNVGAGVRLGG---DTATDGIDNQVYANILHHNDAGGIKFQRAPQRTICGNTINDNRG 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4689.11676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ42_ECTSI5.940e-8659.09FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LJ29_ECTSI2.100e-8556.82FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K1D2_9PHAE1.480e-8157.01Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D7FXR8_ECTSI6.160e-7456.77FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR9_ECTSI1.980e-7254.97FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KT05_9PHAE5.340e-6955.06Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
D7FZD2_ECTSI2.440e-6652.71FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
UPI00036AEC551.550e-5452.38right-handed parallel beta-helix repeat-containing... [more]
A0A1G2MDL9_9BACT4.120e-5251.93F5/8 type C domain-containing protein n=1 Tax=Cand... [more]
UPI001998BEE91.030e-5051.87Right-handed parallel beta-helix repeat-containing... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 112..134
e-value: 190.0
score: 10.8
coord: 17..51
e-value: 480.0
score: 9.5
coord: 143..165
e-value: 3700.0
score: 3.2
coord: 63..85
e-value: 1000.0
score: 7.1
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..349
e-value: 5.4E-9
score: 37.4
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 2..163
e-value: 6.1E-6
score: 26.2
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 8..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4689contigH-paniculata_contig4689:2641..8055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4689.11676.1mRNA_H-paniculata_contig4689.11676.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4689 2112..8077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4689.11676.1 ID=prot_H-paniculata_contig4689.11676.1|Name=mRNA_H-paniculata_contig4689.11676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=360bp
MTIRNCGGECVRLRNFVTNSRILDNTIDYCGLYDYRFSDGGENGEAIYVG
TSSNQWTDGPDGSNHNLISGNVMKPFGNECVDVKEGATGNVIQNNQCAEQ
LDPDSGCYGSRGSGNVFRYNTGANCVGAGIRLGGWEVDGITYGTENEVYD
NRFETTGAGSIAARQAPQGIVCGNTCDQGSGDCEVLGEDESIMVTWNQGC
PARLPAVPFIDDENYIEPTFTTSSTTEEATTQSSEEDDSSSTSSSSTEES
TTEDTDDENSSSTTTLTSEESTSQDSDDDDSSSTTSSSTEESTTEDSDDD
DSSSTTTLPTEESTPHDSADDDSSSSTTTSTREESTIQEEEEVSNTQGRH
GRRYRPGHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence