prot_H-paniculata_contig4686.11668.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4686.11668.1
Unique Nameprot_H-paniculata_contig4686.11668.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
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BLAST of mRNA_H-paniculata_contig4686.11668.1 vs. uniprot
Match: A0A6H5L4B6_9PHAE (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4B6_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 4.800e-11
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:    5 EGRRNSNGLQQQQASMASSGGGTAKELPLLKDVGVAKREELFVKKVQLCTMVYRFDSDLAL 65
            EG  NS  +QQ+ ASMAS   G  +E+PLLKDV +AKRE LFV+KV+LCT+VYRFD+++ +
Sbjct:    7 EGISNSKSVQQR-ASMASGERGQVREVPLLKDVSLAKREALFVQKVELCTVVYRFDNEMTM 66
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BLAST of mRNA_H-paniculata_contig4686.11668.1 vs. uniprot
Match: D7FHE5_ECTSI (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE5_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.490e-9
Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:   20 MASSGGGTAKELPLLKDVGVAKREELFVKKVQLCTMVYRFDSDLAL 65
            MAS   G  +E+PLLKDVG+AKRE LFV+KV+LCT+VYRFD+++ +
Sbjct:    1 MASGERGQVREVPLLKDVGLAKREALFVQKVELCTVVYRFDNEMGM 46
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4686.11668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4B6_9PHAE4.800e-1159.02Serine/threonine protein phosphatase 2A regulatory... [more]
D7FHE5_ECTSI1.490e-963.04Serine/threonine protein phosphatase 2A regulatory... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4686contigH-paniculata_contig4686:2810..3961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4686.11668.1mRNA_H-paniculata_contig4686.11668.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4686 2810..13446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4686.11668.1 ID=prot_H-paniculata_contig4686.11668.1|Name=mRNA_H-paniculata_contig4686.11668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MVSAEGRRNSNGLQQQQASMASSGGGTAKELPLLKDVGVAKREELFVKKV
QLCTMVYRFDSDLALQLAGGAGGPAVQMGNPDTGGKE
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