prot_H-paniculata_contig468.11653.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig468.11653.1
Unique Nameprot_H-paniculata_contig468.11653.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length135
Homology
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: A0A6H5JER8_9PHAE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER8_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 7.760e-65
Identity = 106/134 (79.10%), Postives = 118/134 (88.06%), Query Frame = 0
Query:    3 GAGAP--ITAKVMDEAAMSEVQQRETAVRGLLHRDPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPRNNGPLFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            GAGAP  +   V D AAM EVQQRETAVRG+LHRDP GALR++LE PP+FCKDEAVK K+MECV+MVL+GVREDQIENCL+ LS DE D+LVKYVYKGLG+PRNNGPLFKWHAKVLEKGG GCVMRTLV R+TV
Sbjct:  469 GAGAPSKVPGAVSDPAAMGEVQQRETAVRGMLHRDPGGALRRSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLFKWHAKVLEKGGPGCVMRTLVSRQTV 602          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: D8LCU1_ECTSI (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU1_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.260e-53
Identity = 90/116 (77.59%), Postives = 100/116 (86.21%), Query Frame = 0
Query:    4 AGAP--ITAKVMDEAAMSEVQQRETAVRGLLHRDPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPRNNGPLFKWHAKVLE 117
            AGAP  +   V D AAM EVQQRETAVRG+LHRDP GALRK+LE PPIFCKDEAVK K+ ECV+MVL+GVREDQIENCL+ LS DE D+LVKYVYKGLG+PRNNGPLFKWHAK L+
Sbjct:  243 AGAPSKVPGAVSDPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPIFCKDEAVKAKSTECVLMVLTGVREDQIENCLAGLSLDEIDVLVKYVYKGLGMPRNNGPLFKWHAKSLD 358          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: A0A835ZBW9_9STRA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.690e-38
Identity = 63/117 (53.85%), Postives = 86/117 (73.50%), Query Frame = 0
Query:   18 MSEVQQRETAVRGLLHRDPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPRNNGPLFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            M+ V +RE +VR LLH+D   ALRKALE+PP+  +D+AVKDKN + V+ VL   ++ Q+   ++ LS +E+D L+KYVY+GL  P  NG LF+WHA VLE+GG GCV+R + DRRTV
Sbjct:    1 MAAVAERERSVRSLLHKDLTAALRKALENPPVGTRDKAVKDKNTDVVLDVLGAAKDAQLAPAVAALSAEESDALMKYVYRGLAKPAPNGALFRWHAAVLERGGVGCVVRAVADRRTV 117          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: A0A0C9W0K6_9AGAM (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Boletales TaxID=68889 RepID=A0A0C9W0K6_9AGAM)

HSP 1 Score: 99.0 bits (245), Expect = 9.160e-24
Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 0
Query:   18 MSEVQQRETAVRGLLHR-DPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPR----NNGPLFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            +S+ +Q++ AVRG L + D PGAL  AL+ PP     E  K+  ++ VV +L+  +  +I N L +LS D  D L+KY+YKG+G+P     +   L  WH K+ E  GTGC++R + DRRTV
Sbjct:   33 LSDAKQKQVAVRGSLTKGDIPGALSIALDSPPYGPNVEEAKNLTLQTVVSILNSTKSTEIPNVLKSLSQDAQDTLMKYIYKGMGMPGWGDVSGSVLLGWHEKLTEVAGTGCIVRVMTDRRTV 154          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: A0A0C3DGE3_9AGAM (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3DGE3_9AGAM)

HSP 1 Score: 97.8 bits (242), Expect = 2.590e-23
Identity = 52/122 (42.62%), Postives = 75/122 (61.48%), Query Frame = 0
Query:   18 MSEVQQRETAVRGLLHR-DPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPR----NNGPLFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            +S+ +QR++AVR  L + D PGAL  ALE+PP     E  K+  ++ VV VL+  +  +I   L +LS D  D L+KY+YKG+G+P     +   L  WH K+ E  GTGC++R + DRRTV
Sbjct:   33 LSDARQRQSAVRSALSKSDIPGALNIALENPPYGPNVEEAKNLTLQIVVSVLNSTKGTEIPQVLKSLSEDAQDTLMKYIYKGMGMPGWGDVSGSVLLAWHEKLTEIAGTGCIVRVMSDRRTV 154          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: A0A058ZHQ4_FONAL (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZHQ4_FONAL)

HSP 1 Score: 97.1 bits (240), Expect = 8.250e-23
Identity = 49/125 (39.20%), Postives = 75/125 (60.00%), Query Frame = 0
Query:   13 MDEAAMSEVQQRETAVRGLLHR-DPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPRN--NGPLFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            +D + ++ +  R T VR LL++ D  G++  A+++PP  C D A+K KN+E V+  LS VR   I   + +L+P++ D LVKY+Y G  +P    +G L  WH K +E GG G + R L  R+TV
Sbjct:   47 VDASVVASINDRATNVRTLLNKGDAAGSVAVAVDNPPFNCNDAALKAKNLETVMSSLSAVRAADIPAVIKSLTPEQVDNLVKYIYAGFAIPSGQYSGHLLLWHEKAIEVGGLGSITRVLTSRKTV 171          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: A0A409VB11_9AGAR (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409VB11_9AGAR)

HSP 1 Score: 94.0 bits (232), Expect = 8.730e-22
Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   18 MSEVQQRETAVRGLLHR-DPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPR----NNGPLFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            + +V+QR+ AVR LL + D  GAL   LE+ P     +  K+ N++ ++ VL+  +   I N + TLSPD  D L+KY+YKG+G+P     +   L  WH K+ E  G GC++RT+ DRRTV
Sbjct:   35 LDDVRQRQGAVRSLLAKNDISGALSVILENAPYGPNVDDAKNLNLQTLLTVLNTTKSTDITNIIKTLSPDAQDTLMKYLYKGMGLPGWGDISGSVLLGWHEKLTEVAGVGCIVRTMTDRRTV 156          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: A0A197JPH3_9FUNG (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JPH3_9FUNG)

HSP 1 Score: 92.4 bits (228), Expect = 3.400e-21
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   19 SEVQQRETAVRGLLHR-DPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPR--NNGPLFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            ++V  R   VR LL R +  GAL  +L++PP      A K +N + V+ VL+ ++   +   + +LSP+E D+L+KY+Y G+  P   N+G L  WH K+ E  G GC++R + DRRTV
Sbjct:   37 AQVNSRAQEVRSLLQRGNTSGALSTSLQNPPYGAPFHAAKARNTQTVMEVLNSIKVADVPQLVKSLSPEEQDVLMKYLYAGMAAPEQNNSGHLLAWHEKLTEVAGQGCIVRVITDRRTV 155          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: A0A0L0DJS4_THETB (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJS4_THETB)

HSP 1 Score: 92.0 bits (227), Expect = 4.010e-21
Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 0
Query:   18 MSEVQQRETAVRGLLHR-DPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPRNNGPLFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            M+ V+ +E  +  +L R D  GAL  A++ PP    D  V+ +    V  +L GVR+ +IE  +++ SPDE D+L+K+VY+G+ V   +G L KWHA + +  G G ++R L DR +V
Sbjct:   31 MARVEAKEAEINSMLSRGDHAGALAAAMDQPPTDTTDADVRQRFGLLVASILGGVRDSEIETAVNSFSPDEQDLLMKFVYRGMAVGTESGKLLKWHAALFKACGHGAIVRALSDRASV 148          
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Match: V2YMX6_MONRO (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=V2YMX6_MONRO)

HSP 1 Score: 92.0 bits (227), Expect = 4.560e-21
Identity = 47/120 (39.17%), Postives = 72/120 (60.00%), Query Frame = 0
Query:   17 AMSEVQQRETAVRGLLHR-DPPGALRKALEHPPIFCKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLGVPRNNGP-LFKWHAKVLEKGGTGCVMRTLVDRRTV 134
            A+++ +Q   AVR  L + D  GAL   L+  P     E  K  +++ ++ +L+  + + I N L +LSPD  D L+KY+YKG+ +  +NG  L  WH K+ E  GTGC++RT+ DRRTV
Sbjct:   34 ALNDAKQATVAVRSALSKNDVVGALSLVLDTAPYGPSAEEAKTVSLQNILTILNSTKSNDISNALKSLSPDAQDTLMKYLYKGMAMADSNGSVLLSWHEKLTEVAGTGCIVRTMTDRRTV 153          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig468.11653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JER8_9PHAE7.760e-6579.10Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
D8LCU1_ECTSI1.260e-5377.59Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A835ZBW9_9STRA3.690e-3853.85Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0C9W0K6_9AGAM9.160e-2441.80Actin-related protein 2/3 complex subunit 5 n=2 Ta... [more]
A0A0C3DGE3_9AGAM2.590e-2342.62Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A058ZHQ4_FONAL8.250e-2339.20Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A409VB11_9AGAR8.730e-2240.98Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A197JPH3_9FUNG3.400e-2138.66Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0L0DJS4_THETB4.010e-2138.14Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
V2YMX6_MONRO4.560e-2139.17Actin-related protein 2/3 complex subunit 5 n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006789Actin-related protein 2/3 complex subunit 5PFAMPF04699P16-Arccoord: 15..134
e-value: 3.0E-32
score: 112.2
IPR006789Actin-related protein 2/3 complex subunit 5PANTHERPTHR12644ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARCcoord: 13..134
IPR036743Actin-related protein 2/3 complex subunit 5 superfamilyGENE3D1.25.40.190coord: 8..134
e-value: 5.8E-34
score: 119.4
IPR036743Actin-related protein 2/3 complex subunit 5 superfamilySUPERFAMILY69103Arp2/3 complex 16 kDa subunit ARPC5coord: 14..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig468contigH-paniculata_contig468:23553..25824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig468.11653.1mRNA_H-paniculata_contig468.11653.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig468 22271..26587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig468.11653.1 ID=prot_H-paniculata_contig468.11653.1|Name=mRNA_H-paniculata_contig468.11653.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
MGGAGAPITAKVMDEAAMSEVQQRETAVRGLLHRDPPGALRKALEHPPIF
CKDEAVKDKNMECVVMVLSGVREDQIENCLSTLSPDETDILVKYVYKGLG
VPRNNGPLFKWHAKVLEKGGTGCVMRTLVDRRTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006789ARPC5
IPR036743ARPC5_sf