prot_H-paniculata_contig46708.11639.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46708.11639.1
Unique Nameprot_H-paniculata_contig46708.11639.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig46708.11639.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.880e-8
Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 0
Query:    1 MTLQFPGLRWDASLGCPDHPKNVMGISEVQRRGDRLIDKRDICRTCRMAGKGAGILASELLEVVDMSNDAG 71
            M  +FPGLRW ASL CP H +++       RRGD+L+     C  C     G G  A +LLE+VD+    G
Sbjct:  801 MCSEFPGLRWRASLKCPQHEQDMQISRTATRRGDKLLHGAT-CNLCDSETGGLGAAAIDLLEMVDIRRSRG 870          
BLAST of mRNA_H-paniculata_contig46708.11639.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.510e-8
Identity = 26/71 (36.62%), Postives = 40/71 (56.34%), Query Frame = 0
Query:    1 MTLQFPGLRWDASLGCPDHPKNVMGISEVQRRGDRLIDKRDICRTCRMAGKGAGILASELLEVVDMSNDAG 71
            M + FPGLRW+ SL CP H   +   ++V   GD+ +++R  C  C    +G G  A +L+ +VD+  D G
Sbjct:  672 MLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLERR--CPRCSPQTRGLGAAAIDLIRMVDIRLDRG 740          
BLAST of mRNA_H-paniculata_contig46708.11639.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.310e-7
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 MTLQFPGLRWDASLGCPDHPKNVMGISEVQRRGDRLIDKRDICRTCRMAGKGAGILASELLEVVDM 66
            M   FPGLRW ASL CP+H +++   +   R GD+L+ +   C  C     G G  A+ELL++VD+
Sbjct:  939 MCSAFPGLRWCASLKCPEHKQDMPISNTATRPGDKLLLEHG-CTLCSSETGGVGAAATELLQMVDV 1003          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46708.11639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FL89_ECTSI1.880e-840.85LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI3.510e-836.62LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5JME6_9PHAE2.310e-740.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46708contigH-paniculata_contig46708:911..1327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46708.11639.1mRNA_H-paniculata_contig46708.11639.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46708 911..1329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46708.11639.1 ID=prot_H-paniculata_contig46708.11639.1|Name=mRNA_H-paniculata_contig46708.11639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
MTLQFPGLRWDASLGCPDHPKNVMGISEVQRRGDRLIDKRDICRTCRMAG
KGAGILASELLEVVDMSNDAG
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