mRNA_H-paniculata_contig46511.11605.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig46511.11605.1
Unique NamemRNA_H-paniculata_contig46511.11605.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 174 bits (440), Expect = 6.340e-47
Identity = 95/241 (39.42%), Postives = 148/241 (61.41%), Query Frame = 1
Query:   34 EPKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKY---REFPGA---VGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFH-KIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            EP ++Q+A A     HW+ A +++++ L DNG W+ V+ P N   V    +YK KL+ DG+VE+YK RLVA G  QI+G  YQE  SP      ++   +LAA Q+W L  +D   A+L   + +E+++E+P  Y   RE+P +   V +L K++YGL QA R WN K+TT +   GF QS++D  +F  K  +GD IA+++ YVDD+LI++  ++  ++      S+ KLKDLG  +Y++
Sbjct:  159 EPNSYQKAVAHS---HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTEEVYMELPQGYTFKREYPTSSRLVCKLHKSLYGLKQASRAWNSKLTTSVLKYGFKQSNSDYSLFTMKTHNGDFIALLV-YVDDILIASSSIQAKNDVKGYLSSEFKLKDLGKVKYFL 395          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: A0A0V0IXE8_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IXE8_SOLCH)

HSP 1 Score: 164 bits (415), Expect = 3.990e-43
Identity = 91/238 (38.24%), Postives = 142/238 (59.66%), Query Frame = 1
Query:   31 VEPKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKY---REFPGAVGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFHKIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
             EP N+ EA +    + W  A + ++Q L DN  W  V  P+ K  +    +YK K   DGEVE++K RLVA G  Q +G+ Y E  SP    ++++ ++S+AAI+ W+L  +D   A+LQ  + +E+++ IP  +   +   G V RL K++YGL QA R WN+K+T  LT+ GF QS  D  +F K+ DGD I V+++YVDDLL++   L ++  +     +  K+KDLG+ RY++
Sbjct:  443 TEPANYSEAASD---DRWILAMKNEIQALEDNKTWEIVTLPQEKKAIGCRWVYKIKYKADGEVERFKARLVAKGYSQKEGLDYHETFSPVVRMSTVRAVISVAAIKGWKLYQMDVYNAFLQGDLYEEVYMNIPEGFSRQKRTDGKVCRLLKSLYGLKQASRQWNIKLTKALTSSGFHQSTRDYSLFTKM-DGDKIVVVMVYVDDLLLTGNDLSMIQHTKETLHTAFKIKDLGELRYFL 676          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: A0A507FH27_9FUNG (DNA-directed DNA polymerase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FH27_9FUNG)

HSP 1 Score: 165 bits (417), Expect = 7.340e-43
Identity = 89/234 (38.03%), Postives = 138/234 (58.97%), Query Frame = 1
Query:   37 PKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYREFPGAVGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFHKIVDGDVIAVIIMYVDDL-LISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            P N ++A A P  +HW  AE  ++Q L  N  +T V R  +   ++   +YK KL++DG +E+++ RLVA G  Q  G  Y E  SP    A+ + +L+LAA+ +W+ R  DF  A+L   +D  I++  P  Y   P  +  L+KAIYGL QAGR W  ++T+ L AKG+ QS  DPCVF +  D D + ++ +YVDDL +  T     +D ++A  R++ KL+DLG+  +++
Sbjct: 1034 PSNRKQAMAGPNKQHWLDAESYELQQLETNNTYTLVNRTASIKCITCRWVYKCKLNQDGSIERFRARLVARGFLQRHGYDYMETYSPVMRIATFRWLLALAALNNWQTRSADFSSAFLYGVLDTPIYMLPPDGYNADPTKIWLLNKAIYGLKQAGRVWFYRLTSYLKAKGYQQSRADPCVFFQHSDSDSV-ILSIYVDDLAMFGTPAA--LDRTVATLRAEFKLRDLGELSHFV 1264          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: A0A7D9DFN2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DFN2_PARCT)

HSP 1 Score: 155 bits (393), Expect = 1.520e-42
Identity = 85/237 (35.86%), Postives = 139/237 (58.65%), Query Frame = 1
Query:   37 PKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYREFPGA----VGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFHKIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            P+N+ EA  SPQ   W+ A + ++  L +N  +     P+ K  V    +Y  K D++G +E +K R VA G  Q+KGI YQE  +P  +  SI+ ++ LA   D  +  +D + AYL API QE++++ P  + E   +    V RL K++YGL Q+GR WN+ +   L   GF ++H D CV+ K VD D I ++I++VDDL+I++  +++M+E     ++  K+KDLG   +++
Sbjct:   69 PQNYTEAMGSPQAREWEQAMKEEISSLKENDTYELSTLPEGKASVGGKWVYTTKQDQNG-IESFKARYVAKGYSQVKGIDYQETFAPTASITSIRVLMQLAVKHDLIVHQMDVKTAYLHAPITQELYIDQPQGFEEVSESGERLVYRLKKSLYGLKQSGRNWNILLHEHLANDGFVRNHADHCVYKKQVD-DKIVIVIVWVDDLIIASDSMQLMEEFKESMKTQFKMKDLGRITFFL 303          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435)

HSP 1 Score: 160 bits (404), Expect = 2.610e-42
Identity = 85/236 (36.02%), Postives = 137/236 (58.05%), Query Frame = 1
Query:   34 EPKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYREFPGA--VGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFHKIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            EP N++EA  SP    W  A + +M  + +N  WT V+ P ++  +    I+K+K D DG V  YK RLVA G RQ++GI Y E  SP     S++ ML++AA  D+E+  +D + A+L   +++E+++  P  + +  GA  V +L ++IYGLVQA R WN +  + + A GF Q+  + C++ K V G  +A +I+YVDD+L+    ++ +D           +KDLG+A Y +
Sbjct:    7 EPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAYGFIQTFGEACIYKK-VSGSSVAFLILYVDDILLIGNDIEFLDSIKGYLNKSFSMKDLGEAAYIL 241          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: UPI0020240260 (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020240260)

HSP 1 Score: 155 bits (393), Expect = 3.260e-42
Identity = 82/236 (34.75%), Postives = 137/236 (58.05%), Query Frame = 1
Query:   34 EPKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYREFPGA--VGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFHKIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            EP N++EA A P  + W  A + ++  + +N  WT  + P ++  +    I+K+K D DG V  YK RLVA G RQ++G+ Y E  SP     S++ ML++AA  D+E+  +D + A+L   + +E+++  P  + +   A  V +L ++IYGLVQA R WN++    + A GF Q++ + CV+ K V G  +A +I+YVDD+L+    ++ ++   A       +KDLG+A Y +
Sbjct:   15 EPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKK-VSGSSVAFLILYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYIL 249          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: UPI002025A47D (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025A47D)

HSP 1 Score: 158 bits (400), Expect = 1.100e-41
Identity = 83/236 (35.17%), Postives = 138/236 (58.47%), Query Frame = 1
Query:   34 EPKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYREFPGA--VGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFHKIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            EP N++EA A P    W  A + +++ + +N  WT  + P ++  +    I+K+K D DG V  YK RLVA G RQ++G+ Y E  SP     S++ ML++AA  D+E+  +D + A+L   + +E+++  P  + +   A  V +L ++IYGLVQA R WN++    + A GF Q++ + CV+ K V G  +A +I+YVDD+L+    ++++D   A       +KDLG+A Y +
Sbjct:   15 EPSNYEEAMAGPDSNKWLEAMKSEIESMYENKVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAYYDYEIWQMDVKTAFLNGHLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFMQTYGEACVYKK-VSGSSVAFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYIL 249          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 155 bits (393), Expect = 1.840e-41
Identity = 84/220 (38.18%), Postives = 134/220 (60.91%), Query Frame = 1
Query:   97 EVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYR---EFPGA---VGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVF-HKIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            +++++ L DNG W+ V+ P N   V    +YK KL+ DG+VE+YK RLVA G  QI+G  YQ+  SP     +++   +LAA Q+W L  +D   A+L   + +E+++E+P  Y    E+P +   V +L K++YGL QA R WN K+TT +   GF QS++D  +F  K   GD IA+++ YVDD+LI++  ++  ++      S+ KLKDL   +Y++
Sbjct:    2 DIELKALEDNGTWSIVQLPSNCHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSPVVRQTTVRMFFALAATQNWRLSQLDINNAFLNGELTEEVYMELPQGYTIKGEYPTSSRLVCKLHKSLYGLKQASRAWNSKLTTSVLKYGFKQSNSDYSLFIMKTHRGDFIALLV-YVDDILIASTSIQAENDVKGYLSSEFKLKDLRKVKYFL 220          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 159 bits (402), Expect = 7.380e-41
Identity = 84/235 (35.74%), Postives = 140/235 (59.57%), Query Frame = 1
Query:   34 EPKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYREFPGAVGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVF-HKIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            EP++  EAQASP+W  W+ A + +   L   G W   + PK++  V    +++RK +++G+V KYK RLVA G  QI G+ + E  +P     SI+ +L+LA + +WE+  +D + AYL   + +EI++  P  + +  G + RL K +YGL Q+GR WN K+  +LT  G+ +   DPCV+  +  +G+V  +I ++VDDLL+ T   K+M+E   D +   ++ DLG+ +  +
Sbjct:  906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEV-QIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIV 1139          
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Match: UPI002025788D (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025788D)

HSP 1 Score: 158 bits (399), Expect = 8.610e-41
Identity = 83/236 (35.17%), Postives = 138/236 (58.47%), Query Frame = 1
Query:   34 EPKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPAPAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYREFPGA--VGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFHKIVDGDVIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI 735
            EP N++EA A P  + W  A + ++  + +N  WT  + P ++  +    I+K+K D DG V  YK RLVA G RQ++G+ Y E  SP     S++ ML++AA  D+E+  +D + A+L   + +E+++  P  + +   A  V +L ++IYGLVQA R WN++    + A GF Q++ + CV+ K V G  +A +I+YVDD+L+    ++++D   A       +KDLG+A Y +
Sbjct:  191 EPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKK-VSGSSVAFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYIL 425          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46511.11605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC6.340e-4739.42Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A0V0IXE8_SOLCH3.990e-4338.24Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]
A0A507FH27_9FUNG7.340e-4338.03DNA-directed DNA polymerase n=1 Tax=Chytriomyces c... [more]
A0A7D9DFN2_PARCT1.520e-4235.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00202464352.610e-4236.02hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]
UPI00202402603.260e-4234.75hypothetical protein n=1 Tax=Proteus mirabilis Tax... [more]
UPI002025A47D1.100e-4135.17hypothetical protein n=1 Tax=Proteus mirabilis Tax... [more]
UPI00084940231.840e-4138.18uncharacterized mitochondrial protein AtMg00810 n=... [more]
A0A401GYH9_9APHY7.380e-4135.74Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
UPI002025788D8.610e-4135.17hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46511contigH-paniculata_contig46511:173..907 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score158.3
Seed ortholog evalue4.6e-36
Seed eggNOG ortholog28532.XP_010532348.1
Preferred nameUSP
KEGG rclassRC00002
KEGG koko:K12447
KEGG ReactionR00289,R00502,R01381,R03077,R08845
KEGG Pathwayko00040,ko00052,ko00053,ko00520,ko01100,ko01130,map00040,map00052,map00053,map00520,map01100,map01130
KEGG ModuleM00014
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003983,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006011,GO:0006082,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009225,GO:0009226,GO:0009555,GO:0009987,GO:0010035,GO:0010038,GO:0010491,GO:0016740,GO:0016772,GO:0016779,GO:0017103,GO:0018130,GO:0019438,GO:0019752,GO:0032501,GO:0032502,GO:0033356,GO:0034641,GO:0034654,GO:0042221,GO:0042995,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046398,GO:0046483,GO:0046686,GO:0047338,GO:0047350,GO:0048229,GO:0048856,GO:0050896,GO:0051748,GO:0052573,GO:0055086,GO:0070569,GO:0071704,GO:0090406,GO:0120025,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576
EggNOG free text desc.udp-sugar
EggNOG OGs37MVU@33090,3GGIU@35493,3HSQP@3699,COG2801@1,COG4284@1,KOG0017@2759,KOG2388@2759
EC2.7.7.64
COG Functional cat.M
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size735
Cds size735
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930388.1022675-CDS-H-paniculata_contig46511:172..9071622930388.1022675-CDS-H-paniculata_contig46511:172..907Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46511 173..907 -
1691481268.9514658-CDS-H-paniculata_contig46511:172..9071691481268.9514658-CDS-H-paniculata_contig46511:172..907Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46511 173..907 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46511.11605.1prot_H-paniculata_contig46511.11605.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig46511 173..907 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig46511.11605.1

>prot_H-paniculata_contig46511.11605.1 ID=prot_H-paniculata_contig46511.11605.1|Name=mRNA_H-paniculata_contig46511.11605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp
MSEELRGDLPVEPKNHQEAQASPQWEHWQTAEEVKMQGLIDNGAWTQVER
PKNKLVVSTMMIYKRKLDEDGEVEKYKCRLVAHGNRQIKGIHYQEASSPA
PAAASIKRMLSLAAIQDWELRHVDFEQAYLQAPIDQEIFVEIPVKYREFP
GAVGRLDKAIYGLVQAGRCWNMKVTTDLTAKGFDQSHTDPCVFHKIVDGD
VIAVIIMYVDDLLISTKGLKIMDESLADPRSDRKLKDLGDARYYI
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mRNA from alignment at H-paniculata_contig46511:173..907-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig46511.11605.1 ID=mRNA_H-paniculata_contig46511.11605.1|Name=mRNA_H-paniculata_contig46511.11605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=735bp|location=Sequence derived from alignment at H-paniculata_contig46511:173..907- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCGAAGAACTGAGGGGCGACCTCCCCGTGGAGCCCAAGAATCACCA GGAGGCGCAGGCGTCGCCGCAGTGGGAACACTGGCAAACAGCGGAGGAAG TCAAGATGCAAGGCCTAATCGACAACGGGGCTTGGACGCAAGTGGAGCGC CCGAAGAACAAGCTGGTCGTGAGCACGATGATGATCTACAAAAGAAAACT CGACGAGGACGGCGAAGTGGAGAAATATAAGTGCCGCCTGGTCGCCCACG GAAACCGTCAGATCAAGGGCATCCACTACCAGGAAGCTTCGTCCCCTGCA CCCGCAGCGGCCAGCATAAAAAGGATGTTGTCGCTTGCGGCAATCCAGGA CTGGGAGCTACGGCACGTCGACTTTGAACAAGCGTACCTGCAGGCGCCCA TCGACCAGGAGATTTTTGTTGAGATTCCCGTAAAATACCGCGAGTTTCCA GGAGCGGTGGGGCGCCTCGACAAGGCAATCTACGGATTGGTGCAAGCCGG CAGATGCTGGAATATGAAGGTTACCACGGACCTCACGGCGAAAGGGTTCG ACCAATCGCACACCGACCCGTGTGTGTTCCACAAGATCGTGGACGGGGAC GTGATCGCAGTGATCATCATGTACGTAGATGACCTACTGATCAGCACAAA GGGACTCAAGATCATGGACGAGTCGCTGGCAGACCCGCGATCGGATCGCA AGCTCAAAGACCTGGGAGATGCAAGGTACTATATA
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Coding sequence (CDS) from alignment at H-paniculata_contig46511:173..907-

>mRNA_H-paniculata_contig46511.11605.1 ID=mRNA_H-paniculata_contig46511.11605.1|Name=mRNA_H-paniculata_contig46511.11605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig46511:173..907- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCGAAGAACTGAGGGGCGACCTCCCCGTGGAGCCCAAGAATCACCA
GGAGGCGCAGGCGTCGCCGCAGTGGGAACACTGGCAAACAGCGGAGGAAG
TCAAGATGCAAGGCCTAATCGACAACGGGGCTTGGACGCAAGTGGAGCGC
CCGAAGAACAAGCTGGTCGTGAGCACGATGATGATCTACAAAAGAAAACT
CGACGAGGACGGCGAAGTGGAGAAATATAAGTGCCGCCTGGTCGCCCACG
GAAACCGTCAGATCAAGGGCATCCACTACCAGGAAGCTTCGTCCCCTGCA
CCCGCAGCGGCCAGCATAAAAAGGATGTTGTCGCTTGCGGCAATCCAGGA
CTGGGAGCTACGGCACGTCGACTTTGAACAAGCGTACCTGCAGGCGCCCA
TCGACCAGGAGATTTTTGTTGAGATTCCCGTAAAATACCGCGAGTTTCCA
GGAGCGGTGGGGCGCCTCGACAAGGCAATCTACGGATTGGTGCAAGCCGG
CAGATGCTGGAATATGAAGGTTACCACGGACCTCACGGCGAAAGGGTTCG
ACCAATCGCACACCGACCCGTGTGTGTTCCACAAGATCGTGGACGGGGAC
GTGATCGCAGTGATCATCATGTACGTAGATGACCTACTGATCAGCACAAA
GGGACTCAAGATCATGGACGAGTCGCTGGCAGACCCGCGATCGGATCGCA
AGCTCAAAGACCTGGGAGATGCAAGGTACTATATAATGTCCGAAGAACTG
AGGGGCGACCTCCCCGTGGAGCCCAAGAATCACCAGGAGGCGCAGGCGTC
GCCGCAGTGGGAACACTGGCAAACAGCGGAGGAAGTCAAGATGCAAGGCC
TAATCGACAACGGGGCTTGGACGCAAGTGGAGCGCCCGAAGAACAAGCTG
GTCGTGAGCACGATGATGATCTACAAAAGAAAACTCGACGAGGACGGCGA
AGTGGAGAAATATAAGTGCCGCCTGGTCGCCCACGGAAACCGTCAGATCA
AGGGCATCCACTACCAGGAAGCTTCGTCCCCTGCACCCGCAGCGGCCAGC
ATAAAAAGGATGTTGTCGCTTGCGGCAATCCAGGACTGGGAGCTACGGCA
CGTCGACTTTGAACAAGCGTACCTGCAGGCGCCCATCGACCAGGAGATTT
TTGTTGAGATTCCCGTAAAATACCGCGAGTTTCCAGGAGCGGTGGGGCGC
CTCGACAAGGCAATCTACGGATTGGTGCAAGCCGGCAGATGCTGGAATAT
GAAGGTTACCACGGACCTCACGGCGAAAGGGTTCGACCAATCGCACACCG
ACCCGTGTGTGTTCCACAAGATCGTGGACGGGGACGTGATCGCAGTGATC
ATCATGTACGTAGATGACCTACTGATCAGCACAAAGGGACTCAAGATCAT
GGACGAGTCGCTGGCAGACCCGCGATCGGATCGCAAGCTCAAAGACCTGG
GAGATGCAAGGTACTATATA
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