prot_H-paniculata_contig4622.11547.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4622.11547.1
Unique Nameprot_H-paniculata_contig4622.11547.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length130
Homology
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR)

HSP 1 Score: 83.6 bits (205), Expect = 3.870e-16
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 0
Query:    2 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  PE + +  +P  V  LN +IY   QA RCWN++  + +K  G
Sbjct:  510 VGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRFDQKIKEFG 637          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6LS40_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LS40_9ASTR)

HSP 1 Score: 82.4 bits (202), Expect = 9.850e-16
Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 0
Query:    2 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +P  V  LN +IY   QA RCWN++  + +K  G
Sbjct:  790 VGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVYKLNKSIYGLKQASRCWNLRFDQKIKEFG 917          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6MMD4_9ASTR (Uncharacterized protein n=6 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MMD4_9ASTR)

HSP 1 Score: 82.4 bits (202), Expect = 1.000e-15
Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 0
Query:    2 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +P  V  LN +IY   QA RCWN++  + +K  G
Sbjct:  843 VGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRVLLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVCKLNKSIYGLKQASRCWNLRFDQKIKEFG 970          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6LHI8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LHI8_9ASTR)

HSP 1 Score: 80.1 bits (196), Expect = 6.130e-15
Identity = 42/128 (32.81%), Postives = 68/128 (53.12%), Query Frame = 0
Query:    2 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  PE + +  +P     LN +I+   QA RCWN++  + +K  G
Sbjct:  250 VGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDENFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPSKACKLNKSIHGLKQASRCWNLRFDQKIKEFG 377          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6L9X5_9ASTR (Uncharacterized protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6L9X5_9ASTR)

HSP 1 Score: 80.1 bits (196), Expect = 6.220e-15
Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 0
Query:    3 GTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            G+K ++ R+ + HG V  YK + VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +P  V  LN +IY   QA RCWN++  + +K  G
Sbjct:  647 GSKWIFKRKTDMHGNVHTYKAQLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVCKLNKSIYGLKQASRCWNLRFDQKIKEFG 773          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6PRY2_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A5N6PRY2_9ASTR)

HSP 1 Score: 79.7 bits (195), Expect = 8.830e-15
Identity = 42/128 (32.81%), Postives = 68/128 (53.12%), Query Frame = 0
Query:    2 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +P  V  L  +IY   QA RCWN++  + +K  G
Sbjct:  375 VGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPIAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVCKLKKSIYGLKQASRCWNLRFDQKIKEFG 502          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A1W7R6G9_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6G9_AEDAL)

HSP 1 Score: 77.8 bits (190), Expect = 4.070e-14
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 0
Query:    2 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE-FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            +G K +Y R+ +  G V +YK R VAQGF Q     Y+    P     ++R  L+  A   + ++H D   AYL  +++  +Y+  P  ++    G V  L  ++Y   QAGR WN K+TE L++LG
Sbjct:  583 VGCKWVYKRKTDGDGNVIQYKARLVAQGFSQRYGTDYDEVFAPVAKQTTVRTLLSIAARRKLQVKHVDVKSAYLYGELEETIYMRQPTGFQTGAKGDVCLLRKSLYGLKQAGRIWNRKITEVLRSLG 709          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A251T958_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T958_HELAN)

HSP 1 Score: 77.8 bits (190), Expect = 4.140e-14
Identity = 41/128 (32.03%), Postives = 68/128 (53.12%), Query Frame = 0
Query:    2 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            +G+K ++ R+ + HG +  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +P  V  LN +IY   QA R WN++  + +K  G
Sbjct:  844 VGSKWVFKRKTDMHGNIQTYKARLVAKGFTQTQGIDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPNRVCKLNKSIYGLKQASRSWNLRFDQKVKEFG 971          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6NIT2_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NIT2_9ASTR)

HSP 1 Score: 73.2 bits (178), Expect = 1.630e-12
Identity = 40/128 (31.25%), Postives = 66/128 (51.56%), Query Frame = 0
Query:    2 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +        SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +   V  LN +IY   QA  CWN++  + +K  G
Sbjct:  304 VGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSLVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYSSKVCKLNKSIYGLKQASSCWNLRFDQKIKEFG 431          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A4Y2JF47_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2JF47_ARAVE)

HSP 1 Score: 72.4 bits (176), Expect = 3.050e-12
Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 0
Query:    1 MLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYREF--PGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLG 127
            ++ +K +YS +  ++GE  KYK R VA GF QIK   Y     P     S R+ +A  + +++ +R FD   AYL +DI+  +Y+  P  +      G V  L  +IY   Q+GR W +K+  +L+  G
Sbjct:  344 LVKSKWVYSLKPSDNGET-KYKARLVAAGFNQIKNKDYLEPYSPVVNIESFRLLIALASKLNLMVRFFDVQTAYLYSDIEETVYMLPPSGFERLVGDGKVCKLKRSIYGLPQSGRNWYMKIKSELEKFG 471          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N6LW24_9ASTR3.870e-1634.38Integrase catalytic domain-containing protein n=2 ... [more]
A0A5N6LS40_9ASTR9.850e-1633.59Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A5N6MMD4_9ASTR1.000e-1533.59Uncharacterized protein n=6 Tax=Mikania micrantha ... [more]
A0A5N6LHI8_9ASTR6.130e-1532.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6L9X5_9ASTR6.220e-1533.07Uncharacterized protein n=2 Tax=Mikania micrantha ... [more]
A0A5N6PRY2_9ASTR8.830e-1532.81Integrase catalytic domain-containing protein n=2 ... [more]
A0A1W7R6G9_AEDAL4.070e-1433.86Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
A0A251T958_HELAN4.140e-1432.03Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A5N6NIT2_9ASTR1.630e-1231.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y2JF47_ARAVE3.050e-1233.33Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..127
e-value: 2.3E-21
score: 76.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4622contigH-paniculata_contig4622:6801..7190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4622.11547.1mRNA_H-paniculata_contig4622.11547.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4622 6788..7486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4622.11547.1 ID=prot_H-paniculata_contig4622.11547.1|Name=mRNA_H-paniculata_contig4622.11547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
MLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAAS
IRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYREFPGAVGW
LNNAIYRPVQAGRCWNVKLTEDLKTLGSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2