prot_H-paniculata_contig4620.11543.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4620.11543.1
Unique Nameprot_H-paniculata_contig4620.11543.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length159
Homology
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BLAST of mRNA_H-paniculata_contig4620.11543.1 vs. uniprot
Match: D8LMX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX1_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 1.250e-32
Identity = 93/144 (64.58%), Postives = 101/144 (70.14%), Query Frame = 0 
Query:   18 AREAERLRSEVAEAKQRRTELQRVHREASTRFQKETRQLHLNEARMRRDGERMQWQVKKLQESQNKTQAALKRKMEEHSMAMRKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DVKEAKKSELTTWLAAEIEEASAVQRAK 159
            A+EAERLR         R ELQR HREASTRF KETRQLHL +ARMRRDGERMQWQVKKLQESQ +TQAALKRKMEEHSMAM+K+                 XXXXXXX        VKEAKK+E+  WLA EIEE +AVQRAK
Sbjct:  825 AKEAERLRXXXXXXXXXRAELQRTHREASTRFMKETRQLHLKDARMRRDGERMQWQVKKLQESQERTQAALKRKMEEHSMAMKKVRTLQSHRTGGRGGIGDGXXXXXXXRGDARHPSVKEAKKAEMEAWLATEIEEDTAVQRAK 968
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BLAST of mRNA_H-paniculata_contig4620.11543.1 vs. uniprot
Match: A0A6H5K591_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K591_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 8.880e-24
Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 0 
Query:   51 KETRQLHLNEARMRRDGERMQWQVKKLQESQNKTQAALKRKMEEHSMAMRKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DVKEAKKSELTTWLAAEIEEASAVQRAK 159
            KETRQLHL +ARMRRDGERMQWQVKKLQESQ +TQAALKRKMEEHSMAM+K+                  XXXXXX        VKEAKK+E+  WLA EIEE +AVQRAK
Sbjct:    2 KETRQLHLKDARMRRDGERMQWQVKKLQESQERTQAALKRKMEEHSMAMKKVRALQSHRTGGRGGIGDGAXXXXXXRGDARHPSVKEAKKAEMEAWLATEIEEDTAVQRAK 112
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BLAST of mRNA_H-paniculata_contig4620.11543.1 vs. uniprot
Match: A0A835YYL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.270e-15
Identity = 72/155 (46.45%), Postives = 100/155 (64.52%), Query Frame = 0 
Query:   12 KERAVAAREAERLRSEVAEAKQRRTELQRVHREASTRFQKETRQLHLNEARMRRDGERMQWQVKKLQESQNKTQAALKRKMEEHSMAMRKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-------VKEAKKSELTTWLAAEIEEASAVQRAK 159
            +ERA A REAERLR+EV EAK+RR  LQ+   + +   ++E  +  +  AR RR GER+QW+V+KLQE+  KTQA+L+RKMEEH+ A+RK+                  XXXXXXXXXXX        ++ A++ EL +W A  +EEA+A+QRA+
Sbjct:  729 RERAEACREAERLRAEVEEAKRRRAGLQKQMADDAAAHRRERHEAAVAAARGRRQGERLQWEVRKLQEAHAKTQASLRRKMEEHAAAIRKLRALTSNGRAPSAMDKSTSXXXXXXXXXXXXXXXXXXXMQVARRQELESWCAHLVEEAAALQRAR 883
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4620.11543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMX1_ECTSI1.250e-3264.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K591_9PHAE8.880e-2464.86SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YYL2_9STRA9.270e-1546.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..108
NoneNo IPR availableCOILSCoilCoilcoord: 7..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4620contigH-paniculata_contig4620:7700..12480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4620.11543.1mRNA_H-paniculata_contig4620.11543.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4620 7700..12480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4620.11543.1 ID=prot_H-paniculata_contig4620.11543.1|Name=mRNA_H-paniculata_contig4620.11543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
RKKVAEHQRAEKERAVAAREAERLRSEVAEAKQRRTELQRVHREASTRFQ
KETRQLHLNEARMRRDGERMQWQVKKLQESQNKTQAALKRKMEEHSMAMR
KMRKLETQKLKGARGGGGGSDGMAGAGPSDPDVKEAKKSELTTWLAAEIE
EASAVQRAK
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