prot_H-paniculata_contig4602.11512.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4602.11512.1
Unique Nameprot_H-paniculata_contig4602.11512.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
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BLAST of mRNA_H-paniculata_contig4602.11512.1 vs. uniprot
Match: A0A6H5K5A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A9_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.840e-7
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:   23 LKQEPYIMLVHARNQQNAD--------GSGKKGVVP------FCSDCLGNCKGTCSPSG 67
            L +EPY+MLV AR++ + +        GS KK V        FCSDC+G CKGTCSP G
Sbjct:  111 LGREPYLMLVRARSRSSLEQELSSRGGGSNKKSVASTNISARFCSDCVGGCKGTCSPDG 169
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BLAST of mRNA_H-paniculata_contig4602.11512.1 vs. uniprot
Match: D7FH18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH18_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.560e-6
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:   23 LKQEPYIMLVHARNQQNAD--------GSGKKGVVP------FCSDCLGNCKGTCSPSG 67
            L +EPY+MLV AR++ + +        GS KK V        FCSDC+G CKGTCSP G
Sbjct:  821 LGREPYLMLVRARSRYSLEQELSSRGGGSNKKFVASTSICARFCSDCVGGCKGTCSPDG 879
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4602.11512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5A9_9PHAE1.840e-747.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH18_ECTSI1.560e-647.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4602contigH-paniculata_contig4602:11575..11790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4602.11512.1mRNA_H-paniculata_contig4602.11512.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4602 11472..11869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4602.11512.1 ID=prot_H-paniculata_contig4602.11512.1|Name=mRNA_H-paniculata_contig4602.11512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
MGVTTKVSQSEERSEGGMKEQMLKQEPYIMLVHARNQQNADGSGKKGVVP
FCSDCLGNCKGTCSPSGELRY*
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