prot_H-paniculata_contig45943.11496.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45943.11496.1
Unique Nameprot_H-paniculata_contig45943.11496.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length218
Homology
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU)

HSP 1 Score: 167 bits (424), Expect = 3.340e-44
Identity = 100/238 (42.02%), Postives = 130/238 (54.62%), Query Frame = 0
Query:    1 RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVIAGR-REKVDEFKQ----HYRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTPAEEKVKISAPD-------------GNSTEYNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITF-GSKSNGH-GLEGFVDVDWA 218
            RL++SLYGLKQ+GR WN  LD  L G+G +R  +++C Y  RDD G+  FLV VYVDDL++A   R  +DE K+     ++M+ LG  S +LGI +RRD P   I +SQ  YI  VL RYG  +C+   TP    VK SA D             G S  Y  ++GS+MYA  GTRPDIAY V    R   +P +  +   K   RYL    D  + F GS   G     G+ D DW+
Sbjct: 1125 RLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKRCHWEMAKRGLRYLKATRDMELRFDGSDVAGDMDFHGYSDADWS 1361          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: A0A329RB64_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RB64_9STRA)

HSP 1 Score: 156 bits (394), Expect = 3.370e-43
Identity = 89/228 (39.04%), Postives = 130/228 (57.02%), Query Frame = 0
Query:    4 KSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVIA-----GRREKVDEFKQHYRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTPAEEKVKI-----SAPDGNSTEYNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITFGSKS---NGHGLEGFVDVDWA 218
            K+LYGL+QSGR WN+ L+ +L+  G  RS T+ C Y   D  G T  L+ VYVDD+++A     G++   D+    Y +K  G L++ LGIEV +   + ++TI+Q  Y  E+L+ +G+ +   V  P E KVK+     S     S EY   VG LMY +TGTRPD+A+AV Q +R +  P  +   T K + RYL+    +GIT+   +   +   LEG+ D DWA
Sbjct:   57 KALYGLRQSGREWNSELNQWLLDRGYQRSMTEPCLYYRFD--GNTTMLILVYVDDIMVATNEEEGKKILFDDLDTAYGIKDQGLLTQYLGIEVAQT--DDSVTINQSKYAHEILETFGYSQAHAVGNPMETKVKLVPLGESEDADTSFEYRKAVGMLMYLATGTRPDLAFAVEQLSRFVAKPSAKHVGTLKRILRYLAGTVGYGITYERANEVPSSVALEGYCDSDWA 280          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 159 bits (401), Expect = 3.480e-43
Identity = 91/233 (39.06%), Postives = 133/233 (57.08%), Query Frame = 0
Query:    1 RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVI-AGRREKVDEFKQH----YRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTP----AEEKV----KISAPDGNST--EYNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITFGSKSNGHGLEGFVDVDWA 218
            RL+KS+YGL QSGR+WN   D  +  +GL ++  D+C Y    DG +    V V+VDDL+I A  +++ +  ++     + MK +G   +++GIEV RD    T+T+SQ  YI  +L RYGF     V TP    A  K+    K + P   S   EY  M+G LMYA+  TRPDIAYAV + ++   +P  E    CK +FRYLS   ++G+ +G + +G   EG+ D D+A
Sbjct:   33 RLKKSIYGLHQSGRDWNREFDRKVQSVGLTKTAADNCVYYRERDGEQV--WVTVWVDDLIILATSKDEGERVRKELGTLFEMKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPPAAPSVRAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQRDGVVFEGYCDADYA 263          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 4.310e-42
Identity = 93/226 (41.15%), Postives = 129/226 (57.08%), Query Frame = 0
Query:    1 RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVIAGR-REKVDEFKQ----HYRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTPAEEKV-KISAPDGN-STEYNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITF-GSKSNGHGLEGFVDVDWA 218
            RLRKSLYGLKQSGRNW+  +D +  G G   S+ D C Y      GE   ++ +YVDDL+I    RE VD+FKQ     + MK L  L  +LG+ ++R+     + ISQ +YI  VL ++G  +CR VLTP E  + K+   D     EY  +VGSL+YA+  TRPDIA+AV    + ++   +E +   K + RYL    D GI + G+ +    L GF D D+A
Sbjct:  349 RLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTPMEGTLTKMDGKDAKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYA 573          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL)

HSP 1 Score: 157 bits (398), Expect = 4.780e-42
Identity = 92/233 (39.48%), Postives = 129/233 (55.36%), Query Frame = 0
Query:    1 RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVI-AGRREKVDEFKQH----YRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTP----AEEKVKISAPDGNST------EYNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITFGSKSNGHGLEGFVDVDWA 218
            RL+KSLYGL QSGR WN   D  +  IGL ++  D+C Y    DG      V V+VDDL+I A  +++ +  K+     + MK LG   +++GIEV RD    T+T+SQ  YI  +L RYGF +   V TP    A  K++    D   T      EY  M+G LMYA+  TRPDIAYAV + ++   +P  E    CK +F YLS   D+G+ +G + +    EG+ D ++A
Sbjct:  118 RLKKSLYGLHQSGREWNREFDQKVQTIGLTKTAADNCVYYRERDGERV--WVTVWVDDLIILATSKDEGERVKKELDTLFEMKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTPLVPDANTKMRQLPKDAPPTAPSARAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFHYLSGTRDYGLVYGLQRDAVVFEGYCDANYA 348          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 160 bits (404), Expect = 6.340e-42
Identity = 91/228 (39.91%), Postives = 132/228 (57.89%), Query Frame = 0
Query:    1 RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVIAGRRE-KVDEFKQ----HYRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTPAEE--KVKISAPDGNSTE---YNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITFGSKSNGHGLEGFVDVDWA 218
            RLR+S+YGLKQS R WN+VLD  L  +G  ++T D C Y  +++GGE  F++AVYVDD+++AG+ + K++E KQ     ++MK +G L   LG++V     +  I I Q +Y + VL+R+G +  +   TP     K+K +A D    +   Y   VG L+Y ST TRPDIAYAV   AR   DP +E +   K + RYL+   D G+ +          G+ D DWA
Sbjct:  126 RLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWA 351          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: UPI001C35AD5A (Uncharacterized protein n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI001C35AD5A)

HSP 1 Score: 155 bits (391), Expect = 1.030e-41
Identity = 85/227 (37.44%), Postives = 121/227 (53.30%), Query Frame = 0
Query:    2 LRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVI-AGRREKVDEFKQH----YRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTPAEEKVKISAPDGNSTE------YNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITFGSKSNGHGLEGFVDVDW 217
            L+KSLYGLKQ+ R WN  LD  L  IGL +S  D C Y    +   T   VAVYVDD+++   R E  +  K H    + MK LG L   LG+ + RD  N  + + Q  YI ++L +YG   C+ V TP + K K+S  D N         Y  ++GSL+Y S  TRPDI+Y+V+  ++    P  + +   K + RYL    ++ +T+  K +  G+ GF D DW
Sbjct:   34 LKKSLYGLKQASRQWNQKLDKTLKEIGLKQSLLDPCIYYKIRNEDIT--FVAVYVDDIILLTSRLETKNYIKNHLSSKFEMKDLGELKYCLGLHIHRDRNNGILCVDQKRYIEDILSKYGMSNCKTVRTPIDPKTKLSNDDENGDSIVDSHLYQELIGSLLYLSQSTRPDISYSVNTLSKFNSKPNMQHWMALKRILRYLKLTVNYTLTY--KKDDKGIHGFCDADW 256          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: H3H910_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H910_PHYRM)

HSP 1 Score: 150 bits (380), Expect = 2.310e-41
Identity = 81/233 (34.76%), Postives = 128/233 (54.94%), Query Frame = 0
Query:    1 RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVIAGRREKVDEFKQH-----YRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTPAEEKVKIS---APDGNSTE-------YNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITFGSKSNGHGLEGFVDVDWA 218
            +L++SLYGLKQS R WN  +D+F++ +G  +  +D C Y  RD  G+    VA+YVDDLV+A   +++ E  +H     + M  LG L   LG+E++ D  +  +T+ Q  +++ +L ++G  + + V TP +  +K++     DG   E       Y   VG+LMY    TRPD+A AV   ++   DPC   ++  K + RYL   P  G+ F S+    G+ G+ D DWA
Sbjct:   18 KLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALCKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEDGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEF-SREASLGMCGYSDADWA 247          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: A0A443S3D3_9ACAR (Integrase core domain protein-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443S3D3_9ACAR)

HSP 1 Score: 155 bits (392), Expect = 3.940e-41
Identity = 88/225 (39.11%), Postives = 128/225 (56.89%), Query Frame = 0
Query:    1 RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVIAGRREK-----VDEFKQHYRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTPAEEKVKISAPDGNSTE--YNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITFGSKSNGHGLEGFVDVDWA 218
            RL+KSLYGLKQ+ R WN   ++FL   GL RS  DSC Y S D    T  ++ +YVDD ++A    K     V   K  + M  +G L+  LG++V R      + ++Q SYI+++L +YG  +C+ V TP +  VK++  +  S E  Y  +VGSLMYA  G+RPDI YAV + A+ ++   +  +   K + RYL   P  GITF + S+   L G+ D D+A
Sbjct:  249 RLQKSLYGLKQAPRQWNEKFNSFLEKFGLTRSKADSCVYVSNDHQVIT--ILGIYVDDGLLASSSLKMINDIVTFLKNQFEMS-VGKLNSFLGLQVIRHRKEKLLNVNQESYIQKMLNKYGMTDCKSVKTPMDATVKLTKSESKSCEFSYRELVGSLMYAMLGSRPDICYAVGKLAQFLDCYDETHWTAAKRVLRYLKGTPKHGITFNANSSSPNLYGYCDADYA 470          
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Match: A0A2G2W4T7_CAPBA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W4T7_CAPBA)

HSP 1 Score: 158 bits (400), Expect = 5.530e-41
Identity = 89/233 (38.20%), Postives = 133/233 (57.08%), Query Frame = 0
Query:    1 RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDFLVAVYVDDLVIAGR-REKVDEFK----QHYRMKGLGSLSRVLGIEVRRDSPNSTITISQGSYIREVLQRYGFDECRRVLTPAEEKVKISAPDGNSTE----------YNGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITFG-SKSNGHGLEGFVDVDW 217
            RL+KSLYGLKQS R W    D+F+ G G  RS+ D+C Y  +   G   +L+ +YVDD++IA R +  VD+ K      + MK LG   ++LG+E+ RD     + +SQ  Y+ ++L R+G  +C+ V TP     K+S+     +E          Y+  VGSLMYA   TRPD+AYAV   +R M +P ++ + + K + RYL   PD G+ F   +S+  G+ G+VD D+
Sbjct:  616 RLKKSLYGLKQSPRQWYKRFDSFMTGHGYSRSSYDNCVYFQKLSDGSLVYLL-LYVDDMLIAARDKTLVDKLKVQLNSEFDMKDLGPAKKILGMEINRDRQAGKLFLSQKKYVMKMLDRFGMRDCKAVNTPLAAHFKLSSDQCPQSEEEQRRMSHVPYSNAVGSLMYAMVCTRPDLAYAVSVVSRFMHNPGKQHWESVKWILRYLKGSPDIGLVFDRQRSDPGGVVGYVDADY 847          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45943.11496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M2VT18_TRAPU3.340e-4442.02Retrovirus-related Pol polyprotein from transposon... [more]
A0A329RB64_9STRA3.370e-4339.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A146H7K8_MYCCL3.480e-4339.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
W7TIM1_9STRA4.310e-4241.15Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
A0A146H3U8_MYCCL4.780e-4239.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9KES8_PARCT6.340e-4239.91Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI001C35AD5A1.030e-4137.44Uncharacterized protein n=1 Tax=Manduca sexta TaxI... [more]
H3H910_PHYRM2.310e-4134.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A443S3D3_9ACAR3.940e-4139.11Integrase core domain protein-like protein (Fragme... [more]
A0A2G2W4T7_CAPBA5.530e-4138.20Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..127
e-value: 2.1E-25
score: 89.8
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 2..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45943contigH-paniculata_contig45943:661..1404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45943.11496.1mRNA_H-paniculata_contig45943.11496.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45943 661..1404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45943.11496.1 ID=prot_H-paniculata_contig45943.11496.1|Name=mRNA_H-paniculata_contig45943.11496.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
RLRKSLYGLKQSGRNWNNVLDNFLVGIGLDRSTTDSCFYSSRDDGGETDF
LVAVYVDDLVIAGRREKVDEFKQHYRMKGLGSLSRVLGIEVRRDSPNSTI
TISQGSYIREVLQRYGFDECRRVLTPAEEKVKISAPDGNSTEYNGMVGSL
MYASTGTRPDIAYAVHQAARRMEDPCQEDFRTCKCMFRYLSTVPDFGITF
GSKSNGHGLEGFVDVDWA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2