prot_H-paniculata_contig4588.11486.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4588.11486.1
Unique Nameprot_H-paniculata_contig4588.11486.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length201
Homology
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: D7FW75_ECTSI (Similar to thioredoxin-like protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW75_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 9.620e-46
Identity = 90/167 (53.89%), Postives = 115/167 (68.86%), Query Frame = 0
Query:   11 LTLLSVLSSSDAFLCARRCSQ--QPSSCRPYLPPTLQITQDSVRAEGLVPSLAVRGGGGNVQQVATLAELETILEISGDAIVCVEFTAAWCAPCQQIAPAFEALSLELENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQGLLEEG 175
            L +LS+ S  DAF+  R  S    P++ R       ++  DS       P + +RGGGG VQQVAT  ELE ++  S  A+V ++FTA WC PCQ+I+P FE LS EL +V FLKVDVD+NEETAQKY+V QMPTFL +RKGEVVDQFSGA+VAMLR+K++ L  +G
Sbjct:   10 LAVLSLFSRDDAFVVRRSLSSAYNPAAGRRS---KHEVIFDSRWNRDSPPVVNLRGGGGQVQQVATQEELEQVISNSNGALVVIDFTATWCGPCQKISPVFELLSQELTDVVFLKVDVDENEETAQKYDVVQMPTFLFMRKGEVVDQFSGASVAMLREKIEALRGDG 173          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: K8YVK2_NANGC (Thioredoxin-1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YVK2_NANGC)

HSP 1 Score: 114 bits (285), Expect = 1.200e-28
Identity = 78/166 (46.99%), Postives = 101/166 (60.84%), Query Frame = 0
Query:   11 LTLLSVLSSSDAFLCARRCSQQPSSCRPYLPPTLQITQDSVRAEGLVPSLA-VRGG-GGNVQQVATLAELETILEISGDAIVCVEFTAAWCAPCQQIAPAFEALSLEL-ENVA-FLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQGLL 172
            L  L V++S+ AF  A   S  PSS    LP   Q  Q+  R +  +  LA +RGG  G V +V TL E E  L  +G  +V ++FTA WC PC+ I+P FE LS E+ EN A FLKVDVD NEETA+K+EV+QMPTF+ ++  EV  +  GAN   LR+ V  LL
Sbjct:    7 LLFLIVIASTTAFHTAPWAS--PSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPTFIFVKNSEVKGRLVGANPDKLREAVFRLL 170          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: A0A834Y2Y2_9HYME (Thioredoxin domain-containing protein n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834Y2Y2_9HYME)

HSP 1 Score: 107 bits (266), Expect = 1.350e-26
Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 0
Query:   69 VQQVATLAELETILEISGDAIVCVEFTAAWCAPCQQIAPAFEALSLELENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQ 169
            VQ +  L  LE I+  +GD ++ ++F A WC PC+ IAP +E LS E  NV FLKVDVDDNEE A KYE++ MPTF+ I+  +VV QF+GA++  L+  +Q
Sbjct:    2 VQVIEGLPSLEKIIAEAGDKLIVIDFFATWCGPCKMIAPKYEELSKENTNVVFLKVDVDDNEEIAIKYEISSMPTFVFIKNNQVVHQFAGASLDKLKDSIQ 102          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: A0A7S2A724_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A724_TRICV)

HSP 1 Score: 109 bits (272), Expect = 2.040e-26
Identity = 64/157 (40.76%), Postives = 96/157 (61.15%), Query Frame = 0
Query:   15 SVLSSSDAFLCARRCSQQPSSCRPYLPPTLQITQDSVRAEGLVPSLAVRGGGGNVQQVATLAELETIL-EISGDA-IVCVEFTAAWCAPCQQIAPAFEALSLELENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQ 169
            SV  S+  F      ++ PS+ +P    +   T   +    LV S AV   GG V + A+L ++E +L + S +  +V ++F+A WC PC+ IAP F  LS ++E+V FLKVDVD+N +TA KY V+ MPTF+ I+ GEVVD+  GAN A L++ ++
Sbjct:   36 SVALSALLFAVTSGAARPPSAKQPQCAESAAPTTFGLPQSRLVSSPAVTLRGGEVAEPASLDDVEAVLLKASAEGKLVVIDFSATWCGPCKMIAPIFHELSEQMESVVFLKVDVDENPDTAAKYSVSAMPTFVFIKGGEVVDRLMGANPARLKEMIE 192          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: A0A6U0UC80_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UC80_9STRA)

HSP 1 Score: 108 bits (270), Expect = 8.450e-26
Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 0
Query:   65 GGGNVQQVATLAELETILEISGDAIVCVEFTAAWCAPCQQIAPAFEALSLE--LENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQ 169
            G G VQ+V TL E E IL  +G ++V V+F+A WC PC+QIAPA+  +S E   +NV FLKVDVD+N ETAQ+YEV  MPTF+ I++ E V +FSGA+   +R  ++
Sbjct:  116 GHGAVQEVDTLEEFEAILGEAGGSLVVVDFSATWCGPCRQIAPAYAEMSEEDEFDNVVFLKVDVDENAETAQEYEVQSMPTFVFIKEEEEVARFSGADAERVRSTIR 222          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: A0A4D9D8K7_9STRA (Thioredoxin domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8K7_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.430e-25
Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 0
Query:   62 VRGG-GGNVQQVATLAELETILEISGDAIVCVEFTAAWCAPCQQIAPAFEALSLEL-EN-VAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQGLL 172
            +RGG  G V +V TL E E  L  +G  +V ++FTA WC PC+ I+P FE LS E+ EN V FLKVDVD NEETA+K+EV+QMPTF+ ++  EV  +  GAN   LR+ V  LL
Sbjct:    2 IRGGVSGKVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEVVFLKVDVDVNEETAKKFEVSQMPTFIFVKNSEVKGRLVGANPDKLREAVFRLL 115          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: A0A1Z5K0J3_FISSO (Thioredoxin 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0J3_FISSO)

HSP 1 Score: 104 bits (259), Expect = 5.400e-25
Identity = 54/115 (46.96%), Postives = 78/115 (67.83%), Query Frame = 0
Query:   57 VPSLAVRGGGGNVQQVATLAELETILEISG--DAIVCVEFTAAWCAPCQQIAPAFEALSLELENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQ 169
            +P+L VRGG  +V +  TL ++E IL  +G    +V ++FTA WC PC+ I+P F  LS   ++V FLKVDVD+N +TA KY V+ MPTFL I+ GE+VD+  GAN   L++ ++
Sbjct:   35 IPALQVRGG--SVVEPDTLEDVEDILLKAGAESKLVVIDFTATWCGPCKMISPVFHELSDSFDDVVFLKVDVDENPDTAAKYNVSAMPTFLFIKGGEIVDRMMGANPTKLQELIE 147          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: UPI0013AF7373 (thioredoxin n=2 Tax=Etheostoma TaxID=54318 RepID=UPI0013AF7373)

HSP 1 Score: 102 bits (255), Expect = 6.600e-25
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 0
Query:   69 VQQVATLAELETILEISGDAIVCVEFTAAWCAPCQQIAPAFEALSLEL--ENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQGL 171
            V+ V  LAE + IL  +GD +V V+FTA WC PC+QIAPAFE  S +   +NV FLKVDVD+ E+ +   ++N MPTF+  + GE VD+FSGAN+  L +K+  L
Sbjct:    2 VRSVENLAEFKAILAEAGDKLVVVDFTATWCGPCKQIAPAFEKESKDSANKNVIFLKVDVDEAEDVSAHCKINCMPTFMFFKNGEKVDEFSGANINTLMEKLSAL 106          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: A0A7S0H9G2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H9G2_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 1.060e-24
Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 0
Query:   61 AVRGGGGNVQQVATLAELETILEISGDAIVCVEFTAAWCAPCQQIAPAFEALSLELENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKVQ 169
            ++RGG G V    + +E + +L+ +GD +V V+FTA+WC PC+ IAP FE+L     N+  LKVDVD+NEETAQ +E+  MPTF+  +KG+ +  F GA+   LR  V+
Sbjct:   45 SLRGGEGGVVYAKSKSEFDQVLKDAGDNLVVVDFTASWCGPCKMIAPFFESLKDNYPNITLLKVDVDENEETAQYFEIGAMPTFMFFKKGKKLGFFCGASEENLRANVE 153          
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Match: A0A6T7WGS0_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7WGS0_9CRYP)

HSP 1 Score: 106 bits (264), Expect = 1.220e-24
Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 0
Query:   65 GGGNVQQVATLAELETILEISGDAIVCVEFTAAWCAPCQQIAPAFEALSLELENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKGEVVDQFSGANVAMLRQKV 168
            G G++  +AT  E +  L+ +G  +V V+FTA+WC PCQQIAP F+ L+ E ++V FLKVDVD+N+ETA+   V  MPTF   R G  +D+FSGA+   LR K+
Sbjct:  138 GDGSLDMIATKEEFDAALKEAGSKLVVVDFTASWCGPCQQIAPVFKGLAQEFKDVVFLKVDVDENKETAEHCGVTSMPTFQFYRSGSKLDEFSGADEDRLRSKI 241          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4588.11486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW75_ECTSI9.620e-4653.89Similar to thioredoxin-like protein, partial n=1 T... [more]
K8YVK2_NANGC1.200e-2846.99Thioredoxin-1 n=1 Tax=Nannochloropsis gaditana (st... [more]
A0A834Y2Y2_9HYME1.350e-2650.50Thioredoxin domain-containing protein n=1 Tax=Aphi... [more]
A0A7S2A724_TRICV2.040e-2640.76Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U0UC80_9STRA8.450e-2652.34Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9D8K7_9STRA1.430e-2552.63Thioredoxin domain-containing protein n=1 Tax=Nann... [more]
A0A1Z5K0J3_FISSO5.400e-2546.96Thioredoxin 1 n=2 Tax=Fistulifera solaris TaxID=15... [more]
UPI0013AF73736.600e-2550.48thioredoxin n=2 Tax=Etheostoma TaxID=54318 RepID=U... [more]
A0A7S0H9G2_9EUKA1.060e-2445.87Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6T7WGS0_9CRYP1.220e-2449.04Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 86..166
e-value: 4.5E-24
score: 84.4
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 51..173
score: 15.017
NoneNo IPR availableGENE3D3.40.30.10coord: 59..177
e-value: 1.4E-31
score: 110.8
NoneNo IPR availablePANTHERPTHR46115:SF1THIOREDOXIN-LIKE PROTEIN 1coord: 68..187
NoneNo IPR availablePANTHERPTHR46115FAMILY NOT NAMEDcoord: 68..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.882
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 56..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4588contigH-paniculata_contig4588:8405..12105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4588.11486.1mRNA_H-paniculata_contig4588.11486.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4588 2942..13708 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4588.11486.1 ID=prot_H-paniculata_contig4588.11486.1|Name=mRNA_H-paniculata_contig4588.11486.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MAGAGTLVLVLTLLSVLSSSDAFLCARRCSQQPSSCRPYLPPTLQITQDS
VRAEGLVPSLAVRGGGGNVQQVATLAELETILEISGDAIVCVEFTAAWCA
PCQQIAPAFEALSLELENVAFLKVDVDDNEETAQKYEVNQMPTFLLIRKG
EVVDQFSGANVAMLRQKVQGLLEEGRAGGGGADQDDEEEMKEEGKGAEEE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf