mRNA_H-paniculata_contig118.1146.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: D7FMM2_ECTSI (GE20757 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM2_ECTSI) HSP 1 Score: 465 bits (1196), Expect = 1.530e-158 Identity = 225/306 (73.53%), Postives = 263/306 (85.95%), Query Frame = 2 Query: 299 RIVGF------AQHAIRPLATKAAGLRMGHSASGLLFSAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSAAACAWKSGSFASGALRPTLLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLANFSPARTVPMGVGGWACAGLFAAGLIMESVADYQKFQFKSDPKNKGKFVDSGLWSISRHPNYLGELTVWWGILGVAVPALRGPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVPDLSK 1198 R++GF A A RP +T+ GL+M SGLLFSAGVIGGANL+GF +TA TKTHK+TDLTGAGAFVLSAAACAWKSGSF SGA+RP LLN+AVG+WGVRLA YLF RI+KTG+ +RLA FFP K EGWLDS +S+FP +LAGFWTIQAMWAWVVSLPVTLANFSPAR VPMGVGGWAC GL A GL +E+VADYQKFQFK+DP NKGKF+ SGLWS+SRHPNYLGE+ VWW ILGVA+PALRGP ++A+G ASP FI+ LI+YVSG+PMLE+QHD+KYG DP+Y+EWK+NTPM++PD+SK Sbjct: 5 RVLGFGHALGGAAAAFRPFSTRT-GLKMAGGGSGLLFSAGVIGGANLIGFGVTATTKTHKVTDLTGAGAFVLSAAACAWKSGSFRSGAIRPLLLNVAVGVWGVRLASYLFARIIKTGE-DQRLARFFPGKDEGWLDSARSLFPVNLAGFWTIQAMWAWVVSLPVTLANFSPARAVPMGVGGWACLGLAATGLAVETVADYQKFQFKNDPDNKGKFMTSGLWSLSRHPNYLGEMGVWWAILGVALPALRGPGRVALGFASPAFITALIMYVSGVPMLEQQHDEKYGGDPRYREWKENTPMILPDMSK 308
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: A0A835Z1P4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P4_9STRA) HSP 1 Score: 323 bits (828), Expect = 3.280e-103 Identity = 164/273 (60.07%), Postives = 204/273 (74.73%), Query Frame = 2 Query: 371 SASGLLFSAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSAAACAWKSGSFASGALRPTLLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLANFSP-ARTVPMGVGGWACAGLFAAGLIMESVADYQKFQFKSDPKNKGKFVDSGLWSISRHPNYLGELTVWWGILGVAVPALRGPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVP 1186 S +GLLFSA +IGG NL+GFSITA TKTHK+TDL G GAFV SAAA A+ +G A RP +L+ AV +WG+RLAG+LF+RIL + K RL F P+KGE WLDS S FP +LAGFW IQA WAWVVSLPVT+ANF+P A T +G+GG FA G E++AD+QK FK +P NKGK++D G+WS+SRHPNY GEL +W + +VPALRGPRQ+ IG SPLFIS LILYVSGIP+LE++ +K +G D KY ++K+ TP+LVP Sbjct: 22 SPNGLLFSAAIIGGINLLGFSITAATKTHKLTDLFGTGAFVASAAASAYVNGVHAHPWSRPFILSAAVSIWGIRLAGHLFERILTSPK-DPRLEKFMPKKGEKWLDSSGSNFPLNLAGFWMIQAAWAWVVSLPVTMANFNPVASTQRLGMGGRVALLTFAGGFAFEAIADWQKRSFKKNPANKGKWIDQGVWSVSRHPNYFGELLIWSSLFFASVPALRGPRQVLIGAVSPLFISGLILYVSGIPLLEDKMNKDHGQDEKYLKYKETTPLLVP 293
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: A0A6S9K4Z3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K4Z3_HETAK) HSP 1 Score: 290 bits (741), Expect = 6.060e-90 Identity = 149/286 (52.10%), Postives = 191/286 (66.78%), Query Frame = 2 Query: 368 HSASGLLFSAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSAAACAWKS---GSFASGALRPTLLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLANFSPARTVP----------MGVGGWACAGLFAAGLIMESVADYQKFQFKSDPKNKGKFVDSGLWSISRHPNYLGELTVWWGILGVAVPALRGPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVP 1186 H+ GLLFS GVIGG NL GF++TA +THK+TDL GAG+FV SA CA ++ G + LR LL AV WG RLAGYLF+R+L G RL +F+PE+GEGW + KS +P L+GFW IQA W W+VS PVTLA F+ A +G GG F GL++E VAD QK+ FK +NKGK++++G+W SRHPNY GE VWWG+LG+A P LRGP QLA+GLASPLF +LL+ VSGIPMLE+++D +Y +YQ +K T +L+P Sbjct: 11 HAHGGLLFSGGVIGGLNLAGFAVTAALETHKLTDLVGAGSFVASAVLCARRAAGPGGVGALPLRAALLAGAVAAWGTRLAGYLFRRVLYVGG-DDRLDSFYPEEGEGWFNWEKSFYPVKLSGFWVIQAAWGWLVSAPVTLAIFNAASPNAGAAQAAAARRLGWGGALSLAAFVGGLLLEWVADQQKWVFKKKEENKGKWIETGVWRYSRHPNYFGETAVWWGLLGLAAPLLRGPGQLALGLASPLFTTLLLTQVSGIPMLEKKYDARYANSAEYQAYKARTNVLIP 295
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: A0A7S3YEU5_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YEU5_9EUKA) HSP 1 Score: 216 bits (550), Expect = 3.510e-62 Identity = 127/279 (45.52%), Postives = 174/279 (62.37%), Query Frame = 2 Query: 404 IGGANLVGFSITAGTKTHKITDLTGAGAFVLSAAAC----AWKSGSFASGALRPTLLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLANFSPA------RTVPMGVGGWACA-GL--FAAGLIMESVADYQKFQFKSDPKN--KGKFVDSGLWSISRHPNYLGELTVWWGILGVAVPALRGPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVPDLS 1195 +GG NL GF+ TA T THK+TD+TG AF +SA A A K G AS + RP +L++ V W RL GYLF RI K+ + RL F ++GE L +G S FP L FW+IQA+WAW LPVT+A + RT P + A G F+ G ++E++AD QK QFK+D N + K+ D GLWSISR+PNYLGE+TVWW + +A P A +ASP+F++ L+ VSGIP++E+++D KYG + +Y+++K TPMLVP L+ Sbjct: 5 VGGWNLAGFTATALTGTHKLTDITGTSAFAVSALASLGLLASKRGLKASLSPRPIMLSVCVTAWAARLGGYLFDRIRKSHE-DPRLKYMFRKEGEPML-TGPSAFPLKLLNFWSIQALWAWTSMLPVTMAIAAAGDPKKVMRTAPRSISSLALGIGFVGFSTGFLVETLADSQKSQFKNDVTNPRRDKWCDQGLWSISRYPNYLGEMTVWWSLFVMA-----NPLAPAWTVASPVFVTFLLTRVSGIPLIEKRYDSKYGNEEEYKQYKAKTPMLVPHLA 276
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: A0A0G4EDP8_VITBC (S5A_REDUCTASE domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EDP8_VITBC) HSP 1 Score: 216 bits (549), Expect = 4.370e-61 Identity = 130/290 (44.83%), Postives = 173/290 (59.66%), Query Frame = 2 Query: 380 GLLFSAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSAAACAWKSGSFASGALRPTLLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLANFSPARTVPMGVGGWACAG--LFAAGLIMESVADYQKFQFKSDP------KNKG----KFVDSGLWSISRHPNYLGELTVWWGILGVAVPALR---GPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVPDLSKFF 1204 GL+ SA V G N +GF+I+A T T KITDL G G FVL+A +G A RP L AV LWG RLA +LF RILKTG+ RL + F G LA FWT Q +W W+ LP T+A +S A T + W G LF+ G E++AD QK+ K K KG K++D GLW + R+PNY GE+ VW G+ VAVPAL GP+ +A+G SP F+S L+L+VSG+P+ E++ DK++G DP+YQE+KK+TP+++PDL+K F Sbjct: 88 GLVESAVVALGVNGLGFAISAITGTQKITDLFGTGCFVLTALNSFRSAGVPIDIASRPAFLTAAVSLWGTRLASFLFNRILKTGE-DTRLTDQFQSTG-------------GLAAFWTAQTVWCWLSLLPSTVAVYSKAAT---SLTRWDAFGIALFSLGFAFETIADNQKWAKKQREMKGEAAKGKGDKAAKWMDEGLWRLCRYPNYFGEICVWSGLYAVAVPALYQAYGPKMVALGALSPAFVSSLLLFVSGVPLAEKRADKRFGDDPQYQEYKKSTPLIIPDLTKVF 360
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: A0A6U4M307_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4M307_HEMAN) HSP 1 Score: 212 bits (540), Expect = 1.340e-60 Identity = 119/276 (43.12%), Postives = 166/276 (60.14%), Query Frame = 2 Query: 383 LLFSAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSA-AACAWKSGSFASGA------LRPTLLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLANFSPARTVPMGVGGWACAGLFAAGLIMESVADYQKFQFKS-DPKNKGKFVDSGLWSISRHPNYLGELTVWWGILGVAVPALRGPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVP 1186 L+ SA V+GG N+ GF TA T THK+ D+TG G+FV+S+ A CA F + LRP +L AVG WG RLA +L RI+++ + KR +FFP+ GE P LAGFW +QA W +V LPVTLA A P+G +A FA G + E++AD+QK FK+ NK ++ D GLW SRHPNY GE+ VWW + A A+ PR +ASPL + L+L+VSG+P++E+++D KY + +YQ +K +T ++VP Sbjct: 27 LVVSAAVVGGLNVAGFVATAATGTHKLIDITGTGSFVVSSLATCAVCLSHFRKVSPGKPLPLRPIVLTAAVGFWGTRLASFLLYRIIQSPQ-DKRFDDFFPKPGE---------LPVKLAGFWAVQATWGFVCLLPVTLACRRAAAVAPVGPAFYAAMSAFACGFLCEAIADHQKMNFKAASDANKERWCDVGLWQYSRHPNYFGEMVVWWSLWAAAGRAV--PRW---SVASPLMVCGLLLFVSGVPLIEKKYDAKYAKNAEYQRYKSSTNLIVP 287
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: I0YVW6_COCSC (DUF1295-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YVW6_COCSC) HSP 1 Score: 210 bits (535), Expect = 5.180e-60 Identity = 126/271 (46.49%), Postives = 170/271 (62.73%), Query Frame = 2 Query: 392 SAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSA-----AACAWKSGSFASGALRPTLLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLAN-FSPARTVPMGVGGWACAGLFAAGLIMESVADYQKFQFKSDPKNKGKFVDSGLWSISRHPNYLGELTVWWGILGVAVPALRGPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVP 1186 SA VI G N GF++TA T++HKITDLTG AF+ SA AAC + + + L AV LWG RLAGYLF R+L+TGK RL FP L +G+SM+P LAGFWT Q++W W+V LP+T++ +PA P+G GW A F AG +E+VAD QKF FKS + KF+DSGL+++ RHPNY GE+ +W + +A + I +ASP F L+LYVSGIP LE+ H+K+YG D Y+++K +T +L+P Sbjct: 13 SALVIVGFNTAGFAVTAVTRSHKITDLTGTTAFIASAWATHAAACHMHNLRLFQPS-KSLFLAGAVTLWGTRLAGYLFWRVLQTGK-DARLNFLFPRDESEPLLTGRSMYPIKLAGFWTAQSLWGWIVLLPITVSQTLTPAA--PLGPLGWIAAAGFLAGFAIETVADLQKFYFKS--AHPDKFMDSGLFALCRHPNYFGEILLWTSLTVLAGTHGVFAKHPWI-IASPAFTIFLLLYVSGIPTLEKSHEKRYGKDAAYKDYKASTNLLLP 276
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: A0A8J9S1B4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S1B4_9CHLO) HSP 1 Score: 209 bits (533), Expect = 1.690e-59 Identity = 127/277 (45.85%), Postives = 168/277 (60.65%), Query Frame = 2 Query: 392 SAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSAAACAWKSGSFASGA-----LRPT---LLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLANFSPARTVPMGVGGWACAGLFAAGLIMESVADYQKFQFKSDPKNKGKFVDSGLWSISRHPNYLGELTVWWGILGVAVPALRGPRQLAIG----LASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVP 1186 SA VI G N GF+ITA T++HKITDLTG AFV SA W + + A +P+ L AV LWG RLAGYLF R+L+TGK RL FP+ + L +G+SM+P LAGFWT Q++W W+V LPVT+ + A V +G GW A F G E++AD QKFQFK+ N KF+DSGL+++ RHPNY GE+ +W ++ L G + LASP F L++YVSGIP LE H+K+YG D Y+ +K +T +L+P Sbjct: 34 SALVIAGFNTAGFAITAVTRSHKITDLTGTTAFVASA----WATHAATCEAHNLRLFQPSKSLFLAGAVTLWGARLAGYLFYRVLQTGK-DARLNFLFPKDEKEPLLTGRSMYPIKLAGFWTAQSLWGWIVLLPVTVGQ-TLAPAVALGPVGWLAAAGFITGFAFETIADLQKFQFKT--ANPDKFMDSGLFALCRHPNYFGEILLW-----SSLTVLAGTHGVLAKHPWILASPAFTIFLLVYVSGIPPLEISHEKRYGKDAAYKRYKASTNLLLP 297
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: A0A7S2X9E1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X9E1_9EUKA) HSP 1 Score: 205 bits (522), Expect = 6.220e-58 Identity = 123/287 (42.86%), Postives = 173/287 (60.28%), Query Frame = 2 Query: 383 LLFSAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSAAAC----AWKSGSFASGALRPTLLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVTLANFSPA------RTVPMGVG----GWACAGLFAAGLIMESVADYQKFQFKSDPKN--KGKFVDSGLWSISRHPNYLGELTVWWGILGVAVPALRGPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVPDLS 1195 L+ S +GG NL GF+ TA T +HK+TD+TG AF +SA A A K G A+ + RP +L++ V W RL GYLF RI + + RL F + GE L +G S FP L FW+IQA+WAW LPVT+A + R P + G G F+ G ++E++AD QK QFKSD N + K+ D GLWSIS++PNYLGE+TVWW + +A P P ASP+F++ L+ VSGIP++E+++D+KYG D +++++K TPML+P + Sbjct: 12 LVVSGLAVGGWNLAGFTATALTGSHKLTDITGTSAFTVSALASLGLLASKRGVKAAISPRPLMLSVCVTAWAARLGGYLFDRIRNSHE-DPRLKYMFRKDGEPML-TGPSRFPLKLLNFWSIQALWAWTSMLPVTMAIAAAGDPKKVIRAAPKSISSVTLGLGLIG-FSTGFLVETLADRQKSQFKSDVANPRRDKWCDQGLWSISQYPNYLGEMTVWWSLFLMAQPV--APVWTV---ASPVFVTFLLTRVSGIPLMEKRYDRKYGNDEEFKQYKATTPMLLPSFA 290
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Match: A0A2P6TMN0_CHLSO (S5A_REDUCTASE domain-containing protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TMN0_CHLSO) HSP 1 Score: 204 bits (520), Expect = 9.610e-58 Identity = 131/280 (46.79%), Postives = 174/280 (62.14%), Query Frame = 2 Query: 383 LLFSAGVIGGANLVGFSITAGTKTHKITDLTGAGAFVLSAAAC-AWKSGSFASGALRPT---LLNMAVGLWGVRLAGYLFQRILKTGKFRKRLANFFPEKGEGWLDSGKSMFPASLAGFWTIQAMWAWVVSLPVT----LANFSPA-RTVPMGVGGWACAGLFAAGLIMESVADYQKFQFKSDPKNKGKFVDS-GLWSISRHPNYLGELTVWWGILGVAVPAL--RGPRQLAIGLASPLFISLLILYVSGIPMLEEQHDKKYGVDPKYQEWKKNTPMLVP 1186 L SA VI AN +GF++T T++HKITDLTG +F LSA A A S + + L P+ LL V LW +RL GYLF R+L+ GK RL FF + GE L +G S +P LA FWT+Q +WAW+ LPVT LA PA R + G A LF GL+ME+VAD+QKF++KSDP N G+F+ GL++ SRHPNY GE+ VW G+ +A PA+ R P LA SPLF L+ ++SGIP LE ++YG P ++++K +T +LVP Sbjct: 9 LKHSAKVIAAANALGFAVTTVTQSHKITDLTGTASFALSAIATHAATSRALGTPVLSPSRGALLAGCVSLWTLRLGGYLFYRVLQVGK-DARLDQFFQQPGEPLL-TGPSNYPLRLAFFWTMQGLWAWIGLLPVTAAHALARSDPATRRLAWGPALVAGLLLFGGGLVMETVADWQKFKWKSDPANAGRFMGPVGLFAYSRHPNYFGEMCVWAGLWVMAGPAVWARFPWTLA----SPLFTFYLLRFLSGIPPLERGWAERYGGQPAFEQYKASTNLLVP 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig118.1146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig118.1146.1 >prot_H-paniculata_contig118.1146.1 ID=prot_H-paniculata_contig118.1146.1|Name=mRNA_H-paniculata_contig118.1146.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=305bp MLRIVGFAQHAIRPLATKAAGLRMGHSASGLLFSAGVIGGANLVGFSITAback to top mRNA from alignment at H-paniculata_contig118:4125..11686- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig118.1146.1 ID=mRNA_H-paniculata_contig118.1146.1|Name=mRNA_H-paniculata_contig118.1146.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7562bp|location=Sequence derived from alignment at H-paniculata_contig118:4125..11686- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig118:4125..11686- >mRNA_H-paniculata_contig118.1146.1 ID=mRNA_H-paniculata_contig118.1146.1|Name=mRNA_H-paniculata_contig118.1146.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1830bp|location=Sequence derived from alignment at H-paniculata_contig118:4125..11686- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |