mRNA_H-paniculata_contig11798.1144.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig11798.1144.1
Unique Name	mRNA_H-paniculata_contig11798.1144.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 534 bits (1376), Expect = 5.040e-180
Identity = 294/445 (66.07%), Postives = 329/445 (73.93%), Query Frame = 2

Query:  290 MGDNPPVDNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSG--TCFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPA-TAKESSSKKSAIDFSADGDESDEGFMYATTHNGKEVKVNTAGAT------------------------------------------LLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAIT 1489
            MGD  P DNT+NLAN IRGLK F G            LCVVLG TRRDILPLLK   RPA+TD   YAAYCKSNEDLYAILY LVELPA+LSVQKHEDD++ISGDGQAAF+ELNLNYNKVTDEVIRATMEEL+NTPMEP QNPDDYFNQKHLLRHK +KMGETISD YF D CVTGFT+EYKDVKMIMYRDPDFNVD+MQTTMRHMFLDEQSR G KG IAGRGFAM  TTS   TCF+CGE GHI RNC  KRGKG+ ++TKPAGAAKWCSVHFTT+HSDEEC+EQGA RP+KS++TGKA SAC       S S K   A T +E+SS ++ IDFSA+G ES+EGFMYA  H G+++K    GAT                                          LL+DTGA+E MLDD LIPGLKEIM+E+K+L KPK ++
Sbjct:    1 MGDYSPGDNTSNLANAIRGLKTFYG------------LCVVLGGTRRDILPLLKGRSRPAETDDD-YAAYCKSNEDLYAILYRLVELPASLSVQKHEDDSKISGDGQAAFQELNLNYNKVTDEVIRATMEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATTSEEPTCFDCGEKGHIWRNCSEKRGKGK-KKTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKKSSNTGKALSACASCTHCFSTSNKTELAMTKQEASSTQAEIDFSAEG-ESEEGFMYAIVHKGEDLKPMATGATPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIDTGASENMLDDCLIPGLKEIMREHKELAKPKVVS 430

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 466 bits (1198), Expect = 9.400e-155
Identity = 242/395 (61.27%), Postives = 301/395 (76.20%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTH--NGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAI 1486
            D++TNLA  I+GLKKFDG++PAEFK WMKK CVVLGVTR+DILPLLK++R+P   DTAA+ +Y ++NEDLYAIL+L VELPAALS+QKHEDD  ISGDGQAAF EL  NY++VTDEVIRA MEEL N PM PG+NPDDYFNQKHLLR ++ KMGE ISDR FKDICV GF+DEYKDVK++++RDP FNV  M +TMR++FLDEQSRKG KG IAGRGFAMATT S   C  C E GHIRRNCP+ + + + ++TKPAGA KWCS H TT HSDEECY+QG KRPE + D+ K F+AC++    SSAS K       +S+++ + +DF+ D D  D GFM+AT    +G+    ++ G  L+VD+ A+ETM D+RLIP     + +Y Q   PK +
Sbjct:   35 DSSTNLATVIKGLKKFDGKDPAEFKTWMKKFCVVLGVTRKDILPLLKEQRKPDPADTAAFGSYARANEDLYAILFLQVELPAALSIQKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAK-KKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSNKVFTACSNCTHCSSASKKD------DSNNEVAVVDFTRDEDAFDSGFMFATCSRISGRNFAASSTGVRLVVDSEASETMFDNRLIPDGN--LHDYTQRNSPKIV 420

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 4.440e-148
Identity = 240/386 (62.18%), Postives = 290/386 (75.13%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPAT---AKESSSKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1435
            D +TNLAN IRGL KFDG  P +F  WMKKL VV+GVTRRDI+PLLK  RRP  +DT  +AAY ++NEDLYAIL+ LVELPAAL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   + K   T    +   ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM DDRLIP 
Sbjct:   16 DGSTNLANVIRGLPKFDGTKPEDFNDWMKKLGVVVGVTRRDIMPLLKGMRRPDPSDTT-FAAYERANEDLYAILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIPN 397

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 2.160e-145
Identity = 221/342 (64.62%), Postives = 269/342 (78.65%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYAT 1333
            D++TNLA  I+GLKKFDG++PAEFK WMKK CVVLGVTR+DILPLLK +R+P   DTAA+ +Y ++NEDLYA L+LL+E PAALS+QKHEDD  ISGDGQAAF EL  NY++VTDEVIRA MEEL N PM PG+NPD+YFNQKHLLR ++ KMGE ISDR FKDICV GF+DEYKDVK++++RDP FNV  MQ+TMR++FLDEQSRKG KG IAGRGFAMATT S   C  C E GHIRRNCP+ + + + ++TKPAGA KWCS H TT HSDEECY+QG KRPE + D+ KAF+AC++  XX     K       +S+ + + +DF+ D D  D GFM+AT
Sbjct:   17 DSSTNLATVIKGLKKFDGKDPAEFKTWMKKFCVVLGVTRKDILPLLKKQRKPDHADTAAFDSYTRANEDLYASLFLLMEPPAALSIQKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAK-KKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSNCTXXXXXXNKH------DSNDEVAVVDFTRDEDAFDSGFMFAT 351

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5JC59_9PHAE (gag_pre-integrs domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC59_9PHAE)

HSP 1 Score: 444 bits (1142), Expect = 5.750e-144
Identity = 244/386 (63.21%), Postives = 294/386 (76.17%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGTC-FECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPATA--KE-SSSKKSAIDFSADGDESDEGFMYATTHN---GKEVKVNTAGATLLVDTGATETMLDDRLIPG 1435
            D +TNLAN IRGL KFDG  P +F  WMKKL VV+GVTRRDI+PLLK  RRP  +DT  +AAY ++NEDLYAIL+ LVELPAAL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG   FEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTHXXXXS+ S   + K   T   KE   ++K+ IDFS D D    GFMY  T +   G+       G + LVD+GA+ETM D+RLIP 
Sbjct:   16 DGSTNLANVIRGLPKFDGTKPEDFNDWMKKLGVVVGVTRRDIMPLLKGMRRPDPSDTT-FAAYERANEDLYAILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPIYFECNEQGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXSTQSRDTHSKPTTTETPKEIEKTEKAEIDFSYDEDAFKGGFMYHATCSKAGGRTFTTTATGTSALVDSGASETMFDNRLIPN 397

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 436 bits (1120), Expect = 6.480e-144
Identity = 236/386 (61.14%), Postives = 287/386 (74.35%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSK------KSAIDFSADGDESDEGFMY---ATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1435
            D +T LAN IRGL KFD   P +F  WMKKL +V+G TRRDI+PLLK  RRP  +DT  +AAY ++NEDLYAIL+ LVELPAAL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTHXXXX + S        K  + K      K+ +DFS D D    GFMY    +  +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:   16 DGSTILANVIRGLPKFDETKPEDFNDWMKKLGIVVGDTRRDIMPLLKGMRRPDPSDTT-FAAYERANEDLYAILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXXTQSRDTHAKPTKRETPKETEKTEKAEVDFSYDEDTFKGGFMYHAICSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 1.040e-143
Identity = 242/386 (62.69%), Postives = 290/386 (75.13%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESSSKKSA-IDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1435
            D +TNLAN IRGL KFDG  P +F  WMKKL VV+GVTRRDI+PLLK  RRP  +DT  +AAY ++NEDLYAIL+ LVELPAAL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+   + A IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM DDRLIP 
Sbjct:   16 DGSTNLANVIRGLPKFDGTKPEDFNDWMKKLGVVVGVTRRDIMPLLKGMRRPDPSDTN-FAAYERANEDLYAILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIPN 397

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 447 bits (1150), Expect = 3.300e-143
Identity = 241/386 (62.44%), Postives = 290/386 (75.13%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESSSKKSA-IDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1435
            D +TNLAN IRGL KFDG  P +F  WMKKL VV+GVTRRDI+PLLK  RRP  +DT  +AAY ++NEDLYAIL+ LVELPAAL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+   + A IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:   16 DGSTNLANVIRGLPKFDGTKPEDFNDWMKKLGVVVGVTRRDIMPLLKGMRRPDPSDTT-FAAYERANEDLYAILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 5.270e-142
Identity = 238/386 (61.66%), Postives = 290/386 (75.13%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPATA--KESS-SKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1435
            D +TNLAN IRGL KFDG  P +F  WMKKL VV+GVTRRDI+PLLK  RRP  +DT  +AAY ++NEDLYAIL+ LVELPAAL+V KHEDD  + GDGQAAF EL  NYN++TDE IRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   + K   T   KE+  ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:   35 DGSTNLANVIRGLPKFDGTKPEDFNDWMKKLGVVVGVTRRDIMPLLKGMRRPDPSDTT-FAAYERANEDLYAILFCLVELPAALTVHKHEDDTGLCGDGQAAFAELKANYNRLTDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIHAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 416

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BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 3.420e-140
Identity = 241/386 (62.44%), Postives = 292/386 (75.65%), Query Frame = 2

Query:  311 DNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDILPLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESS-SKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1435
            D +TNLAN IRGL KFDG  P +F  WMKKL VV+GVTRRDI+PLLK  RRP  +DT  +AAY ++NEDLYAIL+ LVELPAAL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+  ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:   16 DGSTNLANVIRGLPKFDGTKPEDFNDWMKKLGVVVGVTRRDIMPLLKGMRRPDPSDTT-FAAYERANEDLYAILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig11798.1144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KW66_9PHAE	5.040e-180	66.07	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5L580_9PHAE	9.400e-155	61.27	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5KJB9_9PHAE	4.440e-148	62.18	Uncharacterized protein (Fragment) n=2 Tax=Ectocar...	[more]
A0A6H5JF66_9PHAE	2.160e-145	64.62	CCHC-type domain-containing protein n=2 Tax=Ectoca...	[more]
A0A6H5JC59_9PHAE	5.750e-144	63.21	gag_pre-integrs domain-containing protein (Fragmen...	[more]
A0A6H5KN28_9PHAE	6.480e-144	61.14	Uncharacterized protein (Fragment) n=3 Tax=Ectocar...	[more]
A0A6H5K3T5_9PHAE	1.040e-143	62.69	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L1Z9_9PHAE	3.300e-143	62.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUN9_9PHAE	5.270e-142	61.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KHG5_9PHAE	3.420e-140	62.44	Uncharacterized protein n=11 Tax=Ectocarpus sp. CC...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig11798	contig	H-paniculata_contig11798:2250..3738 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	1
Model size	1491
Cds size	1200
Stop	0
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928888.878159-UTR-H-paniculata_contig11798:2249..2538	1622928888.878159-UTR-H-paniculata_contig11798:2249..2538	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11798 2250..2538 +
1691480657.723637-UTR-H-paniculata_contig11798:2249..2538	1691480657.723637-UTR-H-paniculata_contig11798:2249..2538	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11798 2250..2538 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928889.2677922-CDS-H-paniculata_contig11798:2538..3738	1622928889.2677922-CDS-H-paniculata_contig11798:2538..3738	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig11798 2539..3738 +
1691480657.737715-CDS-H-paniculata_contig11798:2538..3738	1691480657.737715-CDS-H-paniculata_contig11798:2538..3738	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig11798 2539..3738 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig11798.1144.1	prot_H-paniculata_contig11798.1144.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig11798 2539..3738 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig11798:2250..3738+
coding sequence from alignment at H-paniculata_contig11798:2250..3738+

protein sequence of mRNA_H-paniculata_contig11798.1144.1

>prot_H-paniculata_contig11798.1144.1 ID=prot_H-paniculata_contig11798.1144.1|Name=mRNA_H-paniculata_contig11798.1144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=400bp
MGDNPPVDNTTNLANTIRGLKKFDGRNPAEFKGWMKKLCVVLGVTRRDIL
PLLKDERRPAQTDTAAYAAYCKSNEDLYAILYLLVELPAALSVQKHEDDN
EISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQK
HLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQ
TTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGTCFECGENGHIRRNCPR
KRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAF
SACTHCTHCSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTH
NGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAIT

mRNA from alignment at H-paniculata_contig11798:2250..3738+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig11798.1144.1 ID=mRNA_H-paniculata_contig11798.1144.1|Name=mRNA_H-paniculata_contig11798.1144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1489bp|location=Sequence derived from alignment at H-paniculata_contig11798:2250..3738+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTATACAGCGATCCGAGAGGGGAGGGTAGCAGGAACGGGGTCGGGACGGT
ACACCGTACCGTAGTCCTATATACCCATCCGCGAGGAGAGGGTAACAGGA
GCGGGGCCGGGAAAAGACGACCTCAACCGTAGTCCTTTACACAGGAACGG
GGTCGGGAAGCCTCGGGCTCACACCACGAGCAAACAACTCCTACGACAGG
AGGGATCGCTGCGACAGCAGGAAACACCAGCATCAGCCTGTACACCACAA
GGCAACAGGAGCGCATCGCGATAGGAAAGGCACATCAAGATGGGTGATAA
TCCCCCCGTCGACAACACCACTAACCTCGCCAACACCATTCGAGGACTGA
AGAAGTTCGATGGAAGGAACCCAGCCGAATTCAAAGGTTGGATGAAGAAA
CTCTGCGTCGTCCTGGGAGTTACACGCAGGGACATTCTCCCGCTGCTTAA
AGACGAACGCAGGCCTGCCCAAACGGATACTGCTGCCTACGCCGCCTACT
GCAAGTCGAACGAGGACTTGTACGCCATACTCTACTTGCTAGTGGAACTA
CCGGCGGCCCTTTCGGTGCAGAAGCACGAGGATGACAACGAGATCAGCGG
AGACGGACAGGCGGCCTTCAGGGAACTGAACCTGAACTACAACAAGGTTA
CGGACGAAGTGATTCGAGCCACCATGGAGGAGCTGGTCAACACGCCCATG
GAGCCAGGACAGAACCCGGACGACTACTTCAATCAGAAGCACCTCCTTCG
ACACAAGGTCCAGAAGATGGGGGAGACCATCTCGGACCGCTACTTCAAGG
ATATATGCGTCACAGGATTCACCGACGAGTACAAGGACGTGAAGATGATC
ATGTACCGCGACCCAGACTTTAACGTCGACCAGATGCAGACCACCATGCG
GCACATGTTTCTGGACGAACAATCTCGCAAAGGATCCAAAGGTGGCATTG
CCGGCCGCGGCTTCGCCATGGCCACAACCACATCGGGGACCTGTTTCGAA
TGCGGCGAGAATGGACACATCCGCAGGAACTGCCCCCGAAAGAGAGGCAA
GGGAAGAATGCAGAGGACCAAGCCGGCGGGAGCCGCCAAGTGGTGCTCCG
TTCACTTCACGACCAAACACTCCGACGAAGAATGCTACGAGCAAGGAGCG
AAGCGGCCGGAAAAATCGAACGACACGGGCAAGGCTTTCTCGGCATGTAC
GCACTGCACGCACTGCTCTTCAGCTAGCTACAAGAAGGGGCCAGCCACTG
CGAAGGAGTCGAGCAGCAAGAAATCCGCAATCGACTTTAGTGCGGACGGC
GACGAGTCCGATGAAGGATTCATGTACGCCACCACTCATAACGGCAAGGA
AGTCAAAGTCAACACTGCAGGAGCCACCCTACTTGTAGACACCGGCGCAA
CAGAGACCATGCTCGACGACCGCCTCATCCCAGGCCTGAAGGAGATCATG
CAAGAGTACAAGCAACTCGTGAAGCCGAAGGCCATCACG

Coding sequence (CDS) from alignment at H-paniculata_contig11798:2250..3738+

>mRNA_H-paniculata_contig11798.1144.1 ID=mRNA_H-paniculata_contig11798.1144.1|Name=mRNA_H-paniculata_contig11798.1144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2400bp|location=Sequence derived from alignment at H-paniculata_contig11798:2250..3738+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTGATAATCCCCCCGTCGACAACACCACTAACCTCGCCAACACCAT
TCGAGGACTGAAGAAGTTCGATGGAAGGAACCCAGCCGAATTCAAAGGTT
GGATGAAGAAACTCTGCGTCGTCCTGGGAGTTACACGCAGGGACATTCTC
CCGCTGCTTAAAGACGAACGCAGGCCTGCCCAAACGGATACTGCTGCCTA
CGCCGCCTACTGCAAGTCGAACGAGGACTTGTACGCCATACTCTACTTGC
TAGTGGAACTACCGGCGGCCCTTTCGGTGCAGAAGCACGAGGATGACAAC
GAGATCAGCGGAGACGGACAGGCGGCCTTCAGGGAACTGAACCTGAACTA
CAACAAGGTTACGGACGAAGTGATTCGAGCCACCATGGAGGAGCTGGTCA
ACACGCCCATGGAGCCAGGACAGAACCCGGACGACTACTTCAATCAGAAG
CACCTCCTTCGACACAAGGTCCAGAAGATGGGGGAGACCATCTCGGACCG
CTACTTCAAGGATATATGCGTCACAGGATTCACCGACGAGTACAAGGACG
TGAAGATGATCATGTACCGCGACCCAGACTTTAACGTCGACCAGATGCAG
ACCACCATGCGGCACATGTTTCTGGACGAACAATCTCGCAAAGGATCCAA
AGGTGGCATTGCCGGCCGCGGCTTCGCCATGGCCACAACCACATCGGGGA
CCTGTTTCGAATGCGGCGAGAATGGACACATCCGCAGGAACTGCCCCCGA
AAGAGAGGCAAGGGAAGAATGCAGAGGACCAAGCCGGCGGGAGCCGCCAA
GTGGTGCTCCGTTCACTTCACGACCAAACACTCCGACGAAGAATGCTACG
AGCAAGGAGCGAAGCGGCCGGAAAAATCGAACGACACGGGCAAGGCTTTC
TCGGCATGTACGCACTGCACGCACTGCTCTTCAGCTAGCTACAAGAAGGG
GCCAGCCACTGCGAAGGAGTCGAGCAGCAAGAAATCCGCAATCGACTTTA
GTGCGGACGGCGACGAGTCCGATGAAGGATTCATGTACGCCACCACTCAT
AACGGCAAGGAAGTCAAAGTCAACACTGCAGGAGCCACCCTACTTGTAGA
CACCGGCGCAACAGAGACCATGCTCGACGACCGCCTCATCCCAGGCCTGA
AGGAGATCATGCAAGAGTACAAGCAACTCGTGAAGCCGAAGGCCATCACG
ATGGGTGATAATCCCCCCGTCGACAACACCACTAACCTCGCCAACACCAT
TCGAGGACTGAAGAAGTTCGATGGAAGGAACCCAGCCGAATTCAAAGGTT
GGATGAAGAAACTCTGCGTCGTCCTGGGAGTTACACGCAGGGACATTCTC
CCGCTGCTTAAAGACGAACGCAGGCCTGCCCAAACGGATACTGCTGCCTA
CGCCGCCTACTGCAAGTCGAACGAGGACTTGTACGCCATACTCTACTTGC
TAGTGGAACTACCGGCGGCCCTTTCGGTGCAGAAGCACGAGGATGACAAC
GAGATCAGCGGAGACGGACAGGCGGCCTTCAGGGAACTGAACCTGAACTA
CAACAAGGTTACGGACGAAGTGATTCGAGCCACCATGGAGGAGCTGGTCA
ACACGCCCATGGAGCCAGGACAGAACCCGGACGACTACTTCAATCAGAAG
CACCTCCTTCGACACAAGGTCCAGAAGATGGGGGAGACCATCTCGGACCG
CTACTTCAAGGATATATGCGTCACAGGATTCACCGACGAGTACAAGGACG
TGAAGATGATCATGTACCGCGACCCAGACTTTAACGTCGACCAGATGCAG
ACCACCATGCGGCACATGTTTCTGGACGAACAATCTCGCAAAGGATCCAA
AGGTGGCATTGCCGGCCGCGGCTTCGCCATGGCCACAACCACATCGGGGA
CCTGTTTCGAATGCGGCGAGAATGGACACATCCGCAGGAACTGCCCCCGA
AAGAGAGGCAAGGGAAGAATGCAGAGGACCAAGCCGGCGGGAGCCGCCAA
GTGGTGCTCCGTTCACTTCACGACCAAACACTCCGACGAAGAATGCTACG
AGCAAGGAGCGAAGCGGCCGGAAAAATCGAACGACACGGGCAAGGCTTTC
TCGGCATGTACGCACTGCACGCACTGCTCTTCAGCTAGCTACAAGAAGGG
GCCAGCCACTGCGAAGGAGTCGAGCAGCAAGAAATCCGCAATCGACTTTA
GTGCGGACGGCGACGAGTCCGATGAAGGATTCATGTACGCCACCACTCAT
AACGGCAAGGAAGTCAAAGTCAACACTGCAGGAGCCACCCTACTTGTAGA
CACCGGCGCAACAGAGACCATGCTCGACGACCGCCTCATCCCAGGCCTGA
AGGAGATCATGCAAGAGTACAAGCAACTCGTGAAGCCGAAGGCCATCACG