mRNA_H-paniculata_contig451.11347.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: A0A6H5KZ19_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ19_9PHAE) HSP 1 Score: 515 bits (1326), Expect = 1.580e-168 Identity = 272/569 (47.80%), Postives = 365/569 (64.15%), Query Frame = 1
Query: 100 EAPATTAGNNH-DAWSCPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACP---ICREMFSPETVEKNVTVFEDMRKATVVCKNKGCGAQFCPLRWKHHQEECPAASVQCKHHLVGCAWKGRRRGLSAHLESCAYEKIKGLIPRISGSLKKVQGQIHALEARVLAQNTRLANMRAFLVGVHQRERRGSLFPATYALLWRPQDWRRYSCPN-SDGVLANVTLICFAPIVFMALWGAGVFHSGSGGSLAQRVASLVGLAILGFFALVEYNNSAPWHVLTHPRLLRGVKIGPLLLESTTMLVVYAAIKPLSPSLQWAASLLFIAPLTFSTVVHGIHRFQVNLNEAQIQARQSL--PSRTRVRPSPVKVYRPTINGVIWAYAMLTFGAEAVLVARVSAKVGLCAASSGVGPRVWDELSDRLWANANIGRSPEEKDHIQQMNEINQWSTKAPFPNWTSIRARACMLVVCFFIFGVLVSAYRDCLRTVGFSLIAMHIMNKTYLLWDIWVGRWVMASLEQTSPRLNADAGGTRNALYDLWRSRLLVIWLVFGSASFVLLAMLSS 1785
EAPA +G+ H DAWSCP+C WFDMPV PPC+H+FC+ CLK VR+A +R+ + T P +CRE F+PE V+ + +FE+M KATV C+N C AQFCPLRWK HQEECP+A VQC HHLVGC W+G RR LS H+E CAYEKIKGLIPR+S SLK++ Q+H LEARV+AQN +AN RA L HQR+ GS+FPA YALLWRP +WR Y P GVL+NVTLIC API+F+AL GAGVF G G + +R LVG+AILGF AL+E++N +P+H L P LL+G+ IG LLE T +VY A+K L + A L +APL + TVV +HRF+V + A QA+++ P V P VK + +NGV+ ML LV V AK+G+ S+ +GP D + +W + G + ++K +++ ++ + P PN T R + VC +F ++V+ +RD L+ VG+S + + +++ + W++ VGR VM SL+QT R N D R DL RSRLL++W+V GS SF LL ML+S
Sbjct: 15 EAPAEESGDAHGDAWSCPVCFMWFDMPVFPPCQHTFCAGCLKSVVRAAAHRQRRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQCMHHLVGCVWEGARRDLSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLA--HQRQA-GSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLALCGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGLAIGEFLLEGTARSMVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPPVEPVAVKTHGTVVNGVVRGTTMLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSSGIALDDKARLKKRHDSIFRDLRTPLPNMTDRTTRRLIAAVCVCLFAIIVAFFRDILQMVGYSRLLLSVLDSAHFRWELHVGRVVMGSLQQT--RTNQDPNFARTRARDLLRSRLLLLWVVVGS-SFFLLFMLTS 577
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: A0A6F9DKF0_9ASCI (Multiple PDZ domain protein n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DKF0_9ASCI) HSP 1 Score: 65.9 bits (159), Expect = 4.050e-7 Identity = 42/146 (28.77%), Postives = 66/146 (45.21%), Query Frame = 1
Query: 133 DAWSCPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMF---SPETVEKNVTVFEDMRKATVVCKNKGCGAQFCPLRWK------HHQEECPAASVQCKHHLVGCAWKGRRRGLSAHLESCAYEKIKG 543
D C ICL F P C H+FCS CLK +VR + CPI R+ S + + ++ + + + K TV C N C L+ H +E CP ++C + GC++KG R H++ C +++ +G
Sbjct: 304 DDLQCDICLQPFVDPYDTKCGHTFCSICLKNYVR-----------LKKMCPIDRKELTVGSGDCWQSSLVLRKLVNKLTVRCPNH----DHCDLKLPRTDLEAHLKERCPGGMIRCSKAIYGCSYKGPRVEQVDHIKHCKFQQFEG 434
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: A0A0H3U1H9_9CHON (Tripartite motif-containing protein 35-like protein isoform 4 n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=A0A0H3U1H9_9CHON) HSP 1 Score: 62.4 bits (150), Expect = 6.150e-7 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 130 HDAWSCPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMFSPETVEKNVTV 336
D SCPIC F PVAPPC+H+FC ACL + + GN CP+CREM+S + ++ N T+
Sbjct: 11 EDELSCPICQDIFKDPVAPPCQHNFCWACLTSYWKKKGNSE---------CPVCREMYSIKDLKWNRTL 70
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: UPI00193A683F (ligand of Numb protein X 2-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A683F) HSP 1 Score: 65.1 bits (157), Expect = 6.910e-7 Identity = 45/146 (30.82%), Postives = 69/146 (47.26%), Query Frame = 1
Query: 145 CPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMFSPETVE---KNVTVFEDMRKATVVCKNKG-CGA--QFCPLRWKHHQEECPAASVQCKHHLVGCAWKGRRRGLSAHLESCAY----EKIKGLIP 552
C ICL P C H+FCS C+K ++R + CP+ RE + + ++ + + + K TV C ++ C Q C L+ H +E CP A +C + GC KG R G+ AHL+ CA+ +K+ L P
Sbjct: 296 CDICLQPLVDPYDTKCGHTFCSICIKNYLR-----------VKHICPVDREELTNTATDCWQSSLILRKLVNKLTVTCPHEEYCDKKIQRCDLKG-HLKEICPGAVSRCPKSMYGCDHKGPRAGIEAHLKICAFKDNNDKLSDLHP 429
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: A0A0H3U1G8_9CHON (Tripartite motif-containing protein 35-like protein isoform 3 n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=A0A0H3U1G8_9CHON) HSP 1 Score: 62.4 bits (150), Expect = 2.040e-6 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 130 HDAWSCPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMFSPETVEKNVTV 336
D SCPIC F PVAPPC+H+FC ACL + + GN CP+CREM+S + ++ N T+
Sbjct: 11 EDELSCPICQDIFKDPVAPPCQHNFCWACLTSYWKKKGNSE---------CPVCREMYSIKDLKWNRTL 70
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: A0A0H3U1C9_9CHON (Tripartite motif-containing protein 35-like protein isoform 2 n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=A0A0H3U1C9_9CHON) HSP 1 Score: 62.4 bits (150), Expect = 2.180e-6 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 130 HDAWSCPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMFSPETVEKNVTV 336
D SCPIC F PVAPPC+H+FC ACL + + GN CP+CREM+S + ++ N T+
Sbjct: 11 EDELSCPICQDIFKDPVAPPCQHNFCWACLTSYWKKKGNSE---------CPVCREMYSIKDLKWNRTL 70
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: A0A0H3U1L9_9CHON (Tripartite motif-containing protein 35-like protein isoform 1 n=2 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=A0A0H3U1L9_9CHON) HSP 1 Score: 62.4 bits (150), Expect = 3.440e-6 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 130 HDAWSCPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMFSPETVEKNVTV 336
D SCPIC F PVAPPC+H+FC ACL + + GN CP+CREM+S + ++ N T+
Sbjct: 11 EDELSCPICQDIFKDPVAPPCQHNFCWACLTSYWKKKGNSE---------CPVCREMYSIKDLKWNRTL 70
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: A0A7M5XGX3_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XGX3_9CNID) HSP 1 Score: 59.7 bits (143), Expect = 1.960e-5 Identity = 37/134 (27.61%), Postives = 59/134 (44.03%), Query Frame = 1
Query: 145 CPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMFSPETVEKNVTVFEDM-RKATVVC--KNKGCGAQFCPLRWKHHQEECPAASVQCKHHLVGCAWKGRRRGLSAHLESCAYEKI 537
C IC C + PV PCRH FCS C+K ++ + + +CP CR ++ V + +++ K + C KN+GC + H C V C + GC + R+ +H+E CA +
Sbjct: 19 CCICTCILEDPVESPCRHVFCSQCIKTWLSN-----------QKSCPHCRAPVHKRDLQSVVPLLKNIISKQKIYCDNKNRGCTDIIALENLQGHIASCQYGLVPCTYE--GCHVRVMRKDHKSHIEVCAKRTV 139
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Match: A0A1S3IG93_LINUN (ligand of Numb protein X 2 isoform X1 n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IG93_LINUN) HSP 1 Score: 58.5 bits (140), Expect = 5.990e-5 Identity = 41/147 (27.89%), Postives = 64/147 (43.54%), Query Frame = 1
Query: 145 CPICLCWFDMPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMFSPETVEK-NVTVFEDMRKATVVCKNKGCGAQFCPLRW--KHHQEECPAASVQCKHHLVGCAWKGRRRGLSAHLESCAY--EKIKGLIPRISGSL 570
C ICL P+ C H+FCS C+K +++ + CP+ R + + V+ ++ V + K VVC N + P H Q +C A +C GC ++G R L H+ CAY E ++P I G +
Sbjct: 61 CHICLQPLVNPMDTRCGHTFCSECIKHYLK-----------IQKICPLDRLTLTSKDVQPASIMVKRLLDKLLVVCPNVDYCEEVLPRSELEAHLQNKCRGAVTRCLKSRAGCPFQGPRSALQCHMWECAYREEDENLMVPVIEGEV 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig451.11347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig451.11347.1 >prot_H-paniculata_contig451.11347.1 ID=prot_H-paniculata_contig451.11347.1|Name=mRNA_H-paniculata_contig451.11347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=544bp MPVAPPCRHSFCSACLKKFVRSAGNRRPTNVPTRPACPICREMFSPETVEback to top mRNA from alignment at H-paniculata_contig451:1036..15241+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig451.11347.1 ID=mRNA_H-paniculata_contig451.11347.1|Name=mRNA_H-paniculata_contig451.11347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14206bp|location=Sequence derived from alignment at H-paniculata_contig451:1036..15241+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig451:1036..15241+ >mRNA_H-paniculata_contig451.11347.1 ID=mRNA_H-paniculata_contig451.11347.1|Name=mRNA_H-paniculata_contig451.11347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3264bp|location=Sequence derived from alignment at H-paniculata_contig451:1036..15241+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |