prot_H-paniculata_contig45.11324.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig45.11324.1
Unique Name	prot_H-paniculata_contig45.11324.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	558

Homology

[Close]

BLAST of mRNA_H-paniculata_contig45.11324.1 vs. uniprot
Match: D8LQ68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ68_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 2.040e-15
Identity = 65/135 (48.15%), Postives = 77/135 (57.04%), Query Frame = 0

Query:  422 ATIKTLQSELSLLKELVLSSEQKREEELSELRIRLEAQERRNRLPASDGDPQQMLSENGQRK----MGAGALNPSCRAQDDNADSGGV--SPRSTGVHNPFAAQEGGVATTPRDHFPAFEDALHDGASDDCAPSG 550
            ATI+ L++ELS L+E VL SEQKRE +L EL  RL  QERR+    S       L E G+R+    +G  AL     A +   D GG   +PR   V NPFA   GG ATTPRDHFPAFEDAL D    +  P G
Sbjct:  366 ATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSATSTALREEGEREAVAAIGTAALVVG-EAVETGRDKGGCRDTPRGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEATPGG 499

[Close]

BLAST of mRNA_H-paniculata_contig45.11324.1 vs. uniprot
Match: A0A6H5L0S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S8_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.430e-14
Identity = 65/135 (48.15%), Postives = 76/135 (56.30%), Query Frame = 0

Query:  422 ATIKTLQSELSLLKELVLSSEQKREEELSELRIRLEAQERRNRLPASDGDPQQMLSENGQRK----MGAGALNPSCRAQDDNADSGGVSPRSTG--VHNPFAAQEGGVATTPRDHFPAFEDALHDGASDDCAPSG 550
            ATI+ L++ELS L+E VL SEQKRE +L EL  RL  QERR+    S       L E G+R+    +G  AL     A +   D GG     TG  V NPFA   GG ATTPRDHFPAFEDAL D    +  P G
Sbjct:  341 ATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSTTSTTLREEGEREGVTAIGTAALVVG-EAVETARDKGGCRDTPTGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEGTPGG 474

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig45.11324.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig45.11324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQ68_ECTSI	2.040e-15	48.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L0S8_9PHAE	1.430e-14	48.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 417..462

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig45	contig	H-paniculata_contig45:45392..50931 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig45.11324.1	mRNA_H-paniculata_contig45.11324.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig45 45392..51019 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig45.11324.1 ID=prot_H-paniculata_contig45.11324.1|Name=mRNA_H-paniculata_contig45.11324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=558bp
MEAGRPADVSVRDLVEEFQTLDVDEMGDANTNAGFSDTTLEQSIGGDDIS
GIPAVDGDDEEEDDRETDDEAAADILDQVKLGAVASAIKGASLMATPSPP
KSLLCPSCFTEHDRLSKFCKFCGELVCQEPTEKSQDRAGDASVSSAPVTE
PGARQGMIADGDGDGVSDERESESEAWDSVDSEPSTGAIAPVADFHPVEG
RSHGVGSSRKSGSGDSSNPNMSSPTRPDEASSDWDCVEGESSDTISHNEN
GQRFARENIHSRDTASTDGMRSPEPHCAASLSAPRVDSTAMEKKPAVTSA
GEAAASNVRDLRPQANSRPAECLPDGRQEVQRSDTDKHSTLSPILGSRRP
VERLSSAIAMRGERRGLEPIEAVIIEGVVCSKEQDNGSSVHVVTEQGSSG
AAAVEEAVEESAAKEAAETAAATIKTLQSELSLLKELVLSSEQKREEELS
ELRIRLEAQERRNRLPASDGDPQQMLSENGQRKMGAGALNPSCRAQDDNA
DSGGVSPRSTGVHNPFAAQEGGVATTPRDHFPAFEDALHDGASDDCAPSG
NREGNNGD