prot_H-paniculata_contig44733.11279.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44733.11279.1
Unique Nameprot_H-paniculata_contig44733.11279.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length305
Homology
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A6H5JPV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPV6_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 4.900e-49
Identity = 120/352 (34.09%), Postives = 178/352 (50.57%), Query Frame = 0
Query:    1 GGSQKHGIDLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRKLDEEVYIRQAPGDQ------------------------------------------------CVYIKVNRDNFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPGTGKELTANPAGNVLLDEQGTRYYQAIVGSLICLTQSMRMDIAFSRDSNFELTGFRDASYSTGDPEKASSSLEKIMAQSTTEAELIAVSTCVKQGIYLSNILGKLVWKNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFVGLRD 304
            G  Q+ G   G  +APV R+ S R+L A+A  H W V  +D   AFLN   D +VY+R APGD+                                                CVYI V+ D   +LTIY+DD+LITG N   V++ +  LM  F MT  G+  +++GI++ +D E GT++I+Q  Y   +L+++GM+  NPV TPG G EL+     + LL  + T+ +QAI+GSL+  T  +           F L G    SY      KA      + AQ+T EAEL A+S   ++ +Y+SN + ++ ++ FRSV I  D+ GAL +A    + SR+ H+A+ F  LR+
Sbjct:   63 GHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGMSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILTIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDTQRFQAIIGSLLSTTGYL-----------FFLGGGL-ISYGA----KA----RTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFETFRSVPINSDSTGALTVASNAMFSSRTKHIALRFF-LRE 393          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A6H5KDK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK0_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 5.460e-46
Identity = 113/369 (30.62%), Postives = 183/369 (49.59%), Query Frame = 0
Query:    4 QKHGIDLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRKLDEEVYIRQAPG-------------------------------DQCVYIKVNRDNFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPG-TGKELTANPAGNVLLDEQGTRY---YQAIVGSLICLTQSM------RMDIAFSRDS----------NFELTGFRDASYSTGDPEKASSSL-----------------EKIMAQSTTEAELIAVSTCVKQGIYLSNILGKLVWKNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFVGLRD 304
            Q+ G D G ++APVCRI   R+  A+   H+W +  +D   AFLN   D +VY+R APG                               D CVY+  + +  ++LT+Y+DD+LITG +   V + +  L  +F MT  G+  +ILGID+ +D E GT++I+Q HY+ +LL++FGM + NP    G T K++  +  G++L   Q TR+   Y A+  S  C   +       + D+ + R +           F L  F D+S+    P+   S+                  + + AQST EAE+ A+S   ++ +Y+SN + +L +K F SV I  D+ GAL +AG   +  R+  +A+ +  +R+
Sbjct:   50 QEPGQDYGRSYAPVCRIGGIRMTCAIGCHHNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPDQILGPTDKKIYQSMTGSILNLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHDVRYLRGNPVLPIVYKRGQFRLAAFTDSSFGAN-PDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNATHSQRTKLVALRYFFIRE 417          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A6H5KGS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS8_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 3.670e-42
Identity = 78/206 (37.86%), Postives = 124/206 (60.19%), Query Frame = 0
Query:    1 GGSQKHGIDLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRKLDEEVYIRQAPGDQCVYIKVNR----DNFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPGTGKELTANPAGNVLLDEQGTRYYQAIVGSLICLTQSMRMDIAFS 202
            G  Q+ G D G ++APVCRI S R+  A+   ++W +  +D   AFLN   D +VY+R APG              +  ++LT+Y+DD+LITG +   V + +  L  +F MT  G+  +ILGID+ +D E GT++I+Q HY+ +LL++FGM + NPV TPG G E++ N   + +L     + YQ++ GS++ L Q  R D++++
Sbjct:   47 GHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDIVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYA 252          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A6H5JG80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG80_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.930e-41
Identity = 109/374 (29.14%), Postives = 179/374 (47.86%), Query Frame = 0
Query:    1 GGSQKHGIDLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRKLDEEVYIRQAPGD--------QCVYIKVNRDNF-----------------------IMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPGTGKE------LTANPAG----NVLLDEQ-------------GTRYYQAIVGSLICLTQSMRMDIAFSRDSNFELTGFRDASYSTGDPEKASSS----------------LEKIMAQSTTEAELIAVSTCVKQGIYLSNILGKLVWKNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFVGLRD 304
            G  Q+ G D G ++ PVCR+ S R+  A+   ++W +  +D   AFLN   D +VY+R APG         + +  K+ R  +                       ++LT+Y+DD+LITG ++  V + +  L  +F MT  G+  +ILGID+ +D + GT++I+Q H++ + L++FGM + NPV  PG G E      L ANP      N+ +D++                  + +   L CL  +  + I + R   F L  F D+S+      + SS+                 + + AQST E E+ A+S+  ++ +Y S  + +L +K F SV I  D+ GAL +AG   +  R+ H+A+    L D
Sbjct:   63 GPRQEPGQDYGRSYTPVCRVGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGELIVYKLERSLYGLSQSPALWNDTLDESLTVGNIIVILTVYVDDILITGGDHQLVDQTKKELTDRFEMTDMGEVKRILGIDVERDYQRGTLAISQEHHVNTFLERFGMQEANPVSIPGFGAEIFPRINLRANPRTHGQENLPVDDEKHPLPGPVNPAQVNMTAAEHVDSVLRCLRGNPVLPIVYRR-GQFRLAAFTDSSFGANPDNRRSSTGYLFFLAAGLISYGAKTQTLTAQSTVEPEIQALSSSAREAVYTSKFMTELNFKTFGSVPINSDSTGALTVAGNTMHSQRTKHVALSEHQLAD 435          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 2.140e-39
Identity = 98/325 (30.15%), Postives = 164/325 (50.46%), Query Frame = 0
Query:   36 SVIAMDFSTAFLNRKLDEEVYI---RQAPGDQCVYIKVNRDNFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPGTGKELTANPAGNVLLDEQGTRYYQAIVGSLICLTQSMRMDIAFS------------------------------------RDSNFELTGFRDASYSTGDPEKASSSL-----------------EKIMAQSTTEAELIAVSTCVKQGIYLSNILGKLVWKNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFVGLRD 304
            S+  +  S +  N  +++ + I   ++   D CVYI V+ D   +L IY+DD+LITG N   V++ +  LM  F MT  G+  +++GI++ +D E GT++I+Q  Y   +L+++GM+  NPV TPG G EL+     + LL  +  + +QAI GSL+ L Q  R D++++                                    +   F L+ F D+S+    P+   S+                  + + AQ+T EAEL A+S   ++ +Y+SN + ++ +K FRSV I  D+ GAL +A    + SR+ H+A+ F  LR+
Sbjct:  368 SLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGAN-PDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 691          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 7.730e-39
Identity = 98/325 (30.15%), Postives = 163/325 (50.15%), Query Frame = 0
Query:   36 SVIAMDFSTAFLNRKLDEEVYI---RQAPGDQCVYIKVNRDNFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPGTGKELTANPAGNVLLDEQGTRYYQAIVGSLICLTQSMRMDIAFS------------------------------------RDSNFELTGFRDASYSTGDPEKASSSL-----------------EKIMAQSTTEAELIAVSTCVKQGIYLSNILGKLVWKNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFVGLRD 304
            S+  +  S +  N  +++ + I   ++   D CVYI V+ D   +L IY+DD+LITG N   V+  +  LM  F MT  G+  +++GI++ +D E GT++I+Q  Y   +L+++GM+  NPV TPG G EL+     + LL  +  + +QAI GSL+ L Q  R D++++                                    +   F L+ F D+S+    P+   S+                  + + AQ+T EAEL A+S   ++ +Y+SN + ++ +K FRSV I  D+ GAL +A    + SR+ H+A+ F  LR+
Sbjct: 1147 SLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGAN-PDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRN 1470          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 7.670e-37
Identity = 96/323 (29.72%), Postives = 165/323 (51.08%), Query Frame = 0
Query:    9 DLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRKLDEEVYIRQAPGDQCVYIKVNRDNFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPGTGKELTANPAGNVLLDEQGTRYYQAIVGSLIC----------LTQSMRMDIAFSRDSNFELTGFRDASY-STGDPEKASSS---------------LEKIMAQSTTEAELIAVSTCVKQGIYLSNILGKLVW-KNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFVGLRD 304
            D G TFAPVCR++S R++ A+AA   W           ++ KL E +       D CVYI       +++T+Y+DDL++ G N   +  +++ LM +F M+  G+ + +LG+ + +D E GT++I Q  Y  S+L +FGM++  P   P  G EL+       +L+++ T+   A V S             L  +    I + R   F+LT F DA++ S  D  +++SS               L+ +   ST EAEL+A +  +K+ ++ SN++ +L + + F  V ++ +N   L + G   Y SR+ H+A+ F  +R+
Sbjct:  178 DCGGTFAPVCRLQSVRMVFAIAAEMDWEKT--------IDLKLIE-LGCNPLKSDSCVYIYKRNHTIVIITLYVDDLVVIGGNIEVIEAIKTKLMEQFQMSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEECKPTSIPSVGSELSTEQPTETVLNKEKTQSQLARVMSKAAKAHMGAAKHLLRGTQDFCITYKR-GGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRE 490          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A2N9H6T1_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H6T1_FAGSY)

HSP 1 Score: 144 bits (363), Expect = 6.640e-35
Identity = 98/311 (31.51%), Postives = 171/311 (54.98%), Query Frame = 0
Query:    1 GGSQKHGIDLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRKLDEEVYI---RQAPGDQCVYIKVNRD-NFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTP-GTGKELTAN--PAGNVLLDEQGTRYYQAIVGSLICLTQSMRMDIAFSRDSNFELTGFRDASYSTGDPEKASSSLEKIMAQSTTEAELIAVSTCVKQGIYLSNILGKLVWKNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFVGLRD 304
            G SQ+HGID    F+ V R  S R + A+ A  +  +  +D  TAFL+  L+EE+++    +   D CVY+++  D ++I L +Y+DD+LI   +   V +++S L  +F M   G A +ILG++I +D+    + ++Q +Y+  + + F M D  P+ TP      L+ +  P     ++      Y + VG L+      R ++A +  +N  + G+ DA+Y TG P    S+L+ I+A STTEAE +AV+  VK+ ++L  ++ +L   N   V + CD++ A+ LA    Y +R+ H+ + F  +R+
Sbjct:  604 GYSQRHGIDYDEVFSLVVRHTSIRAVLALVAHQNLELEQLDVKTAFLHGNLEEEIFMIGYTRCEYDCCVYVRILEDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDRGARKLWLSQKNYIRKVFENFSMLDAKPMSTPLAKNFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPNLAHAPGTN-SVVGYVDANY-TGGPICWKSTLQSIVAMSTTEAEYMAVAEAVKEVLWLKGLVKEL-GLNQGGVQMHCDSQSAIYLAKNQVYHARTKHINVRFHKIRE 911          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A6H5JST7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST7_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.590e-34
Identity = 74/230 (32.17%), Postives = 122/230 (53.04%), Query Frame = 0
Query:    1 GGSQKHGIDLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRKLDEEVYIRQAPG----------------------------DQCVYIKVNRDNFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPGTGKELTANPAGNVLLDEQGTRYYQAIVGSLICLTQSMRMDIAFS 202
            G  Q+ G D G ++AP CRI S R+  A+   ++W +  +D   AFLN   D +VY+R APG                            D CVY+  + +  ++LT+ +DD+LITG +   V + +  L  +F MT  G+          +D E GT+++ Q HY+ +LL+++GM + NPV TPG G E++ N   + +L  +  + YQ+++GS++ L Q  R D++F+
Sbjct:   47 GHRQEPGQDYGRSYAPSCRIRSIRVTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGELIVYKLERSLYGLSQTQSDPCVYVYTSGNIIVILTVNVDDILITGGDQQLVDQKKKELTDRFDMTDMGE----------RDYEQGTLAMPQEHYVNTLLERYGMQEANPVSTPGYGAEISTNQPQDQILGPRDKKIYQSMMGSILYLAQCTRFDLSFA 266          
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Match: A0A2N9G211_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G211_FAGSY)

HSP 1 Score: 142 bits (359), Expect = 2.260e-34
Identity = 102/323 (31.58%), Postives = 168/323 (52.01%), Query Frame = 0
Query:    1 GGSQKHGIDLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRKLDEEVYIRQAPG-------------DQCVYIKVNRD-NFIMLTIYIDDLLITGPNNTAVAKVRSTLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDDGNPVHTPGTGK-ELTAN--PAGNVLLDEQGTRYYQAIVGSLICLTQSMRMDIAF--SRDSNFELTGFRDASYSTGDPEKASSSLEKIMAQSTTEAELIAVSTCVKQGIYLSNILGKLVWKNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFVGLRD 304
            G SQ+HGID    F+PV R  S R + A+ A     +  +D  TAFL+  L+EE+++ Q  G             D CVY+++  D ++I L +Y+DD+LI   +   V +++S L  +F M   G A +ILG++I +D+    + ++Q +Y+  +L+KF M D  PV TP      L+ +  P     ++      Y + VG L+      R D+A   S  S    TG+      +G P    S+L+ I+A STTEAE +AV+   K+ ++L  ++ +L   N   V + CD++ A+ LA    Y +R+ H+ + F  +R+
Sbjct:  594 GYSQRHGIDYDEVFSPVVRHTSIRAVLALVAHQDLELEQLDVKTAFLHGNLEEEIFMVQPEGVQATLIGYTRCEYDCCVYVRILEDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRKDRGARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRRSTTGY--VFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKEL-GLNQGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRE 913          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44733.11279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPV6_9PHAE4.900e-4934.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KDK0_9PHAE5.460e-4630.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGS8_9PHAE3.670e-4237.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG80_9PHAE1.930e-4129.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF46_9PHAE2.140e-3930.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE7.730e-3930.15Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5J6N1_9PHAE7.670e-3729.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9H6T1_FAGSY6.640e-3531.51Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JST7_9PHAE1.590e-3432.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2N9G211_FAGSY2.260e-3431.58Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 65..157
e-value: 8.1E-19
score: 68.2
coord: 2..63
e-value: 4.4E-15
score: 56.0
NoneNo IPR availablePANTHERPTHR11439:SF287coord: 1..62
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 33..138
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44733contigH-paniculata_contig44733:286..1528 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44733.11279.1mRNA_H-paniculata_contig44733.11279.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44733 286..1528 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44733.11279.1 ID=prot_H-paniculata_contig44733.11279.1|Name=mRNA_H-paniculata_contig44733.11279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=305bp
GGSQKHGIDLGSTFAPVCRIESQRLLRAVAAVHSWSVIAMDFSTAFLNRK
LDEEVYIRQAPGDQCVYIKVNRDNFIMLTIYIDDLLITGPNNTAVAKVRS
TLMAKFTMTYFGDATQILGIDILQDKECGTISINQHHYMISLLKKFGMDD
GNPVHTPGTGKELTANPAGNVLLDEQGTRYYQAIVGSLICLTQSMRMDIA
FSRDSNFELTGFRDASYSTGDPEKASSSLEKIMAQSTTEAELIAVSTCVK
QGIYLSNILGKLVWKNFRSVGIFCDNKGALLLAGQGNYGSRSTHLAICFV
GLRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like