prot_H-paniculata_contig4470.11271.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4470.11271.1
Unique Nameprot_H-paniculata_contig4470.11271.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: D7FM89_ECTSI (Flagellar outer arm dynein 14 kDa light chain LC5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM89_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.780e-22
Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTVR 49
            VIGDSTNDASQLMKREGVRSVPSFHFWK GKKV+ VNGANE+AL  T+R
Sbjct:   72 VIGDSTNDASQLMKREGVRSVPSFHFWKDGKKVEKVNGANEEALEQTLR 120          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: A0A6H5K2L8_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L8_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 4.920e-22
Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTVR 49
            VIGDSTNDASQLMKREGVRSVPSFHFWK GKKV+ VNGANE+AL  T+R
Sbjct:  111 VIGDSTNDASQLMKREGVRSVPSFHFWKDGKKVEKVNGANEEALEQTLR 159          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: A0A835ZHZ2_9STRA (Flagellar outer arm dynein 14 kDa light chain LC5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHZ2_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.230e-18
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTVR 49
            VIGDS+  A++LMKREGVRSVPSFHFWK GKKVD VNGAN +AL  T+R
Sbjct:  100 VIGDSSQAATKLMKREGVRSVPSFHFWKDGKKVDQVNGANSEALETTIR 148          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: A0A6U3T919_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3T919_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.800e-17
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTV 48
            VIGDS+ DAS+LMKREGVRSVPSFHFWK G+K+D +NGAN DAL   +
Sbjct:  100 VIGDSSPDASKLMKREGVRSVPSFHFWKNGEKMDIINGANVDALQSAI 147          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: F0Y374_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y374_AURAN)

HSP 1 Score: 75.9 bits (185), Expect = 8.200e-17
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTVR 49
            VIGDS+ +AS LMKREGVR+VPSFHFWK G+KVD VNGAN +A+   V+
Sbjct:   38 VIGDSSAEASSLMKREGVRAVPSFHFWKNGEKVDVVNGANIEAVTSNVQ 86          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: A0A7R9U0I5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0I5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.470e-16
Identity = 34/44 (77.27%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDAL 44
            VIGDS+ +A++LMKREGVRSVP+FHFWKGG+KVD V+GAN DAL
Sbjct:   99 VIGDSSAEATKLMKREGVRSVPAFHFWKGGEKVDIVSGANPDAL 142          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: A0A4D9DEX6_9STRA (Thioredoxin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEX6_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.810e-16
Identity = 32/48 (66.67%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTV 48
            VIGDST +A QL+KREGVRSVP+FHFWK GK+VDS++GA+ + L D +
Sbjct:   97 VIGDSTPEAGQLLKREGVRSVPAFHFWKNGKRVDSISGADPERLEDVI 144          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: A0A7S3JVJ8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVJ8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.110e-16
Identity = 32/52 (61.54%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTVRSLV 52
            V GD++ DAS LMKREGVR+VPSFHFWK G++VD VNGAN DA+ ++++  +
Sbjct:   94 VTGDASADASALMKREGVRAVPSFHFWKNGERVDVVNGANIDAVTNSLQKFI 145          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: A0A7S0CE53_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CE53_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.640e-16
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDAL 44
            VIGD++ D S+LMKREGVRSVPSFHFW  GKK+D VNGAN DA+
Sbjct:  134 VIGDASQDTSKLMKREGVRSVPSFHFWVDGKKIDVVNGANADAI 177          
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Match: A0A7S2KBD8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KBD8_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.360e-15
Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTVR 49
            VIGD+T DAS+LMKREGVRSVPSFH++K G+KVD VNGAN +A+   ++
Sbjct:   92 VIGDATPDASKLMKREGVRSVPSFHYFKNGEKVDVVNGANAEAIEGAIK 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4470.11271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM89_ECTSI1.780e-2285.71Flagellar outer arm dynein 14 kDa light chain LC5 ... [more]
A0A6H5K2L8_9PHAE4.920e-2285.71Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A835ZHZ2_9STRA2.230e-1875.51Flagellar outer arm dynein 14 kDa light chain LC5 ... [more]
A0A6U3T919_9STRA1.800e-1772.92Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y374_AURAN8.200e-1769.39Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7R9U0I5_9STRA1.470e-1677.27Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9DEX6_9STRA3.810e-1666.67Thioredoxin domain-containing protein n=3 Tax=Mono... [more]
A0A7S3JVJ8_9STRA7.110e-1661.54Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0CE53_9STRA8.640e-1675.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2KBD8_9STRA1.360e-1567.35Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 8..49
e-value: 2.6E-5
score: 24.2
NoneNo IPR availableGENE3D3.40.30.10coord: 4..52
e-value: 9.2E-8
score: 33.7
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4470contigH-paniculata_contig4470:3066..3995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4470.11271.1mRNA_H-paniculata_contig4470.11271.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4470 3066..3995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4470.11271.1 ID=prot_H-paniculata_contig4470.11271.1|Name=mRNA_H-paniculata_contig4470.11271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
VIGDSTNDASQLMKREGVRSVPSFHFWKGGKKVDSVNGANEDALLDTVRS
LV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf