prot_H-paniculata_contig44640.11259.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44640.11259.1
Unique Nameprot_H-paniculata_contig44640.11259.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A0A6P4MA83_GOSAR (uncharacterized protein LOC108458679 n=1 Tax=Gossypium arboreum TaxID=29729 RepID=A0A6P4MA83_GOSAR)

HSP 1 Score: 62.0 bits (149), Expect = 3.860e-9
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGA +HM  +ST F+ YTP        IADG+++ VAG GK+ L  K    NS    L +V H+P L C+L+S+S+ +K
Sbjct:  203 WILDSGAFDHMIGNSTLFQTYTPCHNQSRIHIADGSYSPVAGVGKIQLTKK----NS----LDEVLHVPNLSCNLLSISKLTK 277          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A0A8J6D396_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D396_9ROSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.080e-8
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGA++HM+ +ST F  YTP        IADG+++ VAG G++ +    F        L KV H+P L C+L+S+S+ +K
Sbjct:  293 WILDSGASDHMTGNSTLFHTYTPCHDKSRIRIADGSYSPVAGVGEVQITENFF--------LDKVLHVPNLSCNLLSISKLTK 367          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A0A6P4Q4E7_GOSAR (probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X2 n=1 Tax=Gossypium arboreum TaxID=29729 RepID=A0A6P4Q4E7_GOSAR)

HSP 1 Score: 59.3 bits (142), Expect = 3.780e-8
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGA++HM+ +ST F  YTP        IADG+++ VAG G++ +  + F        L KV H+P L C+L+S+S+ +K
Sbjct:  184 WILDSGASDHMTGNSTLFHTYTPCHDKFRIRIADGSYSPVAGVGEVQIT-ENFS-------LDKVLHVPNLSCNLLSISKLTK 258          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A0A1Q3ALF0_CEPFO (UBN2_3 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3ALF0_CEPFO)

HSP 1 Score: 57.0 bits (136), Expect = 2.330e-7
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    7 GSPEKWTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSKI 95
            G+ E+W  +SGA++HM+ DS+ F  Y P  T     IADG+F+ VAG G + ++ K         VL  V  +P L  +L+S+S+ +K+
Sbjct:  361 GNIEQWIVDSGASDHMTGDSSLFSTYNPCSTDSTIRIADGSFSKVAGIGSV-VITKDI-------VLNTVLFVPNLDYNLLSVSQLNKV 441          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A0A438JG64_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JG64_VITVI)

HSP 1 Score: 56.2 bits (134), Expect = 4.550e-7
Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGAT+HM+ D+T F+ Y+  P ++   IADG+ + VAG G + L        S    L  V  +P L C+L+S+S+ +K
Sbjct:   67 WIVDSGATDHMTGDATIFDTYSSCPNNLTVRIADGSLSKVAGTGSVVL--------SRDLTLNSVLLVPNLDCNLLSISKLTK 141          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A0A438GX06_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GX06_VITVI)

HSP 1 Score: 55.5 bits (132), Expect = 8.510e-7
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGA++HM+ D+T F+ Y+  P ++   IADG+ + VAG G + L        S    L  V  +P L C+L+S+S+ +K
Sbjct:   51 WIVDSGASDHMTGDATIFDTYSSCPNNLTVRIADGSLSKVAGTGSVVL--------SRDLTLNSVLFVPNLDCNLLSISKLTK 125          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A0A438IWP5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IWP5_VITVI)

HSP 1 Score: 55.5 bits (132), Expect = 8.580e-7
Identity = 30/83 (36.14%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGA++HM+ D+T F+ Y+  P ++  +IADG+ + VAG G + L        S    L  V  +P L C+L+S+S+ +K
Sbjct:  290 WIVDSGASDHMTGDATIFDTYSSCPNNLTVQIADGSLSKVAGTGSVVL--------SRDLTLNSVLLVPNLDCNLLSISKLTK 364          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A0A1S2XBU5_CICAR (uncharacterized protein LOC101513206 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XBU5_CICAR)

HSP 1 Score: 55.1 bits (131), Expect = 1.180e-6
Identity = 29/83 (34.94%), Postives = 50/83 (60.24%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGAT+HM+ +S+ F +Y+P   +   +IADG+ + +AG G + L  K          L+ V H+P L C+L+S+++ +K
Sbjct:  286 WIIDSGATDHMTGESSLFSSYSPCAGNHKIKIADGSLSAIAGKGSVILSPK--------LTLKDVLHVPNLSCNLLSITKLTK 360          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: UPI0008FFA968 (uncharacterized protein LOC109122997 n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FFA968)

HSP 1 Score: 54.7 bits (130), Expect = 1.480e-6
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGA++HM+ D+T F+ Y+  P ++   IADG+ + VAG G + L        S    L  V  +P L C+L+S+S+ +K
Sbjct:  295 WIVDSGASDHMTGDATIFDTYSSCPNNLTVRIADGSLSKVAGTGSVVL--------SRDLTLNSVLLVPNLDCNLLSISKLTK 369          
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Match: A5C244_VITVI (Retrotrans_gag domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5C244_VITVI)

HSP 1 Score: 54.7 bits (130), Expect = 1.530e-6
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 0
Query:   12 WTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFATVAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSK 94
            W  +SGA++HM+ D+T F+ Y+  P ++   IADG+ + VAG G + L        S    L  V  +P L C+L+S+S+ +K
Sbjct:  443 WIVDSGASDHMTGDATIFDTYSSCPNNLTVRIADGSLSKVAGTGSVVL--------SRDLTLNSVLLVPNLDCNLLSISKLTK 517          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44640.11259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P4MA83_GOSAR3.860e-942.17uncharacterized protein LOC108458679 n=1 Tax=Gossy... [more]
A0A8J6D396_9ROSI1.080e-838.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A6P4Q4E7_GOSAR3.780e-838.55probable LRR receptor-like serine/threonine-protei... [more]
A0A1Q3ALF0_CEPFO2.330e-737.08UBN2_3 domain-containing protein n=1 Tax=Cephalotu... [more]
A0A438JG64_VITVI4.550e-737.35Retrovirus-related Pol polyprotein from transposon... [more]
A0A438GX06_VITVI8.510e-736.14Retrovirus-related Pol polyprotein from transposon... [more]
A0A438IWP5_VITVI8.580e-736.14Retrovirus-related Pol polyprotein from transposon... [more]
A0A1S2XBU5_CICAR1.180e-634.94uncharacterized protein LOC101513206 n=1 Tax=Cicer... [more]
UPI0008FFA9681.480e-636.14uncharacterized protein LOC109122997 n=1 Tax=Vitis... [more]
A5C244_VITVI1.530e-636.14Retrotrans_gag domain-containing protein n=1 Tax=V... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44640contigH-paniculata_contig44640:540..830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44640.11259.1mRNA_H-paniculata_contig44640.11259.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44640 540..830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44640.11259.1 ID=prot_H-paniculata_contig44640.11259.1|Name=mRNA_H-paniculata_contig44640.11259.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
AAVADAGSPEKWTSESGATEHMSSDSTTFENYTPAPTSIMCEIADGTFAT
VAGFGKLGLLMKQFGGNSIATVLQKVAHIPELGCDLISMSETSKITQ
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