mRNA_H-paniculata_contig4334.11051.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: A0A6H5KIJ3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIJ3_9PHAE) HSP 1 Score: 334 bits (857), Expect = 1.770e-108 Identity = 200/382 (52.36%), Postives = 247/382 (64.66%), Query Frame = 1
Query: 1 MQRQAPEDELGLSAEALAALQEFAVDHNLGDVGIGEDVEDLRLQVQECMDVKDRYHDFTFTFGEGGDDNQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWE--RWLVGKSVVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSA---------------------GMSTTQDRAQVCLERLTWGDHGAFVN----------------SHQSGFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRGISHTIDH----ENERSSMPEGCDAKEVGISTTGTGADVSESRTSTGAEEAGLCEAP-PSNSCFLLAFAKRHVSIDRVLTEAEGLGLKWKIPKDFTPTSTSENIYLMWL 1014
MQ+QA EDELGLS+ ALAAL+EFA+++N+ +G +DV D+RLQVQE MDVK R H+F+FTFG+ GDD Q+ I+L GVNPELGQTLASTGLTVWRAA+EMARF+WE RW GK VVELGAGLGLCG+LAS LC G VV+TDGGEEFT+SAM+ALR NL KN+ L A G + A+V LE+LTWG+H AF+ ++ GFDF+VAADV+Y +E VSPLLRTV D+L LR G R S DH +E + + + ++ + A S R A A P P+ S FLLAFA+R++SI+RVL EAE LGL W++P DF P S SENIYLM L
Sbjct: 1 MQQQADEDELGLSSAALAALKEFALENNM--LGGDDDVVDVRLQVQERMDVKKRTHEFSFTFGDDGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGILASKLCTGGTVVITDGGEEFTNSAMDALRANLIKNSCNLLAHSPARNGSNAAVGCGGDAAAVGAAAAGRGARVALEKLTWGEHEAFLERNGGGSDRTTDGVNDGDNRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRA--GERSDSKHPDHCPSPSHEAVAPKDETEEQDPPQPESSGPASSSSLRCQASAPPALPSLVPAPTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSL 378
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: A0A836C7F5_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7F5_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.140e-56 Identity = 133/340 (39.12%), Postives = 178/340 (52.35%), Query Frame = 1
Query: 10 QAPEDELGLSAEALAALQEFAVDHNLGDVGIGEDVEDLRLQVQECMDVKDRYHDFTFTFGEGGDDNQ------ISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWE--RWLVGKSVVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDHGAFVNSHQSGFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRGISHTIDHENERSSMPEGCDAKEVGISTTGTGADVSESRTSTGAEEAGLCEAPPSNSCFLLAFAKRHVSIDRVLTEAEGLGLKWK-IPKDFTPTSTSENIY 1002
QA E+ELGLS + L AL+EFA +L ++G+ + D R VQ+ MD R +FTF F Q +++ L GV+PELGQTLASTGLTVW AA +A +L+ + ++V+ELGAGLGLCG+L + L G VVVTDGG+EFTD A+ AL E +E+N S T + +ERLTWGDH AF+ +H+ GFD ++AADV+Y EAV PLL TV LL +A P + FLL + R+V+IDRV EA GL W+ I DF+ + ++ IY
Sbjct: 5 QADEEELGLSEDTLRALKEFA---SL-NLGLDPNAADFRRTVQDAMDTIPRNENFTFNFTSDAPQTQPGAGDAVTVELSGVSPELGQTLASTGLTVWTAARHLAHYLFHIRDQIAARTVIELGAGLGLCGILCAKL--GGSVVVTDGGDEFTDEALGALVEQVERNR-------SVTAAAFECAVERLTWGDHDAFLKAHREGFDVVIAADVIYEAEAVVPLLSTVTALL-----------------------------------------------------------QAKP-RARFLLGYTHRNVNIDRVWQEAHARGLDWREIADDFSGSESAAQIY 271
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: A0A6G0XBL9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBL9_9STRA) HSP 1 Score: 139 bits (351), Expect = 7.310e-35 Identity = 113/331 (34.14%), Postives = 161/331 (48.64%), Query Frame = 1
Query: 22 DELGLSAEALAALQEFAVDH--NLGDVGIGEDVEDLRLQVQECMDVKDRYHDFTFTFGEGGDDNQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLW-ERWLVG-KSVVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDHGAFVNSHQSGFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRGISHTIDHENERSSMPEGCDAKEVGISTTGTGADVSESRTSTGAEEAGLCEAPPSNSCFLLAFAKRHVSIDRVLTEAEGLGLKWKIPKDFTPTSTSENIY 1002
D +GLSA+ALAAL+EFA++ N+GD E D+R QVQ ++ ++ TFT+ G D I+I L G+ ++GQTL STGLT+WRA + ++ F++ ER L K V+ELG+GLGLCG+LA HL KV++TDG +E +M L EN + N G+ T + C + L WG++ Q FD ++ AD++Y E V PL T + + L + P+N F LA+ KR+VSID VL+ A +G WK P +T E IY
Sbjct: 7 DGIGLSADALAALREFALERGINVGDDSDDESF-DIRKQVQTALEEAKGPNEDTFTYKFGDD---IAIHLNGLRRDIGQTLNSTGLTLWRAGDFLSDFMFRERELFADKRVLELGSGLGLCGILAHHL--GAKVLITDGDKE----SMVLLVENCKLN------GLDTNK-----CCQELLWGEN--LTPETQGTFDVLIGADIIYEKEYVQPLFATASHI----------------------------------------------------------LARSSPAN-VFYLAYTKRNVSIDYVLSCATNVGFTWKAP------TTDEGIY 249
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: A0A833WMX4_PHYIN (Lysine methyltransferase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A833WMX4_PHYIN) HSP 1 Score: 135 bits (339), Expect = 5.250e-33 Identity = 91/236 (38.56%), Postives = 140/236 (59.32%), Query Frame = 1
Query: 19 EDELGLSAEALAALQEFAVDHNLGDVGIGEDVEDLRLQVQECMDVKDRYHDFTFTFGEGGD--DNQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWERW--LVGKSVVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDHGAFVNSHQ--SGFDFIVAADVLYADEAVSPLLRTVADLLNL-RRTQGSRG 705
E++L LS ALAALQEFA++ + + ++ D+RL +Q+ +D++ + F F FG+ GD D +I+I L G+ ++GQTL STGLT+WRA + ++ ++++ GKS++ELG+GLGL G+LAS+L + KVV+TDG D +E L N + N G+ DR + +L WG V+ HQ FD ++ AD++Y E V L +T LL RR+ G+ G
Sbjct: 9 EEQLVLSGAALAALQEFAIERG---IAVEDESSDVRLDIQKALDIEPKEDSFEFKFGKNGDEEDAEITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSEYMYQDRGRFAGKSIIELGSGLGLIGILASYLTDK-KVVITDGD----DDTIELLVANCKLN------GVG---DRVEC--RKLLWG-----VDLHQIEDKFDVVLGADIIYEQEHVVSLFKTAKYLLKPGRRSVGNGG 220
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: A0A662YF07_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF07_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.020e-32 Identity = 85/232 (36.64%), Postives = 132/232 (56.90%), Query Frame = 1
Query: 22 DELGLSAEALAALQEFAVDHNLGDVGIGEDVEDLRLQVQECMDVKDRYHDFTFTFGEGGD--DNQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWER--WLVGKSVVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDHGAFVNSHQSGFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRG 705
++L LS+ ALAALQEFA++ + + E+ D+R+++Q+ +D++ + F F FG+ D D +++I L G+ ++GQTL STGLT+WRA + ++ +++ VGKSVVELG+GLGLCG+LAS+L + +VV+TDG D +E L N + N +V +L WG + Q FD ++ AD++Y E V L +T LL T G
Sbjct: 9 EQLTLSSAALAALQEFAIERG---IAVEEEATDVRMEIQKALDIEPKEDSFVFKFGKTDDAEDAEVTIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMYANRATFVGKSVVELGSGLGLCGILASYLTDK-RVVITDGD----DDTVELLVANCKLNDV-----------ADKVECRKLLWG---VDLEQIQHKFDIVLGADIIYEQEHVVSLFQTAQYLLRPGHTSVEGG 218
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: G4YRN5_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YRN5_PHYSP) HSP 1 Score: 132 bits (333), Expect = 3.790e-32 Identity = 90/232 (38.79%), Postives = 130/232 (56.03%), Query Frame = 1
Query: 22 DELGLSAEALAALQEFAVDHNLGDVGIGEDVEDLRLQVQECMDVKDRYHDFTFTFGE--GGDDNQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWERW--LVGKSVVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDHGAFVNSHQSGFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRG 705
++L LS ALAALQEFA++ + G D D+R +Q+ +DV+ R F F FG+ G D +I+I L G+ ++GQTL STGLT+WRA + ++ F+++ GKSV+ELG+GLGL G+LAS+L +V++TDG D +E L N + N +DR Q ++L WG ++ Q FD I+ AD++Y E V L T LL R G G
Sbjct: 10 EQLMLSGAALAALQEFAIERGIAVEG---DSVDVRKDIQKALDVEPREDSFEFKFGQTQDGADAEITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDFMYQNRGRFAGKSVIELGSGLGLIGILASYLTDE-QVLITDGD----DDTIELLVANCKLNEV---------EDRVQC--QKLLWG---VDLDKIQDKFDIILGADIIYEQEHVVSLFETAKYLLKPGRRSGEDG 219
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: W7TPS1_9STRA (Nicotinamide N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPS1_9STRA) HSP 1 Score: 133 bits (334), Expect = 4.020e-32 Identity = 95/311 (30.55%), Postives = 149/311 (47.91%), Query Frame = 1
Query: 118 DLRLQVQECMDVKDRYHDFTFTFG---EGGDD--NQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWE-RWLVGKS------VVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDHGAFVNSHQSGFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRGISHTIDHENERSSMPEGCDAKEVGISTTGTGADVSESRTSTGAEEAGLCEAPPSNSCFLLAFAKRHVSIDRVLTEAEGLGLKWKIPKDFTPTSTSENIYLMWL 1014
D+R VQ+ V DR F + +G EG D + + + L G ELGQ L TGLT+WRA E++ R+LWE R ++ K ++ELG GLGLCG++A+ L +G VV+TDG M+ + N+++N+ ++R V L WG++ ++ + GFD ++AADV+Y ++A+ PLL TV LR+ Q ++ FLL++A+R+VSIDRVL A +GL ++ F+ ++ E++Y M L
Sbjct: 29 DVRKAVQDSCAVMDRDECFEYVYGAAREGTDKVHDCVRVRLHGWKKELGQQLECTGLTMWRAGEDLGRYLWENRAMLFKQGQGRQRILELGCGLGLCGLVAAQLNPKGVVVLTDGDA----LTMQKVCRNIDENSL---------KNRCCVAARTLQWGENKKIISEFKEGFDLVLAADVIYEEKAIGPLLSTVT--ATLRKGQ----------------------------------------------------------DALFLLSYARRNVSIDRVLAAASSMGLTCEVDDKFSCSAEGEHVYRMRL 266
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: A0A024U5E2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U5E2_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.820e-31 Identity = 103/329 (31.31%), Postives = 154/329 (46.81%), Query Frame = 1
Query: 22 DELGLSAEALAALQEFAVDHNLGDVGIGEDVEDLRLQVQECMDVKDRYHDFTFTFGEGGDDNQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWE--RWLVGKSVVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDHGAFVNSHQSGFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRGISHTIDHENERSSMPEGCDAKEVGISTTGTGADVSESRTSTGAEEAGLCEAPPSNSCFLLAFAKRHVSIDRVLTEAEGLGLKWKIPKDFTPTSTSENIY 1002
D +GLSA+ALAAL+EFA++ + V +D D+R +VQ ++ + ++ F++ G D I+I L G+ ++GQTL STGLT+WRA + ++ F+++ + GK +ELG+GLGLCG+LA HL V++TDG +E +M L EN + N G+ T + C ++L WG+ Q FD ++ AD++Y + V PL T + L +R I F LA+ KR+VSID VLT A G W P +T E IY
Sbjct: 7 DGIGLSADALAALREFALERGI-TVDDDDDSFDIRKEVQSALEEEKGPNEDKFSYKFGAD---IAIHLNGLRRDIGQTLNSTGLTLWRAGDFLSDFMYKNRQLFAGKRTLELGSGLGLCGILAWHLGAH--VLITDGDDE----SMVLLEENCKLN------GLDTDE-----CCKKLLWGED--LTPETQGTFDVLIGADIIYEKDYVGPLFATASHFL-------ARSSDANI----------------------------------------------------FYLAYTKRNVSIDYVLTCASNAGFSWIAP------TTDEGIY 247
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: A0A485L8G5_9STRA (Aste57867_17365 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L8G5_9STRA) HSP 1 Score: 129 bits (324), Expect = 5.050e-31 Identity = 105/328 (32.01%), Postives = 159/328 (48.48%), Query Frame = 1
Query: 28 LGLSAEALAALQEFAVDHNLGDVGIGEDVE-DLRLQVQECMDVKDRYHDFTFTFGEGGDDNQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWER--WLVGKSVVELGAGLGLCGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDHGAFVNSHQSGFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRGISHTIDHENERSSMPEGCDAKEVGISTTGTGADVSESRTSTGAEEAGLCEAPPSNSCFLLAFAKRHVSIDRVLTEAEGLGLKWKIPKDFTPTSTSENIY 1002
+GLSA+ALAAL+EFA++ + + ED + D+R +VQ ++ + ++ FT+ G D ISI L G+ ++GQTL STGLT+WRA + ++ ++++ GK V+ELG+GLGLCG+LA HL +V++TDG EE +M L EN + N G+ T ++L WG+ V Q +D ++ AD++Y + V+PL T + L+ RT +H I F LA+ KR+VSID VL+ A G +W P +T E IY
Sbjct: 9 IGLSADALAALREFAMERG---IRVDEDEDFDIRKEVQSALEEEKGPNEDQFTYNFGDD---ISIRLNGLRRDIGQTLNSTGLTLWRAGDFLSDYMFKNKDLFAGKRVLELGSGLGLCGILAWHL--GAEVLITDGDEE----SMVLLLENCKLN------GLDT-----DTMCKQLLWGEE--LVPETQGSYDVLIGADIIYEKQYVAPLFATASHFLS--RT------AHNI----------------------------------------------------FYLAYTKRNVSIDYVLSCATDAGFQWIAP------TTDEGIY 245
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Match: A0A7R9UBL8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBL8_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.430e-30 Identity = 112/335 (33.43%), Postives = 151/335 (45.07%), Query Frame = 1
Query: 10 QAPEDELGLSAEALAALQEFAVDHNLGDVGIGEDVEDLRLQVQECMDVKDRYHDFTFTFGEGGDDNQISISLRGVNPELGQTLASTGLTVWRAAEEMARFLWERWLV------GKSVVELGAGLGL----CGVLASHLCRRGKVVVTDGGEEFTDSAMEALRENLEKNTFQLSAGMSTTQDRAQVCLERLTWGDH-----GAFVNSHQS---GFDFIVAADVLYADEAVSPLLRTVADLLNLRRTQGSRGISHTIDHENERSSMPEGCDAKEVGISTTGTGADVSESRTSTGAEEAGLCEAPPSNSCFLLAFAKRHVSIDRVLTEAEGLGLKWKI 960
QAPE+ELGLSA ALAAL EFA+D+ G + + +R QVQ + + + FTF G + +++ G +LGQTL+STGLTVW AE++A +LW V K VVELGAGLGL CG + + G V+ TDG D+++E LR N+E N L A Q + RL WG A H D I+AADV+Y +EAV PL TV ++ RT G C F+L+F +R VS RV+ AE +GL+++I
Sbjct: 12 QAPEEELGLSAAALAALAEFALDN--GILAEADADSSIRQQVQSHFEALEPEKEELFTFEYG----HVRLTMEGWRRDLGQTLSSTGLTVWSGAEDLAAYLWRHRAVLFPEKSQKVVVELGAGLGLPGILCGAIMALASDSGTVICTDGD----DNSLEKLRRNVEINGELLGA--------VQTEVLRLRWGQDLRVLDEALERLHGEDGRAVDLIIAADVIYQEEAVEPLFATVQQIM---RTSGRSXXXXXXXXX---------------------------------------XC-------VFILSFTRRGVSYGRVIDAAEAVGLEYRI 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4334.11051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4334.11051.1 >prot_H-paniculata_contig4334.11051.1 ID=prot_H-paniculata_contig4334.11051.1|Name=mRNA_H-paniculata_contig4334.11051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=340bp MQRQAPEDELGLSAEALAALQEFAVDHNLGDVGIGEDVEDLRLQVQECMDback to top mRNA from alignment at H-paniculata_contig4334:1117..5722- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4334.11051.1 ID=mRNA_H-paniculata_contig4334.11051.1|Name=mRNA_H-paniculata_contig4334.11051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4606bp|location=Sequence derived from alignment at H-paniculata_contig4334:1117..5722- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4334:1117..5722- >mRNA_H-paniculata_contig4334.11051.1 ID=mRNA_H-paniculata_contig4334.11051.1|Name=mRNA_H-paniculata_contig4334.11051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2040bp|location=Sequence derived from alignment at H-paniculata_contig4334:1117..5722- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |