prot_H-paniculata_contig4329.11041.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4329.11041.1
Unique Nameprot_H-paniculata_contig4329.11041.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length435
Homology
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BLAST of mRNA_H-paniculata_contig4329.11041.1 vs. uniprot
Match: D8LKZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ1_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 1.850e-152
Identity = 239/377 (63.40%), Postives = 274/377 (72.68%), Query Frame = 0 
Query:   55 SGQYRDDSEAWYRVLSEPGVELLEGPDADGPKMLEMYLTGKAFCVSERFQPPSGDRSDDGSHAYLKIKDREAWVLQSRKGE-EERCTKLPPPTDEVIEQWYRVEYPGGVRLRASPSFEHTHPSLGVLVCGWVFLSTKRYRAPGSSHLFLQVATPEGVVKDISVHRQRSSSGVTGNPNGSANGAXXXXXXPQ-----GGERRESGWVPASSNGVEVVVETKEPWIEKGIFAYQVVVDEILPAKNGPHKLAPSLLQHLPPYSVAAVATFLETGNGDEGFVQLAGTGSWVLARRGQTSNMVRLPAFPEVDKTPRRFVVSAPNGLETIVGPSAAAPGTGQVLAPGTKGRSEMVWSVRGWPGGRGKDDTRFVLLDDMGWVQL 425
            +G YRDDSEAWY+V+ E GVELLE PDA   +MLE++L GKAFCVSERFQPP     + GS  +LK+K REAWV+Q  + + EE C KLPPP DE +EQWYRV+YPGGVRLRASP+FEHT PSLGVLVCGWVFL+T+RYRAPGSSH+ LQVATPEGVV+D S     S  G T +  GS++         +      G RR  GWVP++SNG EVVV                  DE L A  GPH  AP   Q LPPYSVAA ATFLETG+G EGFVQLAGTGSWVL+RRGQ + MVRLPAFP VDKTPRRFVVSAP G+ET+VGPS +AP TGQ+L  G +G SEMVWSV+GWPG RG  D RFVLL+ MGWVQL
Sbjct:  218 TGHYRDDSEAWYQVVDESGVELLEAPDAGSTRMLELFLPGKAFCVSERFQPP-----EQGS-TFLKVKGREAWVVQRAESDGEEACKKLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSHMLLQVATPEGVVRDSS-----SEYGETVDVYGSSSDDSDWDNEDELEQARRGARRHCGWVPSTSNGEEVVV------------------DETLLANTGPHVNAPGSPQQLPPYSVAAAATFLETGDGLEGFVQLAGTGSWVLSRRGQDTKMVRLPAFPRVDKTPRRFVVSAPGGVETVVGPSPSAPRTGQLLPLGAEGSSEMVWSVKGWPGDRGVGDRRFVLLEGMGWVQL 565
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4329.11041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKZ1_ECTSI1.850e-15263.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..435
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4329contigH-paniculata_contig4329:2416..9885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4329.11041.1mRNA_H-paniculata_contig4329.11041.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4329 2416..10244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4329.11041.1 ID=prot_H-paniculata_contig4329.11041.1|Name=mRNA_H-paniculata_contig4329.11041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp
MVWLHHAVKDLGRWIQYPSHHKKSRDLFLLLIFFVVPDFFGNVSANWAMD
HDCSSGQYRDDSEAWYRVLSEPGVELLEGPDADGPKMLEMYLTGKAFCVS
ERFQPPSGDRSDDGSHAYLKIKDREAWVLQSRKGEEERCTKLPPPTDEVI
EQWYRVEYPGGVRLRASPSFEHTHPSLGVLVCGWVFLSTKRYRAPGSSHL
FLQVATPEGVVKDISVHRQRSSSGVTGNPNGSANGAGGGEDGPQGGERRE
SGWVPASSNGVEVVVETKEPWIEKGIFAYQVVVDEILPAKNGPHKLAPSL
LQHLPPYSVAAVATFLETGNGDEGFVQLAGTGSWVLARRGQTSNMVRLPA
FPEVDKTPRRFVVSAPNGLETIVGPSAAAPGTGQVLAPGTKGRSEMVWSV
RGWPGGRGKDDTRFVLLDDMGWVQLQGVGVDGDDV
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