mRNA_H-paniculata_contig4322.11030.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: A0A6H5L9W6_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9W6_9PHAE) HSP 1 Score: 462 bits (1188), Expect = 1.420e-149 Identity = 212/319 (66.46%), Postives = 260/319 (81.50%), Query Frame = 2
Query: 2159 WTPPVIAMDDPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEA---GSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSIDGEWFDVPPRPGAFVCNLGDMLQRW---TNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNFSKNQ*CDQ 3097
W PPV+ M+ P AP ++AKACKEFGFFY+E HG+ +D+MREVF QSKAFF+L ++KM++ A + NRG+TPMHEE+LD Q KGDTKEGYYIFRE+ G ED +PL+GPN+WP+ L+P W++TM YF +MH +G++L+GLL+ GLGLDP FF S SE ALRLLHYS+EVSDP KGV+G GAHSDYGL+T+LATDEVPGLQV ++GEW DVPPR GAF+CNLGDMLQRW TND LRSTVHRVVNKLGRERYSIPFFFE NFDT+VVCLPQ CSE+NPA+YPP +G ++++KYS+TH +F NQ D+
Sbjct: 2 WEPPVVDMESPEAPKVLAKACKEFGFFYVENHGVSKDVMREVFRQSKAFFSLGIDDKMALKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDDARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLNGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQQNDE 320
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: D7FYW9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW9_ECTSI) HSP 1 Score: 457 bits (1176), Expect = 8.580e-148 Identity = 210/314 (66.88%), Postives = 253/314 (80.57%), Query Frame = 2
Query: 2159 WTPPVIAMDDPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGS-----EDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSIDGEWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNFSKNQ 3085
W PPV+ MD +AP ++AKAC++FGFFY+E HG+ E++MREVF QSK FF+L ++KMSV A K NRGYTPMHE+VLD ENQ+KGDTKEGYYIFRE AG+ D +PL GPN+WP+ L+P WK+TM +F MH +G +L GLL+ GLGLDP F + FSE LRLLHYS+EVSDPGKGV+G GAH+D+GLMT+LATDEVPGLQV ++G+W D+PPR GAF+CNLGDMLQRWTND LRSTVHRVVNKLG ERYSIPFFFEPNFDT+V C PQFCSE+NPARYPP +G +L+ KYS+TH +F Q
Sbjct: 2 WAPPVVDMDSSSAPAVLAKACRDFGFFYVENHGVSEEVMREVFRQSKLFFSLGMDDKMSVRADKNNRGYTPMHEQVLDLENQTKGDTKEGYYIFREGSAGAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFGTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLNGKWLDIPPRKGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGYQ 315
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: A0A7J7QM00_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QM00_9CHLO) HSP 1 Score: 365 bits (938), Expect = 4.310e-113 Identity = 167/304 (54.93%), Postives = 221/304 (72.70%), Query Frame = 2
Query: 2174 IAMDDPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSIDGEWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNFSKNQ 3085
++ D+ AA + AC GFFY HGIP++++ EVF Q +A FA+P E KM++LA + NRGYTP EE LD Q++GDTKEG+Y RE+ A SE+ PL GPN+WP L+P ++ T+ AYF+++ LG++L LLA LGL P++FA F+ PM ALR LHY++EVS PG+GV G GAHSDYG++T+LATDEVPGLQV ++G W +V P PGAF+ NLGDML+RWTN +ST+HRV+N G+ERYSIPFFFEPNF +V CLP SE PA YPPT +G+HL+ Y++TH + N+
Sbjct: 14 LSQDEAAAAQQVYAACSGPGFFYAANHGIPQELLSEVFRQMRAAFAMPDEAKMAMLADENNRGYTPYAEETLDPAQQARGDTKEGFYFGREVSADSEEGKLPLHGPNQWPPEQLVPGFRLTVTAYFDALAALGMRLLRLLALSLGLPPDYFAPHFTHPMVALRPLHYTAEVSAPGQGVFGAGAHSDYGMLTLLATDEVPGLQVHLNGSWQEVAPLPGAFIVNLGDMLERWTNGLFKSTLHRVINTTGQERYSIPFFFEPNFTAKVECLPCCVSEARPAAYPPTTAGEHLLAMYAQTHAGYDVNK 317
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: D8TU52_VOLCA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TU52_VOLCA) HSP 1 Score: 358 bits (918), Expect = 2.170e-110 Identity = 167/298 (56.04%), Postives = 207/298 (69.46%), Query Frame = 2
Query: 2207 IAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSIDG---------EWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNF 3073
+ AC GFFY+ HG+ E ++ + F+Q +A FALP E KM++L + NRGYTP EE LD +Q GDTKEG+Y REI SE+ KPL GPN+WP LLPR++ Y+E+++GLG++L L+A L L P++FA+ F PM ALR LHYS E SDPG GV G GAHSDYG++T+LATD+VPGLQV G W+DV P PG F+ NLGDML+RWTN RST+HRV+N GRERYSI FFFEPNFD QVV LP C DNP RYPPT +GQHL+DKY+ TH +
Sbjct: 1 VRAACISSGFFYVSNHGVAESLVYDTFQQQRALFALPLESKMALLQNENNRGYTPFREETLDPAHQKHGDTKEGFYFGREIPEDSEEVSKPLHGPNQWPDPQLLPRYREVTWQYYEALYGLGMRLLRLVALSLDLPPDYFAAAFDRPMVALRPLHYSGERSDPGAGVFGAGAHSDYGMLTILATDDVPGLQVGGAGGRGRAGGNRRWWDVEPIPGTFIINLGDMLERWTNGRYRSTLHRVINTTGRERYSIAFFFEPNFDAQVVALPCCCGPDNPPRYPPTTAGQHLLDKYAATHAGY 298
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: A0A8J9RD93_9CHLO (2-oxoglutarate-Fe(II) type oxidoreductase hxnY n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RD93_9CHLO) HSP 1 Score: 352 bits (904), Expect = 4.700e-108 Identity = 157/300 (52.33%), Postives = 215/300 (71.67%), Query Frame = 2
Query: 2174 IAMDDPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSIDGEWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNF 3073
+++ + A + KAC + GFFY+ HGI ED++ EVFEQ+++FFALP K ++A + NRG+TP+ EE LD+ENQ++GDTKEG Y RE+ A S +A + L GPN+WP+ LLP ++ +AYF+++ LG++L LLA L ++P+FF F PM LR LHY S P +G+ GAH+DYG++T+L TD+ PGLQ+ G + D+PP+PGAF+ NLGDML+RWTN +ST+HRV+ R RYSIPFFFEP+FDT+V CLP CS DNP RYPPT SGQHL+DKY++TH +
Sbjct: 10 LSLPEHALSAQLRKACTDTGFFYVANHGIAEDLIEEVFEQNRSFFALPEASKREIVADENNRGWTPLSEETLDTENQTEGDTKEGLYFGREVPADSPEAAQFLHGPNQWPSPGLLPEYRRVTMAYFDAVTALGMRLLRLLALALNMEPDFFLPMFQRPMLFLRPLHYIPRRSQPDQGIFAAGAHTDYGMLTLLKTDDAPGLQIWSGGRFVDIPPKPGAFIVNLGDMLERWTNGLFKSTLHRVITDGSRHRYSIPFFFEPDFDTRVECLPCCCSPDNPPRYPPTTSGQHLLDKYAQTHSGY 309
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: A0A250WWS1_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWS1_9CHLO) HSP 1 Score: 351 bits (901), Expect = 2.170e-107 Identity = 164/305 (53.77%), Postives = 210/305 (68.85%), Query Frame = 2
Query: 2168 PVI--AMDDPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSIDGEWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNFS 3076
PVI A+ + A ++ AC GFFY+E HG+ ++ E F Q+K F+LP EEK +LA K NRG+TP EE LD Q +GDTKEG+Y RE+ A S +ALKPL GPN+WP L+P + T YFE + LG++L LLA L L P +F +F PM LR LHYS +SDPG+G+ G GAH+DYG++T+LATDEVPGLQ+ +G+W V PR GAF+ NLGDM++RWTN +ST+HRV+N G ERYSI +FFEP FD V CLPQ C DNP RYPPT +GQHL+DKY+ TH ++
Sbjct: 37 PVINMALAEGDAAKLVRDACMGPGFFYVENHGVDSQLINETFSQTKKLFSLPLEEKKRLLADKNNRGWTPYQEETLDPAVQKQGDTKEGFYFGREVPADSPEALKPLHGPNQWPEESLMPGLRDTYQQYFEELRALGMRLLRLLALALDLPPLYFHPYFEPPMIMLRPLHYSGVISDPGEGIFGAGAHTDYGMLTILATDEVPGLQIRQNGKWTHVSPRNGAFIINLGDMVERWTNGSFKSTLHRVINTTGSERYSIAYFFEPCFDAVVECLPQCCGGDNPPRYPPTTAGQHLLDKYAATHAGYT 341
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: A0A836BN92_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BN92_9CHLO) HSP 1 Score: 350 bits (898), Expect = 6.670e-107 Identity = 166/323 (51.39%), Postives = 215/323 (66.56%), Query Frame = 2
Query: 2174 IAMDDPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSID-----------------------GEWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNF 3073
+++ +P A +A AC GFFY+ HG+P++++ VFEQ +A FALP E+KM++L + NRGYTP EE LD Q GDTKEG+Y RE+ A S +A KPL GPN+WP LP ++ Y+E+++GLG++L LLA LGL P+ F F +PM LR LHY++E+SDPG GV G GAH+DYG++T+LATD VPGLQ+ + G W+DVPP PGAFV NLGDML+RWTN RST+HRVVN +GRERYSI FFFEP+FD +V LP +P RYPPT SGQHL+DKY+ TH +
Sbjct: 21 MSLPEPQAAAQVAAACARSGFFYVTHHGVPQELVDAVFEQQRAVFALPQEDKMALLQDRNNRGYTPFREETLDPARQRHGDTKEGFYFGREVAADSPEASKPLHGPNQWPDPARLPHYRQATWQYYEALYGLGMRLLRLLALSLGLPPDHFHPAFEQPMVTLRPLHYTAEISDPGAGVFGAGAHTDYGMVTILATDTVPGLQIWLPEGEGAEGQGAGHDAAEAAPGPGRGRWWDVPPVPGAFVVNLGDMLERWTNGRYRSTLHRVVNTVGRERYSIAFFFEPSFDARVEVLPCCTGPADPPRYPPTTSGQHLLDKYAATHAGY 343
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: I0Z511_COCSC (Oxygenase-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z511_COCSC) HSP 1 Score: 342 bits (877), Expect = 2.160e-104 Identity = 154/291 (52.92%), Postives = 204/291 (70.10%), Query Frame = 2
Query: 2207 IAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSID--GEWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNF 3073
+ KAC + GFFY+ HG+ +D++ ++FE+++ FFALP + +L K NRG+TP+ EE LD NQ++GDTKEG Y RE+ A S +A +P GPN+WP+ LLP ++ YF ++ LG+++ LLA LGL P++F F PM LR LHY S P +G+ GAHSDYG++T+LATD+ PGLQ+ + G + DVPP+PGAF+ NLGDML+RWTN +ST+HRVV R RYSIPFFFEPNFDT+V CLP C DNP RYPPT SGQHL+DKY++TH F
Sbjct: 12 LRKACIDTGFFYVFNHGVAQDLIEQIFEENRKFFALPEAARREILVDKNNRGWTPLSEETLDRANQTEGDTKEGLYFGREVPADSTEAAQPFTGPNQWPSPELLPEYRRVTNTYFSAVTDLGMRMLRLLALALGLAPDYFLPMFGRPMLFLRPLHYIPRRSQPDQGIFAAGAHSDYGMLTLLATDDAPGLQIWLPSAGRFVDVPPKPGAFIVNLGDMLERWTNGLFKSTLHRVVTDGSRHRYSIPFFFEPNFDTRVECLPCCCGPDNPPRYPPTTSGQHLLDKYAQTHAGF 302
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: A0A7R9YQ36_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YQ36_9CHLO) HSP 1 Score: 342 bits (876), Expect = 2.530e-104 Identity = 161/305 (52.79%), Postives = 204/305 (66.89%), Query Frame = 2
Query: 2168 PVIAMD--DPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQVSIDGEWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSEDNPARYPPTLSGQHLIDKYSETHVNFS 3076
PVI M +P A + AC GFFY+ HG+ +++ F+++++ FALP EEK +L K NRG+TP EE LD NQ+ GDTKEG+Y REI A S +A KPL GPN+WP L+P + YF ++ LG +L L+A L L P+ F F +P+ +LR LHYS S PG GV G GAH+DYG++T+L TDEVPGLQ+ G W DVPP PGAF+ NLGDML+RWTN ST+HRVVN G+ERYSI FFFEPNF+ V CLPQ C D P +YPPT +GQHL+DKY+ TH +S
Sbjct: 7 PVIDMSLPEPEAAAAMRAACVGPGFFYVSNHGVDGELVDLTFDRTRSLFALPLEEKQRLLQDKNNRGWTPFQEETLDPANQTCGDTKEGFYFGREIAADSPEASKPLHGPNQWPDEALVPGLRDAYTRYFNALWALGTKLLRLVALALDLPPDHFDPHFQQPIVSLRPLHYSGTKSAPGDGVFGAGAHTDYGMLTILKTDEVPGLQIHTSGAWRDVPPMPGAFIINLGDMLERWTNGMFHSTLHRVVNTTGQERYSIAFFFEPNFEAIVECLPQCCGPDRPPKYPPTTAGQHLLDKYAATHAGYS 311
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Match: A0A150G899_GONPE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G899_GONPE) HSP 1 Score: 342 bits (876), Expect = 5.490e-104 Identity = 167/323 (51.70%), Postives = 207/323 (64.09%), Query Frame = 2
Query: 2174 IAMDDPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEQSKAFFALPTEEKMSVLAGKKNRGYTPMHEEVLDSENQSKGDTKEGYYIFREIEAGSEDALKPLRGPNRWPANVLLPRWKSTMLAYFESMHGLGIQLTGLLATGLGLDPEFFASFFSEPMSALRLLHYSSEVSDPGKGVLGTGAHSDYGLMTMLATDEVPGLQV--------------------SIDGEWFDVPPRPGAFVCNLGDMLQRWTNDYLRSTVHRVVNKLGRERYSIPFFFEPNFDTQVVCLPQFCSED--NPARYPPTLSGQHLIDKYSETHVNFS 3076
+ + AA + AC GFFY+ HG+P ++ E F Q +A F LP E KM++L NRGYTP EE LD Q+ GDTKEG+Y RE+ S +A KPL GPN+WP LLP ++ YF++M LG++L LLA L L P++FA F PM ALR LHYS EVSDPG GV G GAHSDYG++T+LATDEVPGLQ+ + G W+DVPP+PGAFV NLGDML+RWTN RST+HRV+N GRERYS+ FFFEPNFD V LP C+ P RYPPT +G+HL+DKY+ TH +S
Sbjct: 9 LGQTEDAAAAEVRAACTSSGFFYVRNHGVPAPLVEEAFAQQRALFGLPLEAKMAMLQDANNRGYTPFREETLDPARQAHGDTKEGFYFGREVPLDSPEASKPLHGPNQWPDPQLLPDYRRVTQQYFDAMTALGMRLLRLLALSLELPPDYFAPMFDAPMLALRPLHYSGEVSDPGAGVFGAGAHSDYGMLTILATDEVPGLQIWLPDGGPEAAADAGAARGEEGVGGRWWDVPPQPGAFVINLGDMLERWTNGRYRSTLHRVINTTGRERYSVAFFFEPNFDCPVEVLP-CCTGGVHGPPRYPPTTAGRHLLDKYAATHAGYS 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4322.11030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4322.11030.1 >prot_H-paniculata_contig4322.11030.1 ID=prot_H-paniculata_contig4322.11030.1|Name=mRNA_H-paniculata_contig4322.11030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp MSATGTWTPPVIAMDDPAAPTIIAKACKEFGFFYLEKHGIPEDMMREVFEback to top mRNA from alignment at H-paniculata_contig4322:6593..15591- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4322.11030.1 ID=mRNA_H-paniculata_contig4322.11030.1|Name=mRNA_H-paniculata_contig4322.11030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8999bp|location=Sequence derived from alignment at H-paniculata_contig4322:6593..15591- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4322:6593..15591- >mRNA_H-paniculata_contig4322.11030.1 ID=mRNA_H-paniculata_contig4322.11030.1|Name=mRNA_H-paniculata_contig4322.11030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at H-paniculata_contig4322:6593..15591- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |