mRNA_H-paniculata_contig4318.11021.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4318.11021.1 vs. uniprot
Match: D7G7T3_ECTSI (GDSL-lilke lipase/acylhydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T3_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 7.320e-145 Identity = 214/297 (72.05%), Postives = 247/297 (83.16%), Query Frame = 2
Query: 290 SSDLKVALVGDSVLDDHYWLRQPTEDVREQTERTLRQTYPSRSVEVLNFAVDESTVSCVIEGRAPDSRYRDGRKKAGMEPYPVDNDGVVRPLPLLRTAKPTHVVLSVGGNDARARFLQSLNPDVITQLMITDGLVANLRGLIEIIRSEITPNIILVYIFMPQFVAVPLLSLLPPARILHRLLVNFSKFFIELATEYRLPVIDLSRTFDPNQKEHYGSTPIEPSNVSGQFIADLIAQVISEFRFGDEISGKVFSGVGQEKRVQDLSPDSG--FNYEKELQQFFDWKRSEDKSYHCTIG 1174
+SDL VALVGDSVLDDHYWL P DVR QTERTL+ YP RS+ V NFAVDEST+SCV+ GRAP + YR+GR+KA MEPYPV+ DGVVRPL LLR AKPTHVVLS+GGNDAR RFLQS NPDV+T+LMITDG VANLR ++E IR+EITPNIILVY++MP+F PLLS+LPPARIL RLLVNFSKFFIELA E+ LP+IDLSRTFDPN K+HYGSTPIEPSNVSGQFIADL+AQV++ FRFG+E GK+FSG G E V DL+PD+ F+Y +ELQ FFD K +E + C IG
Sbjct: 3 TSDLNVALVGDSVLDDHYWLDHPPNDVRAQTERTLKIAYPDRSIRVDNFAVDESTISCVLRGRAPAAHYRNGRRKAKMEPYPVEEDGVVRPLKLLREAKPTHVVLSIGGNDARIRFLQSRNPDVVTELMITDGFVANLRRVVETIRAEITPNIILVYVYMPEFKTFPLLSMLPPARILQRLLVNFSKFFIELAVEFHLPIIDLSRTFDPNNKKHYGSTPIEPSNVSGQFIADLVAQVLARFRFGEEAGGKIFSGTGGELVVHDLAPDAAARFSYGRELQAFFDRKAAEKPATSCVIG 299
BLAST of mRNA_H-paniculata_contig4318.11021.1 vs. uniprot
Match: A0A7S2TYU9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYU9_9EUKA) HSP 1 Score: 208 bits (529), Expect = 1.850e-58 Identity = 121/279 (43.37%), Postives = 171/279 (61.29%), Query Frame = 2
Query: 305 VALVGDSVLDDHYWLRQPTEDVREQTERTLRQTYPSRSVEVLNFAVDESTVSCVIEGRAPDSRYRDGRKKAGMEPYPVDNDGVVRPLPLLRTAK-PTHVVLSVGGNDARARFLQSLNPDVITQLMITDGLVANLRGLIEIIRSEITPNIILVYIFMPQFVAVPLLSLLPPARILHRLLVNFSKFFIELATEYRLPVIDLSRTFDPNQKEHYGSTPIEPSNVSGQFIADLIAQVISEFRFGDEISGKVFSGVGQEKRVQDLSPDSGFNYEKELQQFFDWK 1138
V L+GDSVLD YWLR +DVR + ER L++ ++ + N+AVDES + V+ G P+ Y R+ MEPYP+D GVVRPL LLR K PTHV+LSVGGNDARA F+ S + D I M+ +G++ L+ I++ + PN+ILV ++ PQ A P + +LP A + L+V FS F ++A +++LPVIDL+RTF+P YGS+PIEPSN SG IA+L +I +F F + KV++G+ + DSG+ K + WK
Sbjct: 22 VVLMGDSVLDTFYWLRDKKKDVRYEMERLLKED--NKDSKCTNYAVDESQIDHVLVGICPNPGYVRSRRWNKMEPYPMDQRGVVRPLVLLRELKDPTHVLLSVGGNDARAAFVSSFDIDNIYITMVENGIIERFERLVAEIKN-VVPNLILVIVYHPQITACPFVYMLPKAATITELIVRFSPMFFDIAKKFKLPVIDLARTFNPYDSNDYGSSPIEPSNTSGIMIAELAKYIIHDFDFNKD-DAKVYTGL--------VGKDSGYRALKVERLDDSWK 288
BLAST of mRNA_H-paniculata_contig4318.11021.1 vs. uniprot
Match: A0A7S4DZ50_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DZ50_9EUKA) HSP 1 Score: 99.8 bits (247), Expect = 3.030e-21 Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = 2
Query: 686 GLVANLRGLIEIIRSEITPNIILVYIFMPQFVAVPLLSLLPPARILHRLLVNFSKFFIELATEYRLPVIDLSRTFDPNQKEHYGSTPIEPSNVSGQFIADLIAQVISEFRFGDE 1027
G++ L+ I+S + PN+ILV ++ PQ + P L +LP A + L+V FS F +A ++++PVIDL+RTF+P YGS+PIEPSN SG IA+L +I F FG E
Sbjct: 4 GIIERFERLVTEIQS-VVPNVILVIVYHPQITSCPFLYMLPNAATITELIVKFSPMFFNIARKFKVPVIDLARTFNPYDSSDYGSSPIEPSNTSGIMIAELALHIIHHFEFGKE 116
BLAST of mRNA_H-paniculata_contig4318.11021.1 vs. uniprot
Match: A0A1Q9EC56_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EC56_SYMMI) HSP 1 Score: 85.5 bits (210), Expect = 4.050e-14 Identity = 86/283 (30.39%), Postives = 129/283 (45.58%), Query Frame = 2
Query: 314 VGDSVLDDHYWLRQPTEDVREQTERTLRQTYPS--RSVEVLNFAVDESTVSCVIEGRA---PDSRYRDGRKKAGMEP-----YPVDNDGVVRPLPLLRTAKPTH-VVLSVGGNDA------RARFLQSLNPDVI-TQLMITDGLVANLRGLIEIIRSEITP-NIILVYIFMPQ-----FVAVPLLS---------LLPPARILHR-----LLVNFSKFFIELATEYRLPVIDLSRTFDPNQKEHYGSTPI-------------EPSNVSGQFIADLIAQVISE 1009
+GDSVLD+ +WL P+ +R Q + TL ++ + R ++V+N AVD+ T E A P Y R+K E Y VD DG++R + L++ V+LS+GGND + R + SL P + + A L+ + E ++ ++LV + P P+ L AR L R L+ + LA + PVIDLS+TFD + +EHYG+ I EPS+VS FIA LIA I++
Sbjct: 1 MGDSVLDNFFWLETPSRPLRVQLQETLGKSRDAKVRQLQVVNLAVDQMTTFDFEERSASANPWDVYAQAREKVDFEAEEDKKYMVDQDGIIRSVKNLKSLNNVRWVILSLGGNDVYLNSGVKTRLINSLVPGSEGVRKEVAKEFGARLKKVAEQVQKAAPDATLVLVVPYQPHEEFSLLAGAPINDEGARIYGDFLGDGARGLERQLLPDLVTPMVTEILTLAQDLDCPVIDLSQTFDSSMEEHYGTGEIGRVNSLGTPWSGAEPSDVSSNFIAQLIANAIAQ 283
BLAST of mRNA_H-paniculata_contig4318.11021.1 vs. uniprot
Match: A0A813EBC2_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EBC2_POLGL) HSP 1 Score: 82.0 bits (201), Expect = 7.270e-13 Identity = 90/303 (29.70%), Postives = 129/303 (42.57%), Query Frame = 2
Query: 260 AVQHAMETAPSSDLKVALVGDSVLDDHYWLRQPTEDVREQTERTLR--QTYPSRSVEVLNFAVDESTVSCVIEGRA---PDSRYRDGRKKAGMEP-----YPVDNDGVVRPLPLLRTAKPTH-VVLSVGGNDA------RARFLQSLNPDVITQLM-ITDGLVANLRGLI-EIIRSEITPNIILVYIFMPQFVAVPLLSLLPPARI-----------------------LHRLLVNFSKFFIELATEYRLPVIDLSRTFDPNQKEHYGSTPI-------------EPSNVSGQFIADLIAQVI 1003
A + + A S+ +V L+GDSVLD+ YWL P + +R Q E LR + +++ +N AVD+ T IE +A P + RK G E Y V DG +R + L+ K VLS+GGND + L SL P + + + + LR + E+ ++ ++LV + P SLL A I L L+ K + A E V+DLSRT DP +EHYG+ I EPSN+S FIA L+ I
Sbjct: 77 AAVASTQAAESTRDQVVLLGDSVLDNFYWLEDPKQHLRVQLEEELRASRNQKIKALACVNLAVDQMTTFDFIERKAAQNPWEPFAAARKLVGFEDPQDEEYVVGKDGSIRSVKNLKRLKAVRWAVLSLGGNDVYLNSQVQTSLLTSLLPPFKQKRVEVAEAFGQRLRKAVAELRKAAPEAALVLVIPYQPH----KDFSLLLGAPINAEGERIAGDFTGDIPRNLERQNLSDLVTPMIKEILATAREVGCAVVDLSRTLDPECEEHYGTGEIGRVNALGAPWSGAEPSNLSSGFIAKLLVHAI 375
BLAST of mRNA_H-paniculata_contig4318.11021.1 vs. uniprot
Match: A0A813EV29_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EV29_POLGL) HSP 1 Score: 75.1 bits (183), Expect = 2.920e-10 Identity = 92/310 (29.68%), Postives = 132/310 (42.58%), Query Frame = 2
Query: 167 PVIASA*LAAAIFRLFEG-K*LRERAR---------LG*RIAVQHAMETAPSSDLKVALVGDSVLDDHYWLRQPTEDVREQTERTLR--QTYPSRSVEVLNFAVDESTVSCVIEGRA---PDSRYRDGRKKAGMEP-----YPVDNDGVVRPLPLLRTAKPTH-VVLSVGGNDA------RARFLQSLNPDVITQLM-ITDGLVANLRGLIEIIRSEITPNIILVYIFMPQFVAVPLLSLLPP----------------ARILHR-----LLVNFSKFFIELATEYRLPVIDLSRTFDPNQKEHYGSTPI 949
P + +A +A+A + + G + +R R++ L +A A E+ D KV L+GDSVLD+ YWL P + +R Q E LR + +++ +N AVD+ T IE + P Y RK G E Y V DG +R + L+ K VLS+GGND + L SL P + + + + LR + +R P LV + Q L L P AR L R L+ K + A E V+DLSRT DP +EHYG+ I
Sbjct: 931 PRLTAAAVASASYVVARGCRLIRRRSKGTGNSRGTLLRAAVASTQAAESTRDQD-KVVLLGDSVLDNFYWLEDPKQHLRVQLEEELRASRNQKIKALACVNLAVDQMTTFDFIERKTTQNPWEPYAAARKLVGFEDPQDEEYVVGKDGSIRSVKNLKRLKAVRWAVLSLGGNDVYLNSQVQTSLLTSLLPPFKQKRVEVAEAFGQRLRKAVAELRKA-APEAALVLVIPYQPHKDFSLLLGAPINADGERIAGDFTGDIARNLERQNLSDLVTPMIKEILATAREVGCAVVDLSRTLDPECEEHYGTGEI 1238
BLAST of mRNA_H-paniculata_contig4318.11021.1 vs. uniprot
Match: X6P0L7_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6P0L7_RETFI) HSP 1 Score: 69.3 bits (168), Expect = 3.510e-10 Identity = 35/87 (40.23%), Postives = 57/87 (65.52%), Query Frame = 2
Query: 305 VALVGDSVLDDHYWLRQPTEDVREQTERTLRQTYPSRSVEVLNFAVDESTVSCVIEGRAPDSRYRDGRKKAGMEPYPVDNDGVVRPL 565
+ L+GDSVLD+ +WL + D+ E+ L +T+ ++ ++LN AVDEST+ V++GR P +Y +GRK+ ++ YP + G V PL
Sbjct: 37 LVLMGDSVLDNFFWLDDKSTDL----EKVLDKTFEEKA-DILNLAVDESTIKSVLKGRKPAIQYVNGRKENKLKAYPTQSSGKVEPL 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4318.11021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4318.11021.1 >prot_H-paniculata_contig4318.11021.1 ID=prot_H-paniculata_contig4318.11021.1|Name=mRNA_H-paniculata_contig4318.11021.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=301bp METAPSSDLKVALVGDSVLDDHYWLRQPTEDVREQTERTLRQTYPSRSVEback to top mRNA from alignment at H-paniculata_contig4318:2116..9587- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4318.11021.1 ID=mRNA_H-paniculata_contig4318.11021.1|Name=mRNA_H-paniculata_contig4318.11021.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7472bp|location=Sequence derived from alignment at H-paniculata_contig4318:2116..9587- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4318:2116..9587- >mRNA_H-paniculata_contig4318.11021.1 ID=mRNA_H-paniculata_contig4318.11021.1|Name=mRNA_H-paniculata_contig4318.11021.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1806bp|location=Sequence derived from alignment at H-paniculata_contig4318:2116..9587- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |