prot_H-paniculata_contig4306.10995.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4306.10995.1
Unique Nameprot_H-paniculata_contig4306.10995.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length301
Homology
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BLAST of mRNA_H-paniculata_contig4306.10995.1 vs. uniprot
Match: D7FHD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD0_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.200e-60
Identity = 112/254 (44.09%), Postives = 154/254 (60.63%), Query Frame = 0 
Query:   47 ASLERCAPRFQQWRYLSAVRGRQLCANILRPEIVQVN----------DESWFVAVHVDRAPTVALTTRPRAGNLRGDRDRRPRQQVATHRELPHQYFVKVVEATMNAISSVEPGASVDVVVFSEGRWGEMVDEQGVPIDWDIGSEICEELGLQCSQELVLLNSHRRTNELPRSVVPEALECIGGADVFISSEDEFSRAAAALSHNVKVLTDQWEEDADEDEQMTPLDVATTIAGMKNAELDQLKRVVGEWRECS 290
            A   RCA R ++ R L     R+ CA +L    +  +           ESW V+VHVDRAP+              D  +R R     HR LPHQY+V+ +EA++++I+  EPGA VDV +FSEG+WG MVDE G+P+ WD+  E C++LGL CSQ +VLLN        P S   ++LECI  +D+FI+SE +FSRA A LS +VKVLTD+WE   DE+E M  L+ ATTIAGM +++   L+ +V ++ ECS
Sbjct:   36 AQQNRCAERIERRRGLGVPPDREQCAGVLPDSFMMQHGGGGGEDGRDSESWLVSVHVDRAPSSV------------DLSKRLRGAAPLHRSLPHQYYVRAMEASLHSIAVAEPGAHVDVAIFSEGQWGGMVDEMGLPLYWDVAGETCDDLGLHCSQHVVLLNERTA----PES--SQSLECIAASDLFIASESKFSRAGAVLSDHVKVLTDRWE--MDEEEMMVALNPATTIAGMPDSQRQLLRTLVADYHECS 269
[Close]
BLAST of mRNA_H-paniculata_contig4306.10995.1 vs. uniprot
Match: A0A6H5L6Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y9_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 4.630e-59
Identity = 111/254 (43.70%), Postives = 155/254 (61.02%), Query Frame = 0 
Query:   47 ASLERCAPRFQQWRYLSAVRGRQLCANILRPEIVQVN----------DESWFVAVHVDRAPTVALTTRPRAGNLRGDRDRRPRQQVATHRELPHQYFVKVVEATMNAISSVEPGASVDVVVFSEGRWGEMVDEQGVPIDWDIGSEICEELGLQCSQELVLLNSHRRTNELPRSVVPEALECIGGADVFISSEDEFSRAAAALSHNVKVLTDQWEEDADEDEQMTPLDVATTIAGMKNAELDQLKRVVGEWRECS 290
            A   RCA R ++ R L     R+ CA +L    +  +           ESW V+VHVDRAP+              D  +R R  V  HR LPHQY+V+ +EA++++I+  EPGA VDV +FSEG+WG MVDE G+P+ WD+  E C++LGL C+Q +VLLN        P S   ++L+CI  +D+FI+SE +FSRA A LS +VKVLTD+WE   DE+E M  L+ ATTIAGM +++   L+ +V ++ ECS
Sbjct:  141 AQQNRCAERIERRRGLGVPPDREQCAGVLPDSFMMQHGGGGAEDGRDSESWLVSVHVDRAPSSV------------DLSKRLRGAVPLHRSLPHQYYVRAMEASLHSIAVAEPGAHVDVAIFSEGQWGGMVDEMGLPLYWDVAGETCDDLGLHCTQHVVLLNERTA----PES--SQSLDCIAASDLFIASESKFSRAGAVLSDHVKVLTDRWE--MDEEEMMVALNPATTIAGMPDSQRQLLRTLVADYHECS 374
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4306.10995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHD0_ECTSI1.200e-6044.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6Y9_9PHAE4.630e-5943.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..300
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4306contigH-paniculata_contig4306:1749..3339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4306.10995.1mRNA_H-paniculata_contig4306.10995.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4306 1082..3481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4306.10995.1 ID=prot_H-paniculata_contig4306.10995.1|Name=mRNA_H-paniculata_contig4306.10995.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=301bp
MSSRQVSSRNSSSYAARPHNININVRLLAVGIAAGAIALFATPTTAASLE
RCAPRFQQWRYLSAVRGRQLCANILRPEIVQVNDESWFVAVHVDRAPTVA
LTTRPRAGNLRGDRDRRPRQQVATHRELPHQYFVKVVEATMNAISSVEPG
ASVDVVVFSEGRWGEMVDEQGVPIDWDIGSEICEELGLQCSQELVLLNSH
RRTNELPRSVVPEALECIGGADVFISSEDEFSRAAAALSHNVKVLTDQWE
EDADEDEQMTPLDVATTIAGMKNAELDQLKRVVGEWRECSLQAKYTRFRA
*
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