prot_H-paniculata_contig4304.10991.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4304.10991.1
Unique Nameprot_H-paniculata_contig4304.10991.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length326
Homology
BLAST of mRNA_H-paniculata_contig4304.10991.1 vs. uniprot
Match: A0A6H5K3M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M3_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.690e-38
Identity = 129/328 (39.33%), Postives = 171/328 (52.13%), Query Frame = 0
Query:    1 MDAQALMRINAQEENMFPVEIKVKMLMEQAGMRMRASRMVGERISQLDDVIRVRALLGIVGQ------NRRKAEKDNSGTERK------QQTTDASKTRAAAACAPSPRAR---DRFAPCGEADLAVFSRMAVSSMKTVLFQLAEEGMV----DGAKDLSVMYDGLVTTAALNADASEGFCALDVDSLLSAEHSTYRKLIVSRHRYLVRKLGVLLDMQEGVDKLLVLSVETEDEMMMEEMTDVSLQQ----QEEEDPSNKVKSQKS------------PQELARLLATGDGA-STAKKSILTSLLNTSWDSGTKLGGPGSDVATEDET 292
            +D+++L+RINA EE   PVE+KV  L  QA MR RAS MVG RISQLDD IRVRALL I+        +  + E   SG          Q    AS+    +   P+ +     D   P    DL VF+RMAV+ +K VLFQLA    V       KD+  +Y+GL+T+ AL   A EGF  LDV +L+   H  YR L+ +RHRYL+RKLGVLLDM++ VD LL  + +TE +M    + DV L       EE     +  SQ+             P   A   A G G   TAKK++     +TSWD   + G   ++  T++ET
Sbjct:   86 LDSRSLLRINAHEEFFLPVEVKVGWLSRQASMRSRASAMVGSRISQLDDAIRVRALLSILQSFNATTASVARPETPPSGAGASSAAKIAQDDCPASEGEEVSRSGPTGKGHVRTDSGPPPDPQDLEVFARMAVAKIKVVLFQLASPAEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPTLDVGTLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDCVDSLLEKAADTE-KMDPSSLADVDLSAGEDVHEEGAADARALSQEGASNHSAASALVLPSNAAPAAAVGGGTLKTAKKAVARLRRSTSWDKDEEGGEATTEGETDEET 412          
BLAST of mRNA_H-paniculata_contig4304.10991.1 vs. uniprot
Match: D8LJG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG2_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.290e-26
Identity = 90/218 (41.28%), Postives = 116/218 (53.21%), Query Frame = 0
Query:   32 MRMRASRMVGERISQLDDVIRVRALLGIVGQNRRKAEKDNSGTERK----------------QQTTDASKTRAAAACAPSPRAR---DRFAPCGEADLAVFSRMAVSSMKTVLFQLAEEGMV----DGAKDLSVMYDGLVTTAALNADASEGFCALDVDSLLSAEHSTYRKLIVSRHRYLVRKLGVLLDMQEGVDKLLVLSVETEDEMMMEEMTDVSL 226
            MR RAS MVG RISQLDD IRVRALL I+  +                              Q++  AS     +   P  +     D   P    DL VF+RMAV+ +K VLFQLA    V       KD+  +Y+GL+T+ AL   A EGF  LDV++L+   H  YR L+ +RHRYL+RKLGVLLDM++GVD LL  + +TE +M    + DV L
Sbjct:    1 MRSRASAMVGSRISQLDDAIRVRALLSILQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAQESCSASGGEEGSGSRPKGKRHVRTDSGPPPDLQDLEVFARMAVAKIKVVLFQLASPVEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPTLDVETLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDGVDSLLEKAADTE-KMDPSSLADVDL 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4304.10991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3M3_9PHAE1.690e-3839.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG2_ECTSI1.290e-2641.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4304contigH-paniculata_contig4304:3030..12968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4304.10991.1mRNA_H-paniculata_contig4304.10991.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4304 1780..14679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4304.10991.1 ID=prot_H-paniculata_contig4304.10991.1|Name=mRNA_H-paniculata_contig4304.10991.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MDAQALMRINAQEENMFPVEIKVKMLMEQAGMRMRASRMVGERISQLDDV
IRVRALLGIVGQNRRKAEKDNSGTERKQQTTDASKTRAAAACAPSPRARD
RFAPCGEADLAVFSRMAVSSMKTVLFQLAEEGMVDGAKDLSVMYDGLVTT
AALNADASEGFCALDVDSLLSAEHSTYRKLIVSRHRYLVRKLGVLLDMQE
GVDKLLVLSVETEDEMMMEEMTDVSLQQQEEEDPSNKVKSQKSPQELARL
LATGDGASTAKKSILTSLLNTSWDSGTKLGGPGSDVATEDETSDETDEET
PQNARRKGTAESPQNGHSVEVSPAH*
back to top