prot_H-paniculata_contig4289.10962.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4289.10962.1
Unique Nameprot_H-paniculata_contig4289.10962.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length314
Homology
BLAST of mRNA_H-paniculata_contig4289.10962.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 2.540e-53
Identity = 123/340 (36.18%), Postives = 176/340 (51.76%), Query Frame = 0
Query:    5 RRVAVQERGEPKSGTGFMFEWAGGMLVHACEYLKHIFGDSSCII---GNTLSTDDKN--------DLKYMSLSFTPNTTEA-------STDRCPCDELNSVYIEINSGGKHRLPFGKSNCTLSHGGGVARPGSSACLFFDGTRPANFTDLWHCIQEAVPKCSVQDNRRQMVIMRNPLAVAVSHYYYLLTPSQP----PSDVAGKPRLLEEYVSRMLPTVCQWVALRYILFAGILSDQSTIFWYDEAKANPLAWHNNWLDFIGLHLPPYVV------EVRVNHGDTFHTKGVDQHLG----MPSRSYKDEFSAEVLTRFESTLQLWLPPVLLARFGVPSLP 312
            + V +Q RGEPKSGT FMFEWA   L+  CE L  ++G+ +C     G       K         D+K +   F PN           S   CPC  ++ V I ++S  KH LP   S C   H   V  P +  C   +G R  N+TD   C+Q+    C + D+R QM+I+R+P AVAVS +++L T   P     +D +     ++ +V RMLPT+C ++ LRY++    L  ++  F YDE+ A+PL WH  WL  +GL  PP VV       +R  +G  F  KGVD+H G       R+++DE S +V  + E   + WLPPVLL +FG+ + P
Sbjct:   98 QHVELQLRGEPKSGTSFMFEWAVNALMVTCEELGRLYGEGTCTFRWRGFFSRRKQKPVSPETALVDMKEVFFVFKPNRQHGRSSAGGPSASPCPCSTVDKVSIMVSSLFKHDLPVPPS-CPWQHVDNVT-PENKGCTTVNGRRVGNYTDTVECLQQH--PCRIVDDRIQMLILRDPRAVAVSSFFHLKTHHHPFWKHLTDES-----VDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLRREYG--FAGKGVDKHPGGKEATEKRTWEDEISHDVAEQLEGICREWLPPVLLEKFGIGAPP 426          
BLAST of mRNA_H-paniculata_contig4289.10962.1 vs. uniprot
Match: A0A6H5KDV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV7_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 7.850e-39
Identity = 84/230 (36.52%), Postives = 123/230 (53.48%), Query Frame = 0
Query:   84 LNSVYIEINSGGKHRLPFGKSNCTLSHGGGVARPGSSACLFFDGTRPANFTDLWHCIQEAVPKCSVQDNRRQMVIMRNPLAVAVSHYYYLLTPSQPPSDVAGKPRLLEEYVSRMLPTVCQWVALRYILFAGILSDQSTIFWYDEAKANPLAWHNNWLDFIGLHLPPYVVEVRVNHGDTFHTKGVDQHLG----MPSRSYKDEFSAEVLTRFESTLQLWLPPVLLARFGVP 309
            L  V I I++  KHRLP  +S C  SHG G    G   C  FDG       DLW C+Q+    C + DNR Q V +R+P AVAVS Y++ +        +      L++ V  +LP +C +  LR+ILF G+LS+++ +FWY++   +P  WH  W  F GL LP   ++  V        K ++ H G      +R+++DE S  +    +S L+ WLP VLLAR+G+P
Sbjct:    2 LRRVEISISTVDKHRLPVNES-CPWSHGSGTVHEGDG-CWSFDGHPVETGADLWACMQKT--PCEITDNRLQFVPIRDPRAVAVSTYFHRVHKDNNYQKLHPS---LDQTVLEILPVLCHFTTLRHILFGGLLSNRTELFWYEQTVEDPFDWHYRWASFAGLILPGGWIDGMVAENQAH--KHLNPHPGGAETSDNRTWQDEVSPGIRPEMDSILRKWLPGVLLARYGIP 222          
BLAST of mRNA_H-paniculata_contig4289.10962.1 vs. uniprot
Match: A0A6H5JP89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP89_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.150e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 0
Query:  190 LEEYVSRMLPTVCQWVALRYILFAGILSDQSTIFWYDEAKANPLAWHNNWLDFIGLHLPPYVV------EVRVNHGDTFHTKGVDQHLG----MPSRSYKDEFSAEVLTRFESTLQLWLPPVLLARFGVPSLP 312
            ++ +V RMLPT+C ++ LRY++    L  ++  F YDE+ A+PL WH  WL  +GL  PP VV       +R  +G  F  KGVD+H G       R+++DE S EV  + E   + WLPPVLL +FG+ + P
Sbjct:   29 VDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPAVVLQATNTSLRREYG--FVGKGVDKHPGGKEATEKRTWEDEISREVAEQLEDICREWLPPVLLEKFGIGAPP 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4289.10962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJE4_ECTSI2.540e-5336.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDV7_9PHAE7.850e-3936.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP89_9PHAE1.150e-2240.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 13..299
e-value: 1.9E-7
score: 32.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 122..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4289contigH-paniculata_contig4289:9230..14086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4289.10962.1mRNA_H-paniculata_contig4289.10962.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4289 9230..14086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4289.10962.1 ID=prot_H-paniculata_contig4289.10962.1|Name=mRNA_H-paniculata_contig4289.10962.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp
GKYVRRVAVQERGEPKSGTGFMFEWAGGMLVHACEYLKHIFGDSSCIIGN
TLSTDDKNDLKYMSLSFTPNTTEASTDRCPCDELNSVYIEINSGGKHRLP
FGKSNCTLSHGGGVARPGSSACLFFDGTRPANFTDLWHCIQEAVPKCSVQ
DNRRQMVIMRNPLAVAVSHYYYLLTPSQPPSDVAGKPRLLEEYVSRMLPT
VCQWVALRYILFAGILSDQSTIFWYDEAKANPLAWHNNWLDFIGLHLPPY
VVEVRVNHGDTFHTKGVDQHLGMPSRSYKDEFSAEVLTRFESTLQLWLPP
VLLARFGVPSLPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase