mRNA_H-paniculata_contig4270.10921.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI) HSP 1 Score: 147 bits (370), Expect = 6.040e-38 Identity = 86/181 (47.51%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAY---PDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
+VDDLFL+T EF YDG+ NE R +G D ++ VQ ALN QY G I TE++FNGAGI E V+ P YEET+VT KGTK + VP+M+ + G W+ DDLL VL+Y P YHG H+L HLSRD+L+ESDC ED N QIA++TGM+D D
Sbjct: 328 VVDDLFLSTPEFEYDGEMNEAALSQRCTGEDLTNLLRVQEALNTQYSGSDIITEFAFNGAGIAEHVSQSVDGITYVPNYEETMVTIKGTKWYEDGQVNVHDTNWLATNVPLMQQDMADGTWEANDDLLAGVLSYLYKPSSFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSD 508
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.040e-36 Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAYPDEV---YHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
+VDDLFL+T EF Y+G+ NE R +G D ++ VQ ALN QY G I TE++FNG GI E V+ P YEET+VT KGTK + VP+M+ + G W+ D+LL AV++Y D YHG H+L HLSRD+L+ESDC ED N QIA++TGM+D D
Sbjct: 528 VVDDLFLSTPEFEYNGEMNEAAVAQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQSVDGITYVPEYEETMVTTKGTKWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLAAVISYLDTASTFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSD 708
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5JQ44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ44_9PHAE) HSP 1 Score: 140 bits (354), Expect = 6.970e-36 Identity = 82/181 (45.30%), Postives = 107/181 (59.12%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAY---PDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
+VDDLFL+T EF YDG +NE R +G D ++ VQ +LN QY G I TE++FNG GI E V+ P YEET+VT KGTK + VP+M+ + G W+ DDLL V+++ P YHG H+L HLSRD+L+ESDC ED N QIA++TGM+D D
Sbjct: 393 VVDDLFLSTPEFEYDGGTNEAAVAQRCTGQDLSNLLGVQQSLNTQYSGSEIITEFAFNGGGIAEHVSQSVEDISYVPNYEETMVTLKGTKWFEDGQINVHDTNWLATNVPLMQQDMADGTWEANDDLLAEVISHLDTPSTFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSD 573
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7FLJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ1_ECTSI) HSP 1 Score: 136 bits (343), Expect = 2.670e-34 Identity = 81/181 (44.75%), Postives = 106/181 (58.56%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKV-----NSDCTPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAYPDE---VYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
+VDDLFL+T EF YDG NE R +G D ++ VQ +LN Y G I TE++FNG GI E V N P YEET+VT KGT+ + VP+M+ + G W+ D+LL AV++Y D YHG H+L HLSRD+L+E+DC ED N QIA++TGM+D D
Sbjct: 348 VVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLTNLLSVQQSLNALYAGSDIITEFAFNGGGIAEHVSQAVENITYVPDYEETMVTTKGTQWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTSSTFYHGHHTLIHLSRDQLRETDCVTEDSGNVQIALMTGMWDSD 528
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5K3S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S3_9PHAE) HSP 1 Score: 136 bits (342), Expect = 3.560e-34 Identity = 79/172 (45.93%), Postives = 98/172 (56.98%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGTGYRASGADFEGIIDVQNALNDQYGCSIKTEYSFNGAGILEKVNSDCTPPYEETIVT--EKGTK--------------MTVEVPIMETEFTSGMWDTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
MVDDLFL T F YDG +NEG R + +D +++LN QYG SI TE+ FNG GIL VNS + KG + + VP M EF +G W TD LL VLA D + SH+L+HL+RD+L ESDC+IEDG NAQIAV+TGMF+ D
Sbjct: 276 MVDDLFLATGVFEYDGDTNEGAEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILNVVNSAFVLDIANADIALLPKGQQVNGDGIDPQLPVGWLATAVPGMTAEFAAGSWSTDGLLGWVLANLDTFWWQSHTLSHLARDDLGESDCSIEDGGNAQIAVLTGMFNSD 447
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5JW45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW45_9PHAE) HSP 1 Score: 129 bits (325), Expect = 5.030e-32 Identity = 81/203 (39.90%), Postives = 106/203 (52.22%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKV-----NSDCTPPYEETIVTEKGTK------------------------------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAY---PDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
+VDDLFL+T EF YDG NE R +G D ++ VQ ALN QY G I TE++FNG GI E V N P YEET+VT KGT+ + VP+M+ + G W+ D+LL AV++Y +HG H+L HLSRD+L+E+DC ED N QIA++TGM+D D
Sbjct: 64 VVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQAVENITYVPEYEETMVTTKGTRWYEDGELIDFVLFLEGRSLDPSKTSTGQINVHDTNWLATNVPLMQQDMADGTWEANDELLAAVISYLGTSSTFFHGHHTLIHLSRDQLRETDCVTEDTGNVQIALMTGMWDSD 266
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.180e-30 Identity = 75/173 (43.35%), Postives = 99/173 (57.23%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDT-DDLLQAVLAY---PDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAV 444
+VDDLFL+T EF YDG NE R +G D ++ VQ ALN QY G I TE++FNG GI E V+ P YEET+VT KGTK + VP+M+ + G W+ D+LL AV++Y P +YHG H+L HLSRD+L+E+DC +D A + V
Sbjct: 631 VVDDLFLSTPEFEYDGDMNEAAVAQRCTGEDLTNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQAVDGITYVPDYEETMVTIKGTKWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTPSTIYHGHHTLIHLSRDQLRETDCVADDTAAQNLMV 803
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7G022_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G022_ECTSI) HSP 1 Score: 114 bits (284), Expect = 2.420e-26 Identity = 67/180 (37.22%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGTGYRASGADFEGIIDVQNALNDQYGCSIKTEYSFNGAGILEKVNSDCT----------------PPYEETIVTEKGTKMTVEVPI--------METEFTSGMWDTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
+VDDLFL+T ++YD S G R SGAD + + + A N +YG S+KTE++FNG G+L+KV S PP T + + + + M+ ++ +G++ +DDLL V A D + SH+LTHLSRD L ++DC+IEDG N ++ V+ GMFD D
Sbjct: 836 VVDDLFLSTGVWIYDPPSFFGPEERLSGADLQKFQNSEAAFNTEYGASVKTEHAFNGLGVLDKVGSTRRSWVGAAADMGLLPKGDPPNPSTGIPQISDPNWLSIQFNPAAGEQGMQDDYDAGLFSSDDLLARVQADLDAFFWQSHTLTHLSRDNLGKNDCDIEDGGNVRLGVMFGMFDND 1015
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: A0A6H5K730_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K730_9PHAE) HSP 1 Score: 106 bits (265), Expect = 8.210e-24 Identity = 74/182 (40.66%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGTGY-RASGADFEGIIDVQNALNDQYGCSIKTEYSFNGAGILEKVNSDCTPPYEET--IVTEKG---------------TKM------TVEVPIMETEFTSGMW-DTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMDT 471
MVDD FL T F+Y+G SN R SG + + ALN+ Y I TE+ FN GILEK + T +E+ + KG TK TV + + EF S W + DDLLQA L D+ + SH+L+H +RD L + DC EDG NAQIAVITG+FD+DT
Sbjct: 283 MVDDHFLGTNTFVYNGGSNASDEEERISGEELRDFLSATKALNELYNAEIITEFPFNALGILEKAETKYTFTFEDADAALLAKGEPPVDNGDGTVGLAPTKTPEDWFNTVTMEGLTAEFDS--WKEKDDLLQASLDMKDDFFWHSHTLSHQARDNLGQVDCESEDGGNAQIAVITGLFDVDT 462
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI) HSP 1 Score: 104 bits (260), Expect = 3.970e-23 Identity = 69/177 (38.98%), Postives = 89/177 (50.28%), Query Frame = 1
Query: 1 MVDDLFLTTTEFLYDGQSNEGT-GYRASGADFEGIIDVQNALNDQY-GCSIKTEYSFNGAGILEKVNSDC-----TPPYEETIVTEKGTK--------------MTVEVPIMETEFTSGMWDTDDLLQAVLAYPDEVYHGSHSLTHLSRDELQESDCNIEDGANAQIAVITGMFDMD 468
+VDDLFL+T EF YDG NE R +G D ++ VQ ALN QY G I TE++FNG GI E V+ P YEET+VT KGTK + VP+M+ + G W+ +D L EL+E+DC ED N QIA++TGM+D D
Sbjct: 526 VVDDLFLSTPEFEYDGGMNEAAVSQRCTGDDLSQLLSVQQALNTQYSGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGQINVHDTNWLATNVPLMQQDMADGTWEANDDLLV---------------------ELRETDCVTEDTGNVQIALMTGMWDSD 681 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4270.10921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4270.10921.1 >prot_H-paniculata_contig4270.10921.1 ID=prot_H-paniculata_contig4270.10921.1|Name=mRNA_H-paniculata_contig4270.10921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp MVDDLFLTTTEFLYDGQSNEGTGYRASGADFEGIIDVQNALNDQYGCSIKback to top mRNA from alignment at H-paniculata_contig4270:5588..8645+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4270.10921.1 ID=mRNA_H-paniculata_contig4270.10921.1|Name=mRNA_H-paniculata_contig4270.10921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3058bp|location=Sequence derived from alignment at H-paniculata_contig4270:5588..8645+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4270:5588..8645+ >mRNA_H-paniculata_contig4270.10921.1 ID=mRNA_H-paniculata_contig4270.10921.1|Name=mRNA_H-paniculata_contig4270.10921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig4270:5588..8645+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |