prot_H-paniculata_contig4266.10908.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4266.10908.1
Unique Nameprot_H-paniculata_contig4266.10908.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length195
Homology
BLAST of mRNA_H-paniculata_contig4266.10908.1 vs. uniprot
Match: D7FRH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH2_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 6.150e-10
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   95 GLPDDLPVLSLSDSHFVNNSAWSEKDINIEDDYKLGSTWHWLHGGGALSLAHTKANVTGCNFSANEAQVSGGAVFSGNGTAPSFNNCSFFDNKTPGFG 192
            G+    P  SLSD+ F +N A +  ++++ D  +   TW  L+GGGA +       +T   F  N AQVSGG +F G+G++ S + C+  +N TPG+G
Sbjct:  221 GVESSDPSCSLSDAAFTSNEASTGAEVSLSDTVE---TWADLYGGGAAAFYLATVEITDSLFELNYAQVSGGGIFGGSGSSMSIDGCTINNNTTPGYG 315          
BLAST of mRNA_H-paniculata_contig4266.10908.1 vs. uniprot
Match: A0A6H5JB86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB86_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 5.960e-8
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  104 SLSDSHFVNNSAWSEKDINIEDDYKL-GSTWHWLHGGGALSLAHTKANVTGCNFSANEAQVSGGAVFSGNGTAPSFNNCSFFDNKTPGFGGAV 195
            SLS + F  N+A SE  +    DY L  S W  L+GGGA +      ++TG  F  N AQVSGGAV+ G+ +  + +  SF +N TPG+GG +
Sbjct:  245 SLSGAVFGANNASSETIV----DYDLIESPWVTLYGGGAAAFYRGVVDITGSEFLGNYAQVSGGAVYGGSDSVLTIDGSSFEENTTPGYGGGL 333          
BLAST of mRNA_H-paniculata_contig4266.10908.1 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.870e-7
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0
Query:  104 SLSDSHFVNNSAWSEKDINIEDDYKL-GSTWHWLHGGGALSLAHTKANVTGCNFSANEAQVSGGAVFSGNGTAPSFNNCSFFDNKTPGFGGAV 195
            SLS + F  N+A SE  +    DY L  + W  L+GGGA +      ++TG  F  N AQVSGGAV+ G  +  + +  SF +N TPG+GG +
Sbjct:  244 SLSGAVFGANNASSETIV----DYDLIEAPWVTLYGGGAAAFYRGVVDITGSEFLGNYAQVSGGAVYGGTDSVLTIDGSSFEENTTPGYGGGL 332          
BLAST of mRNA_H-paniculata_contig4266.10908.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.880e-7
Identity = 58/197 (29.44%), Postives = 82/197 (41.62%), Query Frame = 0
Query:    4 GGAILS-LGTLTLENCLVEDNQATSGSGGALRVEGGAVTVTGGEFLRNTATWNGGAISAVDATLTVEDEAKFEGNKAVRGGAIYFVGLSELPGLP-DDLPVLSLSDSHFVNNSAWSEKDINIEDDYKLGSTWH---WLHGGGALSLAHTKANVTGCNFSANEAQVSGGAVFSGNGTAPSFNNCSFFDNKTPGFGGAV 195
            GGAI S +  +TL +C  + N AT G GGA+ VEGG                                              ++  G      L   D    SL+   F  N+A SE  ++  D+    ST      L+GGG  +  HT  N+T   F +N AQ+SGGA+F G  +A + +  +  +N TPGF GA+
Sbjct:  125 GGAIRSSMAAVTLNSCAFDGNIATDGDGGAVWVEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLFCGGSENATLLSASDNASCSLNGVIFAFNNASSETILDY-DNMAAPSTQAPLITLYGGGGAAFYHTVVNITDSVFESNYAQLSGGALFGGTDSAMAIDGVTLENNFTPGFAGAL 320          
BLAST of mRNA_H-paniculata_contig4266.10908.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.880e-7
Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 0
Query:  104 SLSDSHFVNNSAWSEKDINIEDDYKLGSTWHWLHGGGALSLAHTKANVTGCNFSANEAQVSGGAVFSGNGTAPSFNNCSFFDNKTPGFGGAV 195
            SLS++ F+ N+A  E +I     +        + GGGA +  + + N++   F +N AQ+SGGAVF GN T  + N C F +N T G+G AV
Sbjct:  264 SLSEAVFIANNASRETEIQYPSYWVSTDE---VDGGGAAAFWYAEVNISDSVFGSNYAQLSGGAVFGGNSTEMAINGCKFENNTTLGYGAAV 352          
BLAST of mRNA_H-paniculata_contig4266.10908.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.310e-6
Identity = 32/92 (34.78%), Postives = 50/92 (54.35%), Query Frame = 0
Query:   95 GLPDDLPVLSLSDSHFVNNSAWSEKDINIEDDYKLGSTWHWLHGGGALSLAHTKANVTGCNFSANEAQVSGGAVFSGNGTAPSFNNCSFFDN 186
            G+    P  SLSD+ F +N A +  +++  D  +   TW  L+GGGA +       +T   F  N AQVSGG +F G+G++ S + C+  +N
Sbjct:  221 GVESSAPSCSLSDATFTSNVATTGAEVSFSDTIE---TWADLYGGGAAAFYLAAVEITNSLFELNYAQVSGGGIFGGSGSSMSIDGCTINNN 309          
BLAST of mRNA_H-paniculata_contig4266.10908.1 vs. uniprot
Match: A0A2P6N431_9EUKA (Putative LRR receptor-like serine/threonine-protein kinase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N431_9EUKA)

HSP 1 Score: 53.1 bits (126), Expect = 9.200e-5
Identity = 50/168 (29.76%), Postives = 76/168 (45.24%), Query Frame = 0
Query:   11 GTLTLENCLVEDNQATSGSGGALRVEGGA-VTVTGGEFLRNTATWNGGAISAVDATLTVEDEAKFEGNKAVRGGAIYFVGLSELPGLPDDLPVLSLSDSHFVNNSAWSEKDINIEDDYKLGSTWHWLHGGGALSLAHTKA------NVTGCNFSANEAQVSGGAVFSG 171
            GT++ ++     N A+ G  GAL V G   +++  G F+ N AT  GG  S    TLTV + A FEGN+A +GGAI+    S    +       ++S + F +NSA             +G     L G  ++ L   K       ++   +F  N+A+V G   F G
Sbjct: 1940 GTVSCQSSNFTFNNASDG--GALHVNGSMDISIFQGAFMYNVATRGGGLYSRAINTLTVNNGANFEGNRATQGGAIFSSTFSSHRSI-------TISTAFFDSNSA------------DIGGALLLLSGDHSIILPSKKRQSEYIMSLNRVSFKKNQARVGGALCFYG 2086          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4266.10908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FRH2_ECTSI6.150e-1036.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB86_9PHAE5.960e-841.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG6_ECTSI2.870e-740.86Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH4_ECTSI2.880e-729.44Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FRH0_ECTSI2.880e-738.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JS31_9PHAE1.310e-634.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6N431_9EUKA9.200e-529.76Putative LRR receptor-like serine/threonine-protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 47..67
e-value: 0.0013
score: 16.5
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 74..86
e-value: 0.14
score: 12.7
NoneNo IPR availablePANTHERPTHR11319G PROTEIN-COUPLED RECEPTOR-RELATEDcoord: 11..121
coord: 103..193
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 2..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4266contigH-paniculata_contig4266:3558..4142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4266.10908.1mRNA_H-paniculata_contig4266.10908.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4266 3558..4142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4266.10908.1 ID=prot_H-paniculata_contig4266.10908.1|Name=mRNA_H-paniculata_contig4266.10908.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
DTDGGAILSLGTLTLENCLVEDNQATSGSGGALRVEGGAVTVTGGEFLRN
TATWNGGAISAVDATLTVEDEAKFEGNKAVRGGAIYFVGLSELPGLPDDL
PVLSLSDSHFVNNSAWSEKDINIEDDYKLGSTWHWLHGGGALSLAHTKAN
VTGCNFSANEAQVSGGAVFSGNGTAPSFNNCSFFDNKTPGFGGAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence