mRNA_H-paniculata_contig4250.10859.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4250.10859.1
Unique NamemRNA_H-paniculata_contig4250.10859.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: D7FI94_ECTSI (Intrafragellar transpot 52, osm-6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI94_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 5.190e-45
Identity = 106/152 (69.74%), Postives = 110/152 (72.37%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGA------ADDAGAVSANEGG-GGLTFVYPYGATMTVQSP 435
            +L SGGSA FLLGEGGE+RLGTNVNYLLEEYGMTVHKDSVAR TYHKYMHPKEAFISHGILNPEI RMKD ASLSRRG     XXXXXXXXXX                            DDAGAV + + G GGLTFVYPYGATMTVQSP
Sbjct:   81 YLRSGGSAVFLLGEGGEERLGTNVNYLLEEYGMTVHKDSVARATYHKYMHPKEAFISHGILNPEIARMKDAASLSRRGGHSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDAGAVPSGDAGHGGLTFVYPYGATMTVQSP 232          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A836CAI6_9STRA (Intrafragellar transport 52, osm-6-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.170e-31
Identity = 69/145 (47.59%), Postives = 87/145 (60.00%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 435
            +LN GGS A LL EGGE  LGTNVNYLLEE+G+ VH DSV RT ++KY+HPKE F+SHG+LNPE+ RMK+  ++  +G                             R +S G + D  A     GGG L FVYPYGA++TVQ+P
Sbjct:   71 YLNGGGSVAVLLAEGGEGHLGTNVNYLLEEFGVAVHADSVVRTAFYKYLHPKEVFVSHGVLNPELARMKNRCAVGTKG-----------------------------RTRSAGQSRDLDADDVANGGG-LAFVYPYGASLTVQAP 185          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A7S3XU22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU22_HETAK)

HSP 1 Score: 113 bits (283), Expect = 1.450e-29
Identity = 66/140 (47.14%), Postives = 83/140 (59.29%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATM 420
            +LN GGS A  LGEGGE + GTN+NYLLE++GMT+H DSV RTTY+KY+HPKE FIS+GILNPEI + K T   + R                  L                GAA +   V  ++GGG L+FV+PYGA+M
Sbjct:   15 YLNQGGSVAIFLGEGGEAKSGTNINYLLEQFGMTIHSDSVVRTTYYKYLHPKEVFISNGILNPEIAKKKHTMGAAGRKLGAFARKVAIGQQGLAGL---------------VGAAHEQ--VDTSDGGG-LSFVFPYGASM 136          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A7S2WK73_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WK73_9STRA)

HSP 1 Score: 103 bits (258), Expect = 8.070e-25
Identity = 63/145 (43.45%), Postives = 83/145 (57.24%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 435
            +L+ GGS  FLLGEGGE++ GTN+N+LLEEYG++ + DSVART Y+KY+HPKE  I +GILN  +V      S  ++G                        P+ ++  K    A  AGA   N   GGL FVYPYG+T+ VQ P
Sbjct:   83 YLHDGGSILFLLGEGGEEKYGTNINFLLEEYGISFNNDSVARTVYYKYLHPKEVLIGNGILNRGVVTSSRHISGGKKGDLKGQDKRKK--------------PAILANKK----AVAAGATKEN---GGLDFVYPYGSTLNVQKP 206          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A812XMP2_9DINO (IFT52 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XMP2_9DINO)

HSP 1 Score: 95.1 bits (235), Expect = 1.640e-21
Identity = 56/145 (38.62%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 435
            +L  GGS  FL+GEGGE +  TNVNYLLEE+GM+++ D+V RT YHKY HPKE  I+HG +  ++VR  +      +                 +L  +I+              +DA  V+  +  GGL FV+PYGAT+  Q P
Sbjct:   70 YLADGGSILFLVGEGGEGKSNTNVNYLLEEFGMSINNDAVVRTVYHKYHHPKECLITHGTICRDLVRAANGEKKKEKENND-------------KLALNITK-------------EDAETVTLAKDDGGLEFVFPYGATLNAQKP 188          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A812JBT7_SYMPI (IFT52 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812JBT7_SYMPI)

HSP 1 Score: 95.9 bits (237), Expect = 5.480e-21
Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 435
            +L  GGS  FL+GEGGE +  TNVNYLLEE+GM+V+ D+V RT YHKY HPKE  I+HG +  ++VR  +      +                 +L  +I+              +DA  V+  +  GGL FV+PYGAT+  Q P
Sbjct:   70 YLADGGSVLFLVGEGGEGKSNTNVNYLLEEFGMSVNNDAVVRTVYHKYHHPKECLITHGTICRDLVRAANGEKKKEKENND-------------KLALNITK-------------EDAETVTLAKDDGGLEFVFPYGATLNAQKP 188          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A1Y2BQ39_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BQ39_9FUNG)

HSP 1 Score: 96.3 bits (238), Expect = 6.370e-21
Identity = 62/145 (42.76%), Postives = 73/145 (50.34%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 435
            FL  GGS  +L GEGGE    TN NYLLEEYGM V+ D V RT ++KY HPKE F+S+GILN EI R     +                             P + S  K  G     G    ++   GLTFVYPYGAT+TVQ P
Sbjct:   30 FLERGGSILYLSGEGGESEYNTNFNYLLEEYGMVVNPDCVTRTVFYKYFHPKEVFVSNGILNREINRAAGKKA-----------------------------PLTASA-KQGGIVGGGGDHHDHKNHTGLTFVYPYGATLTVQKP 144          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A812SV39_9DINO (Ift52 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SV39_9DINO)

HSP 1 Score: 96.7 bits (239), Expect = 1.130e-20
Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 435
            +L  GGS  FL+GEGGE +  TNVNYLLEE+GM+V+ D+V RT YHKY HPKE  I+HG +  ++VR  +      +                 +L  +I+              +DA  V+  +  GGL FV+PYGAT+  Q P
Sbjct:   87 YLADGGSVLFLVGEGGEGKSNTNVNYLLEEFGMSVNNDAVVRTVYHKYHHPKECLITHGTICRDLVRSANGEKKKEKENND-------------KLALNITK-------------EDAETVTLTKDDGGLEFVFPYGATLNAQKP 205          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A507EUJ0_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507EUJ0_9FUNG)

HSP 1 Score: 95.1 bits (235), Expect = 5.320e-20
Identity = 59/145 (40.69%), Postives = 73/145 (50.34%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 435
            FL  GGS  +L GEGGE    TN NYLLEEYGM V+ DSV RT ++KY HPKE F+S+GILN EI R    A+  +                 G+ D                          ++   GL+FVYPYGA++TVQ P
Sbjct:  203 FLEKGGSILYLAGEGGESEYNTNFNYLLEEYGMMVNSDSVTRTVFYKYFHPKEVFVSNGILNREINR----AAGKKANVPASNRPGGMIGGDLGQHD--------------------------HKNHTGLSFVYPYGASLTVQKP 317          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: F0Y809_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y809_AURAN)

HSP 1 Score: 94.7 bits (234), Expect = 5.770e-20
Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 1
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 435
            F+ +GGS   L  EGGE +LG NVN LLE YGM+   DSV RT Y+KY+HPKE F+SHG+L PE+   K  +  + R                              RG    A +  G   A +GGG L+FVYP GAT++VQ P
Sbjct:   72 FVANGGSLLVLSSEGGEPKLGCNVNELLEGYGMSAQPDSVLRTVYYKYLHPKEVFVSHGVLQPELATHKHLSHGNARKHR---------------------------RGGVAAAKEPEGGHDAAQGGG-LSFVYPRGATLSVQRP 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI94_ECTSI5.190e-4569.74Intrafragellar transpot 52, osm-6-like protein n=1... [more]
A0A836CAI6_9STRA8.170e-3147.59Intrafragellar transport 52, osm-6-like protein (F... [more]
A0A7S3XU22_HETAK1.450e-2947.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2WK73_9STRA8.070e-2543.45Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A812XMP2_9DINO1.640e-2138.62IFT52 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A812JBT7_SYMPI5.480e-2139.31IFT52 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A1Y2BQ39_9FUNG6.370e-2142.76Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
A0A812SV39_9DINO1.130e-2039.31Ift52 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A507EUJ0_9FUNG5.320e-2040.69Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
F0Y809_AURAN5.770e-2041.38Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4250contigH-paniculata_contig4250:2499..3925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.8
Seed ortholog evalue7.6e-39
Seed eggNOG ortholog2880.D7FI94
Preferred nameIFT52
KEGG koko:K19681
Hectar predicted targeting categoryother localisation
GOsGO:0001838,GO:0001841,GO:0001947,GO:0002009,GO:0003002,GO:0003007,GO:0003008,GO:0003143,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005856,GO:0005871,GO:0005875,GO:0005929,GO:0006810,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007507,GO:0007600,GO:0008022,GO:0008150,GO:0008285,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009953,GO:0009987,GO:0010468,GO:0010970,GO:0015630,GO:0016043,GO:0016331,GO:0019222,GO:0021915,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030162,GO:0030326,GO:0030425,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032391,GO:0032501,GO:0032502,GO:0032991,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035148,GO:0035239,GO:0035295,GO:0035720,GO:0035735,GO:0035869,GO:0036064,GO:0036477,GO:0040011,GO:0042073,GO:0042127,GO:0042221,GO:0042330,GO:0042733,GO:0042995,GO:0043005,GO:0043009,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044292,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044782,GO:0046907,GO:0048513,GO:0048519,GO:0048523,GO:0048562,GO:0048568,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048736,GO:0048856,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051171,GO:0051179,GO:0051234,GO:0051246,GO:0051641,GO:0051649,GO:0051716,GO:0060173,GO:0060255,GO:0060271,GO:0060429,GO:0060562,GO:0061371,GO:0065007,GO:0070613,GO:0070887,GO:0070925,GO:0071840,GO:0072175,GO:0072359,GO:0080090,GO:0097447,GO:0097458,GO:0097542,GO:0097546,GO:0097730,GO:0097731,GO:0097733,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902074,GO:1902075,GO:1903317,GO:1905515
EggNOG free text desc.intraciliary anterograde transport
EggNOG OGsKOG3861@1,KOG3861@2759
Ec32 ortholog descriptionIntraflagellar transport 52, Osm6-like protein
Ec32 orthologEc-23_003890.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons3
Model size435
Cds size435
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4250.10859.1prot_H-paniculata_contig4250.10859.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4250 2499..3925 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930291.9128726-CDS-H-paniculata_contig4250:2498..26181622930291.9128726-CDS-H-paniculata_contig4250:2498..2618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4250 2499..2618 +
1691481228.1284425-CDS-H-paniculata_contig4250:2498..26181691481228.1284425-CDS-H-paniculata_contig4250:2498..2618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4250 2499..2618 +
1622930291.9312978-CDS-H-paniculata_contig4250:3179..34351622930291.9312978-CDS-H-paniculata_contig4250:3179..3435Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4250 3180..3435 +
1691481228.1443515-CDS-H-paniculata_contig4250:3179..34351691481228.1443515-CDS-H-paniculata_contig4250:3179..3435Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4250 3180..3435 +
1622930291.9495015-CDS-H-paniculata_contig4250:3866..39251622930291.9495015-CDS-H-paniculata_contig4250:3866..3925Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4250 3867..3925 +
1691481228.1543279-CDS-H-paniculata_contig4250:3866..39251691481228.1543279-CDS-H-paniculata_contig4250:3866..3925Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4250 3867..3925 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4250.10859.1

>prot_H-paniculata_contig4250.10859.1 ID=prot_H-paniculata_contig4250.10859.1|Name=mRNA_H-paniculata_contig4250.10859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMH
PKEAFISHGILNPEIVRMKDTASLSRRGGGGNSASSSSSRPGGGRLDSSI
SSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP
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mRNA from alignment at H-paniculata_contig4250:2499..3925+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4250.10859.1 ID=mRNA_H-paniculata_contig4250.10859.1|Name=mRNA_H-paniculata_contig4250.10859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1427bp|location=Sequence derived from alignment at H-paniculata_contig4250:2499..3925+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTTTAAATAGTGGAGGTAGCGCGGCGTTTTTGCTCGGGGAGGGGGGAGA GGATCGGTTGGGCACGAATGTGAACTACCTGCTGGAGGAGTACGGGATGA CGGTGCACAAAGACAGCGTGGTGAGGGGACGGGTGACATGGTTGTGCGAC GATTGAGTGGGGTATAAGTGGGCCAACATTTTTCATCATCTTTCCAGGGA ATATACCCCGAGGCTCCTACTTCATAGCACCTCCTGTATGCGGCATCACA ACTTGTTCAACAGGCTGTGTGTACAGTAGGTGCTACACAGCCTTCCGCAA TAAATGAAAATTGTGTTGGGGACGCCCAAGTTACTGAGAAGTGATGTGAA TCAGTACCAGCCAGTGCGAACACGTTCAACAACGTGTACAACGACAGCTC ACTTTGGTAGAGCACCAAATCCAAGTTTGTACAAATACTGGTACAAACAT ACGAATGTACACACTGAATGGGCTTCAGTATCTGATCCAATACCTCAACA AACTCTTGTCTCACAGTGCTGTAAAGAGGATGGTACAAAAATGTCCCTTG GTGGGGGAGGGGGGTCGGGGGGACATACTGCAAGTGTCCCTTCTCCTCGA CTGAAATTTCCGCGCTGAATACCTTTACCCCGCTTCGCCTCGATCAATAC ACAATTTTTCCCCGCCCGACCGCTGCTGCAGGCACGCACTACTTACCATA AGTATATGCACCCCAAGGAAGCTTTCATTTCTCACGGAATTCTCAACCCT GAGATCGTCCGAATGAAGGACACGGCGTCGCTCTCGCGGCGCGGAGGCGG TGGAAATTCGGCATCATCTTCCAGTAGTAGGCCCGGCGGAGGCAGGCTCG ATTCCTCTATTTCTTCTCCTTCTTCTGTATCTAGAGGAAAGTCCAAGGGT GCTGCGGACGACGCGGGGGCGGTCTCCGCGAACGAAGGTGCGACAAGTAT CGTTATATAGTTACTGCCAAAATATTTTTTATATTTTACAAAACGATAAC GTGGAAGTGTTTATCTGTATATTTACTAAAAATACATGACTAAAAATGTC ATTATGTGTGCTCGCTGCCAATCAATCCCCAAAACACCACACCGACTACG CCTAGATGACTATAAAATTTAGTTGAGCCCCGGCAACTGTAAGGCCGGTG AGACGATACTTGCTCGTTAGTTAACTTGCAATTCTATTTCTGTCAGACGT TAGTTAACCAAATGGCGTAGTGCTTTGATTTTAATAATGCAATGAGATAT ACCCAAATATACACATTATCAGTTCCTGCTATCCTATTGTACTTCGTGTC TACATTCAAGCATCCTAGCCCCCCCACCCCCCCTCAACCACCCCCTGGTC GTTATTCAACCGAACCAGGCGGAGGCGGGCTAACTTTCGTATATCCGTAC GGGGCAACAATGACGGTCCAATCCCCG
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Coding sequence (CDS) from alignment at H-paniculata_contig4250:2499..3925+

>mRNA_H-paniculata_contig4250.10859.1 ID=mRNA_H-paniculata_contig4250.10859.1|Name=mRNA_H-paniculata_contig4250.10859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at H-paniculata_contig4250:2499..3925+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTTTAAATAGTGGAGGTAGCGCGGCGTTTTTGCTCGGGGAGGGGGGAGA
GGATCGGTTGGGCACGAATGTGAACTACCTGCTGGAGGAGTACGGGATGA
CGGTGCACAAAGACAGCGTGTTTTTAAATAGTGGAGGTAGCGCGGCGTTT
TTGCTCGGGGAGGGGGGAGAGGATCGGTTGGGCACGAATGTGAACTACCT
GCTGGAGGAGTACGGGATGACGGTGCACAAAGACAGCGTGGCACGCACTA
CTTACCATAAGTATATGCACCCCAAGGAAGCTTTCATTTCTCACGGAATT
CTCAACCCTGAGATCGTCCGAATGAAGGACACGGCGTCGCTCTCGCGGCG
CGGAGGCGGTGGAAATTCGGCATCATCTTCCAGTAGTAGGCCCGGCGGAG
GCAGGCTCGATTCCTCTATTTCTTCTCCTTCTTCTGTATCTAGAGGAAAG
TCCAAGGGTGCTGCGGACGACGCGGGGGCGGTCTCCGCGAACGAAGGCAC
GCACTACTTACCATAAGTATATGCACCCCAAGGAAGCTTTCATTTCTCAC
GGAATTCTCAACCCTGAGATCGTCCGAATGAAGGACACGGCGTCGCTCTC
GCGGCGCGGAGGCGGTGGAAATTCGGCATCATCTTCCAGTAGTAGGCCCG
GCGGAGGCAGGCTCGATTCCTCTATTTCTTCTCCTTCTTCTGTATCTAGA
GGAAAGTCCAAGGGTGCTGCGGACGACGCGGGGGCGGTCTCCGCGAACGA
AGGCGGAGGCGGGCTAACTTTCGTATATCCGTACGGGGCAACAATGACGG
TCCAATCCCCGGCGGAGGCGGGCTAACTTTCGTATATCCGTACGGGGCAA
CAATGACGGTCCAATCCCCG
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