prot_H-paniculata_contig4247.10850.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4247.10850.1
Unique Nameprot_H-paniculata_contig4247.10850.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length373
Homology
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 3.390e-75
Identity = 157/328 (47.87%), Postives = 202/328 (61.59%), Query Frame = 0
Query:   14 RQPYAIVLALQLFQKIANLKKKPSLTLVLMVAMSLLHVKSDLFQDFMSSSGRHSSGHLELGW-WNIGGWYHHDFVHSVCLLPNAMWDTYRRTGWFDFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLLLFSTFTSQALLLLAS-VVLMALGADGAMQSCTVGFSGVLFALKYVAQRRSPGVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIYLEFPIIALFLRFLVPTRVIPSMYRRPR---YTYTSGTASSGTARAPAAASSRTSKAPSPVKK----SSPSQAALAAEQEELEKAIRRSLENS 332
            R+P+A++LAL+L  +I+ L+ KP LTL LM  MS LH+K D+F+D     G          W W  GG+   D + +VCLLP ++ DTY RTG  + +R  +SP  H DDMHL YNM SFL KG+SLELTM  Q + GLL FS   SQ L++L++ V+L+       M +C VGFSGVLFALKYV  RRSPGVT VMGF + TRYATWLEL+LIS+  PNASFLGHL GIL G++Y+E PI+   +          S+Y   R   YTY SGT  SG A    A      ++P+P       S P      AE+  L++A+RRSL +S
Sbjct:   32 RRPWALILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRKG-------VFEWSWLTGGF---DHIRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGI----SLYNNRRGRSYTYNSGT--SGRASPEGARRETRQQSPNPPAAYDIDSDPE-----AEEAALQEALRRSLLDS 338          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: A0A0K8SJN0_LYGHE (Rhomboid domain-containing protein n=5 Tax=Mirini TaxID=236659 RepID=A0A0K8SJN0_LYGHE)

HSP 1 Score: 130 bits (328), Expect = 7.500e-32
Identity = 73/147 (49.66%), Postives = 94/147 (63.95%), Query Frame = 0
Query:  108 DFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLLLF-STFTSQALLLLASVVLMALGADGAMQSCTVGFSGVLFALKYVAQRRSP-GVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIYLEFPI 252
            D+K FFLS V HADDMHL YNMIS+L KG +LE      N+  LL F ST TS   + +A V    L    AM SC +GFSGV+FALK +    +P G T + GF++  +YA W EL+ I +  PNASF+GHL GIL G++Y + P+
Sbjct:   70 DYKSFFLSNVEHADDMHLYYNMISYLVKGRTLEYKYGSANFALLLAFLSTLTSFFYVAIAYVAAEFLENKHAMSSCAIGFSGVIFALKLLTTLENPVGHTYIQGFRVHVKYAAWAELVAIHVLVPNASFMGHLAGILAGLVYFKTPL 216          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.070e-31
Identity = 109/290 (37.59%), Postives = 145/290 (50.00%), Query Frame = 0
Query:   10 RRRERQPYAIVLALQLFQKIANLKKKPSLTLVLMVAMSLLHVKSDLFQDFMSSSGRHSSGHLELGWWNIGGWYHHDFVHSVCLLPNAMWDTYRRTGWFDFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLLLFSTFTSQALLLLASVVLMALGADGAMQSCTVGFSGVLFALKYVAQRRSPGVTEVMG-FKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIYLEF-PIIALFLRFLVPTRVI---PSMY-----RRPRYTYTSGTASSGTARA 289
            R+R   PYA  +AL L  +   L  KP  T  L+   + +H+        + +        L  G          D+   VCL P  +       G  D  R F S + H DD+HL YNM S L KG+SLE TM    +  L++F    S  L+++ ++  + LG D    SC VGFS VLFALKYVA  R P     +G F ID+R+A+W EL+LI +  PNASFLGHL GIL G++++    ++A   + L P  V    P  Y     R  RYTY  GT  SGTA A
Sbjct:    7 RQRTGNPYATGVALDLLNRFLQLPYKPPFTCFLIALNACIHLYPAALAGVLPAR-------LLFG----------DYT-KVCLKPAKVVKELLN-GEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPGFNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVAYTAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGT--SGTAAA 275          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: A0A7S2TY11_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA)

HSP 1 Score: 130 bits (327), Expect = 1.150e-31
Identity = 91/240 (37.92%), Postives = 124/240 (51.67%), Query Frame = 0
Query:    9 RRRRERQPYAIVLALQLFQKIANLKKKPSLTLVLMVAMSLLHVKSDLFQDFMSSSGRHSSGHLELGWWNIGGWYHHDFVHSVCLLPNAMWDTYRRTGWFDFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLLLFSTFTSQALLLLASVVLMALG-ADGAMQSCTVGFSGVLFALKYVAQRRSPGVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIY 247
            RRR +  P  ++L +QL ++IANL+ KP  TL LM   S +++         S   R                     V  VC+ P  +          D+KR  LS   HADD HL YNM S L KG+ LE     + ++G+ L     S +  + A+ ++  LG +  +MQ+C VGFS VLFA K V    SP +T V G  +  +YA WLEL++ISI  PNASFLGHL GIL G++Y
Sbjct:    8 RRRGQIDPRMMMLLMQLGRQIANLEYKPPATLALMALNSAVYLYE------FSLPFR---------------------VPDVCMHPAKI------LFGGDWKRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVY 214          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: UPI0006D4F5D8 (rhomboid-related protein 4-like isoform X1 n=2 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4F5D8)

HSP 1 Score: 129 bits (325), Expect = 1.900e-31
Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0
Query:   89 SVCLLPNAMWDTYRRTGWFDFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLL-LFSTFTSQALLLLASVVLMALGADGAMQSCTVGFSGVLFALKYVAQRR-SPGVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIY 247
             VC+  + +W+        DF+   LS + HADDMHL YNMIS+L KG SLE      N+  +L + S  TS   ++LA V  + LG +  M SC +GFSGV+FALK++     S G   + G ++ T+YATW+EL+ I I  PNASF+GH  G+L GI+Y
Sbjct:   58 DVCISGHKIWNKQ------DFRPLILSTIEHADDMHLYYNMISYLVKGRSLENKYGSSNFALILTIISLMTSGLYVILAVVGSILLGNNAIMSSCAIGFSGVIFALKFITTHEDSEGFRYIQGIRVPTKYATWVELIAIHILVPNASFMGHFAGVLAGILY 212          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: A0A067QXX6_ZOONE (Rhomboid domain-containing protein 1 n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QXX6_ZOONE)

HSP 1 Score: 126 bits (317), Expect = 1.170e-30
Identity = 77/175 (44.00%), Postives = 102/175 (58.29%), Query Frame = 0
Query:  108 DFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLLLF-STFTSQALLLLASVVLMALGADGAMQSCTVGFSGVLFALKYVAQRRSPGVTE-VMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIYLEFPIIAL---FLRFLVPTRVIPSMYRRPRYTY 277
            D+KR F S   H DDMHL YNMISFL KG SLE      N+  LLL  S  TS   ++L  ++   L  +  M++C +GFSGV+FALK +    +P   E V G  + TRYA W+EL+LI +  PNASF+GHL GIL G+IY   P+  +   F+  L   R+I  +     YT+
Sbjct:   68 DYKRLFFSTFEHGDDMHLYYNMISFLVKGRSLERRYGSTNFAFLLLMISALTSVIYVVLGQLLTKTLQDEYYMKTCAIGFSGVIFALKVLTSSETPRGREFVGGLWVPTRYAAWIELILIHLLVPNASFMGHLAGILAGVIYTSTPVGTIADEFISLLTGERIIHGVSYYQSYTF 242          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: T1IFL8_RHOPR (Rhomboid domain-containing protein n=2 Tax=Rhodnius prolixus TaxID=13249 RepID=T1IFL8_RHOPR)

HSP 1 Score: 126 bits (316), Expect = 2.530e-30
Identity = 70/166 (42.17%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   88 HSVCLLPNAMWDTYRRTGWFDFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLL-LFSTFTSQALLLLASVVLMALGADGAMQSCTVGFSGVLFALKYVAQRRSPGVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIYLEFPI 252
            H VC+    +W  Y +    ++K   LS   HADDMHL YNMISFL KG +LE      N+  LL +    TS   + L  ++   L     + SC +GFSGV+FALK +    S G + +MG ++ T+YA W EL+ I I  PNASFLGHL GI+ G++Y++ P+
Sbjct:   56 HDVCISAKKVW--YDK----NYKTLLLSTFEHADDMHLYYNMISFLLKGRTLEPLYGSANFALLLSILCLMTSSIYVSLGVLLSNVLNDSSLLYSCAIGFSGVIFALKIITTDNSSGSSVIMGIRVPTKYAAWAELIAIHILVPNASFLGHLAGIIAGVLYVKTPL 215          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: A0A482UPC4_9ARCH (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPC4_9ARCH)

HSP 1 Score: 124 bits (310), Expect = 1.010e-29
Identity = 80/253 (31.62%), Postives = 128/253 (50.59%), Query Frame = 0
Query:   10 RRRERQPYA----IVLALQLFQKIANLKKKPSLTLVLMVAMSLLHVKSD-LFQDFMSSSGRHSSGHLELGWWNIGGWYHHDFVHSVCLLPNAMWDTYRRTGWFDFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLLLFSTFTSQALLLLASVVLMALGAD---GAMQSCTVGFSGVLFALKYVAQRRSPGVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIYLEFPIIA 254
            RR +R P+     + L +Q+  ++  L  KP +TL L+    + H+  D  F D+  ++                       V   C+ P+ +  +        + R  L+   HADDMHL YNM+S L KG+ LE       +  L+++S   S  LL++ S V+ A+  +    +  SC +GFS VLF+LKYV  + SP  T ++GF++ +++A W EL+L S+  P  SF+GHL GIL G +Y+    +A
Sbjct:    6 RRNQRSPHVSPVVVSLLIQILSQLEKLPYKPPVTLGLLAMNIIAHIHPDPYFLDYSLTN-----------------------VRQNCIWPSLIVSSLTNNHSILWNRIVLAGFMHADDMHLYYNMLSLLWKGVQLEQQFGSFQFGILVVYSLLASHILLVVMSYVVYAVTQNIHISSYDSCAIGFSAVLFSLKYVLNQNSPAYTSILGFQVPSKWAAWAELVLASLLSPQVSFIGHLAGILAGYLYVHMDSVA 235          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: UPI00193D3A59 (rhomboid-related protein 4-like n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193D3A59)

HSP 1 Score: 123 bits (309), Expect = 1.760e-29
Identity = 72/161 (44.72%), Postives = 97/161 (60.25%), Query Frame = 0
Query:   89 SVCLLPNAMWDTYRRTGWFDFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLLLFSTFTSQALLL-LASVVLMALGADGAMQSCTVGFSGVLFALKYVAQRRS-PGVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIY 247
             VCL  + +W++       +F+R  LS + HADDMHL +NM S L KG  LE      N+  L+LF T T+ A+ + LA  +   L     M+SC +GFSGVLFALK V  + S P   ++ G  +D+RYA W+EL+ I    PNASFLGHL GIL G++Y
Sbjct:   57 DVCLSADKVWNS------LEFRRMLLSTLEHADDMHLYFNMGSLLLKGSFLERKYWSANFSILILFFTLTTNAIYVSLALGLSYILNNPAVMESCAIGFSGVLFALKVVTTQESRPTYMQIEGLWVDSRYAPWVELIAIHFAVPNASFLGHLAGILAGVLY 211          
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Match: A0A7R9JUS6_TIMGE (Hypothetical protein n=4 Tax=Timema TaxID=61471 RepID=A0A7R9JUS6_TIMGE)

HSP 1 Score: 124 bits (310), Expect = 1.900e-29
Identity = 69/147 (46.94%), Postives = 91/147 (61.90%), Query Frame = 0
Query:  108 DFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVGLL-LFSTFTSQALLLLASVVLMALGADGAMQSCTVGFSGVLFALKYVAQRRSP-GVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIYLEFPI 252
            D+KR F+SPV H DD+HL YNMISFL KG SLE      N+  LL + +T TS   + L  + +        M+SC +GFSGV+FALK V  +  P G++ + G  +  RYA W EL+LI I  P ASF+GHL GIL G++Y   P+
Sbjct:   70 DYKRLFVSPVEHGDDLHLYYNMISFLVKGRSLETRYGSPNFALLLAILTTLTSFMYVGLGRLCMEVFQDQYYMKSCAIGFSGVIFALKVVTSKEEPQGMSNIGGVLLPVRYAAWAELVLIHILVPRASFMGHLAGILAGLLYTSTPL 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4247.10850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN1_ECTSI3.390e-7547.87Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A0K8SJN0_LYGHE7.500e-3249.66Rhomboid domain-containing protein n=5 Tax=Mirini ... [more]
A0A836CHG7_9STRA1.070e-3137.59Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2TY11_9EUKA1.150e-3137.92Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
UPI0006D4F5D81.900e-3144.10rhomboid-related protein 4-like isoform X1 n=2 Tax... [more]
A0A067QXX6_ZOONE1.170e-3044.00Rhomboid domain-containing protein 1 n=1 Tax=Zoote... [more]
T1IFL8_RHOPR2.530e-3042.17Rhomboid domain-containing protein n=2 Tax=Rhodniu... [more]
A0A482UPC4_9ARCH1.010e-2931.62Rhomboid family intramembrane serine protease (Fra... [more]
UPI00193D3A591.760e-2944.72rhomboid-related protein 4-like n=1 Tax=Nilaparvat... [more]
A0A7R9JUS6_TIMGE1.900e-2946.94Hypothetical protein n=4 Tax=Timema TaxID=61471 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 311..331
NoneNo IPR availablePANTHERPTHR43066RHOMBOID-RELATED PROTEINcoord: 13..292
NoneNo IPR availablePANTHERPTHR43066:SF1RHOMBOID-RELATED PROTEIN 4coord: 13..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..177
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 236..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..261
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 262..373
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 102..248
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 239..261
NoneNo IPR availableTMHMMTMhelixcoord: 177..196
NoneNo IPR availableTMHMMTMhelixcoord: 216..235
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 94..253
e-value: 1.0E-10
score: 43.4
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 109..248
e-value: 2.5E-15
score: 56.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4247contigH-paniculata_contig4247:6183..9861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4247.10850.1mRNA_H-paniculata_contig4247.10850.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4247 6183..9861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4247.10850.1 ID=prot_H-paniculata_contig4247.10850.1|Name=mRNA_H-paniculata_contig4247.10850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=373bp
MRYYYPRQRRRRERQPYAIVLALQLFQKIANLKKKPSLTLVLMVAMSLLH
VKSDLFQDFMSSSGRHSSGHLELGWWNIGGWYHHDFVHSVCLLPNAMWDT
YRRTGWFDFKRFFLSPVTHADDMHLCYNMISFLSKGMSLELTMHRQNYVG
LLLFSTFTSQALLLLASVVLMALGADGAMQSCTVGFSGVLFALKYVAQRR
SPGVTEVMGFKIDTRYATWLELLLISIFFPNASFLGHLMGILTGIIYLEF
PIIALFLRFLVPTRVIPSMYRRPRYTYTSGTASSGTARAPAAASSRTSKA
PSPVKKSSPSQAALAAEQEELEKAIRRSLENSGGLDVEEEGSVSENPRVV
PSAPNMEADMTTAGQNNGGGNWE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom