prot_H-paniculata_contig42407.10842.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42407.10842.1
Unique Nameprot_H-paniculata_contig42407.10842.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
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BLAST of mRNA_H-paniculata_contig42407.10842.1 vs. uniprot
Match: A0A6H5JW59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW59_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 7.180e-22
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 0 
Query:  129 TCF-GDSPLLPVDAAVPLGRLERGAECGASVRLTAVRTGLARLSTLCLRDVITGAIYAPASPYEVFVE 195
            TC  GD  LLPVDAAVPLGRLERGAE GA+VRLTA R GLARLS+LCLRD +TG++YAP+ PYEVFVE
Sbjct:  327 TCLLGD--LLPVDAAVPLGRLERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVYAPSCPYEVFVE 392
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BLAST of mRNA_H-paniculata_contig42407.10842.1 vs. uniprot
Match: D7FI50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI50_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 7.370e-21
Identity = 52/68 (76.47%), Postives = 58/68 (85.29%), Query Frame = 0 
Query:  129 TCF-GDSPLLPVDAAVPLGRLERGAECGASVRLTAVRTGLARLSTLCLRDVITGAIYAPASPYEVFVE 195
            TC  GD  LLPVDAAVPLGRLERGAE GA+VRLTA R GLARLS+LCLRD +TG++Y P+ PYEVFVE
Sbjct:  653 TCLLGD--LLPVDAAVPLGRLERGAEHGATVRLTAARAGLARLSSLCLRDALTGSVYVPSCPYEVFVE 718
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42407.10842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JW59_9PHAE7.180e-2277.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI50_ECTSI7.370e-2176.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42407contigH-paniculata_contig42407:464..1615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42407.10842.1mRNA_H-paniculata_contig42407.10842.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42407 410..1653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42407.10842.1 ID=prot_H-paniculata_contig42407.10842.1|Name=mRNA_H-paniculata_contig42407.10842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
MFTKNGDGGEQAEASGVRGEGKVKLTLDRVRVEGLAGGSGDSSDAGGDNE
DDDEDGSNTQRSSSRFRSTGSTNYRPPVSPSYPTATTTKPKNSTRTSSVR
FPTETPSPPLHHPQQAPTRPITGVAPGNTCFGDSPLLPVDAAVPLGRLER
GAECGASVRLTAVRTGLARLSTLCLRDVITGAIYAPASPYEVFVE*
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