prot_H-paniculata_contig4239.10838.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4239.10838.1
Unique Nameprot_H-paniculata_contig4239.10838.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig4239.10838.1 vs. uniprot
Match: D8LIL7_ECTSI (Protein phosphatase 1, regulatory subunit, and related proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL7_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.700e-29
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
Query:    1 LDTAVIDEDLIGGALVEEADADQTISSMTTFELAQVVAEAATLRLSYKNVLKIDNLQGFSRLTKLC 66
            LDTAVIDEDLIGGAL+EEAD DQ ISSMTTFELAQVVAEA TLRLSYKNVLKIDNLQGFSRLTKLC
Sbjct:   10 LDTAVIDEDLIGGALMEEADGDQHISSMTTFELAQVVAEATTLRLSYKNVLKIDNLQGFSRLTKLC 75          
BLAST of mRNA_H-paniculata_contig4239.10838.1 vs. uniprot
Match: A0A835Z751_9STRA (Protein phosphatase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z751_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.070e-20
Identity = 44/66 (66.67%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 LDTAVIDEDLIGGALVEEADADQTISSMTTFELAQVVAEAATLRLSYKNVLKIDNLQGFSRLTKLC 66
            ++ AVIDE++I  AL++E+  DQ ++SM TFELAQVV+ A+TLRLSYK++LKIDNLQGFS LTKLC
Sbjct:   12 VEAAVIDEEMIASALIDESGGDQNMTSMATFELAQVVSAASTLRLSYKHILKIDNLQGFSSLTKLC 77          
BLAST of mRNA_H-paniculata_contig4239.10838.1 vs. uniprot
Match: A0A7S2CTN6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTN6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.390e-12
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    2 DTAVIDEDLIGGALV-EEADADQTISSMTTFELAQVVAEAATLRLSYKNVLKIDNLQGFSRLTKLC 66
            +TAVID+++I GA   EEA  +    S  T  LA+++ +A TLRLS+KNVLKIDNLQGF+ LTKLC
Sbjct:   47 ETAVIDDEMIAGAFRDEEAAGEGEKKSSGTAVLAEIIGDATTLRLSFKNVLKIDNLQGFNSLTKLC 112          
BLAST of mRNA_H-paniculata_contig4239.10838.1 vs. uniprot
Match: F0YI88_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI88_AURAN)

HSP 1 Score: 59.7 bits (143), Expect = 8.020e-9
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    5 VIDEDLIGGALVE----EADADQTISSMTTFELAQVVAEAATLRLSYKNVLKIDNLQGFSRLTKLC 66
            VID++LI  AL E    ++  D T   ++   LA +VAEA  L LS+KNVLKIDNLQGF  L KLC
Sbjct:   10 VIDDELIATALRETISTKSPMDATTKELSASALADMVAEATELSLSFKNVLKIDNLQGFQTLRKLC 75          
BLAST of mRNA_H-paniculata_contig4239.10838.1 vs. uniprot
Match: A0A7S3ZLM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLM5_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.070e-6
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    5 VIDEDLIGGALVEEADADQTISS----MTTFELAQVVAEAATLRLSYKNVLKIDNLQGFSRLTKLC 66
            VID+DLI  AL E     Q ++S    +    LA + A+A  LRLS+KNVL+IDNLQGF  L  LC
Sbjct:    4 VIDQDLISSALQEGT---QLVTSDGSGINGDTLADIAAKATELRLSFKNVLEIDNLQGFHALRTLC 66          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4239.10838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LIL7_ECTSI1.700e-2993.94Protein phosphatase 1, regulatory subunit, and rel... [more]
A0A835Z751_9STRA8.070e-2066.67Protein phosphatase 1 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2CTN6_9STRA2.390e-1257.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YI88_AURAN8.020e-953.03Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZLM5_9STRA3.070e-650.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4239contigH-paniculata_contig4239:13059..13772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4239.10838.1mRNA_H-paniculata_contig4239.10838.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4239 13059..13772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4239.10838.1 ID=prot_H-paniculata_contig4239.10838.1|Name=mRNA_H-paniculata_contig4239.10838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
LDTAVIDEDLIGGALVEEADADQTISSMTTFELAQVVAEAATLRLSYKNV
LKIDNLQGFSRLTKLC
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