mRNA_H-paniculata_contig4213.10799.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: D8LEU8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU8_ECTSI) HSP 1 Score: 171 bits (433), Expect = 1.010e-49 Identity = 80/106 (75.47%), Postives = 93/106 (87.74%), Query Frame = 3
Query: 309 ELQECEVTFPIIADAGGDIFALLGLVRGDAIDPAQGIVPQTTLFVTDLDLRVKMISQYPCTVGQNYYETLRAIDAIQQATFNRVGMPANWKEGEDVLVDGSVSNTA 626
ELQ+CE+ FPIIADA G+IF+LLGLVR DA+DP +G+VPQT+L V DLDLRV+MI QYPCTVG NYYE LRAIDA+QQATFNRVG+PANWKEGEDVLV +V T+
Sbjct: 107 ELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVPQTSLLVIDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVILTS 212
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: A0A6U1N900_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N900_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.260e-26 Identity = 49/84 (58.33%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 43 PLQIGDEIPNFTCDSHMGVITLHSYIDGGWGAILTYPRNNDPVACTELGMMSKLAEEFDERNCKLLAIGMDSKTAHRAFIKETQ 294
PLQIGDE PNF+CDS +G++T+H + G WG +LT+PR+ DPV TEL M+SKL++EF+ RN +L I DSKT HR +I+ETQ
Sbjct: 55 PLQIGDEAPNFSCDSTVGLVTMHELVAGNWGLLLTFPRDFDPVGTTELAMVSKLSDEFEARNIVVLGISPDSKTQHRMWIQETQ 138
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: A0A421GR59_9STRA (1-cysPrx_C domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GR59_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.310e-23 Identity = 52/125 (41.60%), Postives = 77/125 (61.60%), Query Frame = 3
Query: 267 PQSVHQGNSGMKSSELQECEVTFPIIADAGGDIFALLGLVRGDAIDPAQ--GIVPQTTLFVTDLDLRVKMISQYPCTVGQNYYETLRAIDAIQQATFNRVGMPANWKEGEDVLVDGSVSNTAAQR 635
PQ+ H +E QE +V FP++AD G++ LG++ A A G +P + + + DLDL V+M+S YP VG+N+YE LRA+DA+Q +TF +V P NWK EDV V+ V+ AA++
Sbjct: 43 PQARHPAPFLSDVNETQEVKVGFPVLADEDGELSRRLGVIAAGAPKHAADAGRLPFSCMIILDLDLTVRMLSYYPMGVGRNFYEVLRALDALQLSTFEQVVTPVNWKVSEDVFVEPDVTADAAKK 167
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: A0A835YS60_9STRA (1-cysPrx_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS60_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.390e-23 Identity = 43/77 (55.84%), Postives = 60/77 (77.92%), Query Frame = 3
Query: 384 VRGDAIDPAQGIVPQTTLFVTDLDLRVKMISQYPCTVGQNYYETLRAIDAIQQATFNRVGMPANWKEGEDVLVDGSV 614
++ A + QG +PQTTL++ DLD RV+++ QYP VG N+YE LRA+DA+Q ATF++VG+PANWKEGEDV + +V
Sbjct: 1 MKSAAAEGNQGFLPQTTLYLIDLDKRVRLMMQYPAVVGCNFYEALRAMDALQLATFHQVGVPANWKEGEDVFIGANV 77
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: A0A2D4BJJ7_PYTIN (Thioredoxin domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJJ7_PYTIN) HSP 1 Score: 102 bits (253), Expect = 4.190e-23 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 3
Query: 306 SELQECEVTFPIIADAGGDIFALLGLVRGDAIDPAQGI--VPQTTLFVTDLDLRVKMISQYPCTVGQNYYETLRAIDAIQQATFNRVGMPANWKEGEDVLVDGSVSNTAAQR 635
+E QE +V+FP++ADA G++ LGL+ +A +P + V D+DL V+ IS YP +VG+N+YE LRA+DA Q ATFN+V P NW+ EDV V+ + AA++
Sbjct: 91 NETQEVKVSFPVVADADGELSRALGLIAANAPKHTADAHRLPYSCTIVLDIDLTVRFISYYPLSVGRNWYEVLRAVDAFQLATFNQVVTPTNWRINEDVFVEPDLKTDAAKK 202
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: A0A2D4CFE1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFE1_PYTIN) HSP 1 Score: 102 bits (255), Expect = 5.650e-22 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 3
Query: 306 SELQECEVTFPIIADAGGDIFALLGLVRGDAIDPAQGI--VPQTTLFVTDLDLRVKMISQYPCTVGQNYYETLRAIDAIQQATFNRVGMPANWKEGEDVLVDGSVSNTAAQR 635
+E QE +V+FP++ADA G++ LGL+ +A +P + V D+DL V+ IS YP +VG+N+YE LRA+DA Q ATFN+V P NW+ EDV V+ + AA++
Sbjct: 319 NETQEVKVSFPVVADADGELSRALGLIAANAPKHTADAHRLPYSCTIVLDIDLTVRFISYYPLSVGRNWYEVLRALDAFQLATFNQVATPTNWRINEDVFVEPDLKTDAAKK 430
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: A0A662XFT7_9STRA (Thioredoxin domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XFT7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.430e-21 Identity = 50/114 (43.86%), Postives = 73/114 (64.04%), Query Frame = 3
Query: 306 SELQECEVTFPIIADAGGDIFALLGLVRGDA----IDPAQGIVPQTTLFVTDLDLRVKMISQYPCTVGQNYYETLRAIDAIQQATFNRVGMPANWKEGEDVLVDGSVSNTAAQR 635
+E QE ++ FP++AD G++ LGLV A D A+ +P + V DLDL V+++S YP VG+N+YE LRA+DA+Q +TF +V P NWK EDV V+ V+ AA++
Sbjct: 92 NETQEVKLGFPVLADEDGELSRRLGLVAAGAPRHAADAAR--LPFSCTVVVDLDLTVRLLSYYPMGVGRNFYEVLRALDALQLSTFEQVVTPVNWKVSEDVFVEPDVTTAAAKK 203
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: W2PIQ9_PHYPN (Thioredoxin domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2PIQ9_PHYPN) HSP 1 Score: 96.7 bits (239), Expect = 4.380e-21 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 3
Query: 306 SELQECEVTFPIIADAGGDIFALLGLVRGDAIDPAQ--GIVPQTTLFVTDLDLRVKMISQYPCTVGQNYYETLRAIDAIQQATFNRVGMPANWKEGEDVLVDGSVSNTAAQR 635
+E QE +V FP++AD G++ LGLV A A G +P + V DLDL V+M++ YP +VG+N+YE +R++DA+Q TF +V P NWK +DV V+ V+ AA++
Sbjct: 87 NETQEVKVGFPVLADEDGELSRRLGLVVAGAPKHAADAGRLPFSCTIVLDLDLTVRMLTYYPMSVGRNFYEVIRSLDALQLCTFEQVVTPVNWKVSDDVFVEPDVTADAAKK 198
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: A0A225WXB8_9STRA (Peroxidase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WXB8_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.470e-21 Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 3
Query: 306 SELQECEVTFPIIADAGGDIFALLGLVRGDAIDPAQ--GIVPQTTLFVTDLDLRVKMISQYPCTVGQNYYETLRAIDAIQQATFNRVGMPANWKEGEDVLVDGSVSNTAAQR 635
+E QE ++ FP++AD G++ LGLV A A G +P + V DLDL V+M++ YP VG+N+YE LRA+DA+Q TF +V P NWK +DV V+ V+ AA++
Sbjct: 89 NETQEVKLRFPVLADEDGELTRRLGLVAAGAPKHAADAGRLPFSCTLVLDLDLTVRMLTYYPMGVGRNFYEVLRALDALQLNTFEQVVTPVNWKVSDDVFVEPDVTAEAAKK 200
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Match: K3XAE5_GLOUD (Thioredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAE5_GLOUD) HSP 1 Score: 94.7 bits (234), Expect = 2.580e-20 Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 31 VQPRPLQIGDEIPNFTCDSHMGVITLHSYIDGGWGAILTYPRNNDPVACTELGMMSKLAEEFDERNCKLLAIGMDSKTAHRAFIKETQA*NPRNCKNVRSRFP 339
V P+ LQIG ++PN + +GV+ +H Y+DG WG + T+P+ + PV TELGMM KL ++FD RNC+LLA+ +DS F+++ ++V+ FP
Sbjct: 4 VVPKELQIGAKLPNIIGQTQVGVVGVHDYMDGAWGVLCTFPQTHHPVWMTELGMMQKLKDQFDARNCRLLALNIDSVKQQEQFLQDVN-----ETQDVKVNFP 101 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4213.10799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4213.10799.1 >prot_H-paniculata_contig4213.10799.1 ID=prot_H-paniculata_contig4213.10799.1|Name=mRNA_H-paniculata_contig4213.10799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp MKSSELQECEVTFPIIADAGGDIFALLGLVRGDAIDPAQGIVPQTTLFVTback to top mRNA from alignment at H-paniculata_contig4213:11027..13765+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4213.10799.1 ID=mRNA_H-paniculata_contig4213.10799.1|Name=mRNA_H-paniculata_contig4213.10799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2739bp|location=Sequence derived from alignment at H-paniculata_contig4213:11027..13765+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4213:11027..13765+ >mRNA_H-paniculata_contig4213.10799.1 ID=mRNA_H-paniculata_contig4213.10799.1|Name=mRNA_H-paniculata_contig4213.10799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=696bp|location=Sequence derived from alignment at H-paniculata_contig4213:11027..13765+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |