prot_H-paniculata_contig4201.10774.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4201.10774.1
Unique Nameprot_H-paniculata_contig4201.10774.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5KIP2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP2_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 6.050e-13
Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   RN++   L + Q  +   +A  + V     +P  SG   LS  D      +E  T+FP RE VG+LMW AT TRP++A A+RAVAR+C +P   ++ A I I+
Sbjct:  855 GCFYERNKETGRLTISQQTFTDELAAEYGVVGGKSVPMSSGV-KLSDFDA-----DEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCPSPKQVHRDAAIDIL 956          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.550e-12
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  A  LK+ Q  Y + +   F VE    IP   G   LS+ D+     +EE+  +P RE +G+LMW AT TRP++A A+RAVAR+C +P   + +A + I+
Sbjct:   59 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGM-KLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGIL 160          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5KDF0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDF0_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.850e-12
Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  AR LK+ Q  Y + +   F VE    IP  +G   LS+ D+     +EE+  +  RE +G+LMW AT TRP++A A+RAVAR+  +P   + +AV+ IV
Sbjct:  664 GCFYERDWDARTLKISQQTYAEELGMEFGVEYGKEIPLPAGL-KLSEFDQ-----DEEVVSWSFRELIGSLMWLATQTRPDIANAVRAVARYFASPKEIHWRAVLGIV 765          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.520e-12
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  A  LK+ Q  Y + +   F VE    IP   G   LS+ D+     +EE+  +P RE +G+LMW AT TRP++A A+RAVAR+C +P   + +A + I+
Sbjct:  101 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGIL 202          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.530e-12
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  A  LK+ Q  Y + +   F VE    IP   G   LS+ D+     +EE+  +P RE +G+LMW AT TRP++A A+RAVAR+C +P   + +A + I+
Sbjct:  160 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGIL 261          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.770e-12
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  A  LK+ Q  Y + +   F VE    IP   G   LS+ D+     +EE+  +P RE +G+LMW AT TRP++A A+RAVAR+C +P   + +A + I+
Sbjct:  334 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGIL 435          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5K9I1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I1_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.900e-12
Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  A  LK+ Q  Y + +   F VE    IP   G   LS+ D+     +EE+  +P RE +G+LMW AT TRP++A A+RAVAR+C +P   + +A I I+
Sbjct:  706 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPIEIHWRAGIGIL 807          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.900e-12
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  AR LK+ Q  Y Q +   F VE    I    G   LS+ D+     +EE+  +P RE +G+LMW AT TRPN+A A RAVAR+C +P   + +A + I+
Sbjct:   15 GCVYERDWDARILKISQQTYAQELGMDFGVEYGKEILFPVGL-KLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGIL 116          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5LC04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC04_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.940e-12
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  A  LK+ Q  Y + +   F VE    IP   G   LS+ D+     +EE+  +P RE +G+L+W AT TRP++A ALRAVAR+C +P   + +A + I+
Sbjct:  851 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-VLSEFDQ-----DEEVVSWPFRELIGSLVWLATQTRPDIANALRAVARYCASPKEIHWRAGLGIL 952          
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.940e-12
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 GCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGDEQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPAYKKAVIKIV 109
            GC   R+  A  LK+ Q  Y + +   F VE    IP   G   LS+ D+     +EE+  +P RE +G+LMW AT TRP++A A+RAVAR+C +P   + +A + I+
Sbjct:  855 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGIL 956          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4201.10774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIP2_9PHAE6.050e-1338.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KR24_9PHAE2.550e-1238.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDF0_9PHAE2.850e-1239.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L0Z9_9PHAE3.520e-1238.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE3.530e-1238.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE3.770e-1238.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K9I1_9PHAE3.900e-1239.81Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KD60_9PHAE3.900e-1240.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LC04_9PHAE3.940e-1238.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2R1_9PHAE3.940e-1238.89Integrase catalytic domain-containing protein n=3 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4201contigH-paniculata_contig4201:5785..6114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4201.10774.1mRNA_H-paniculata_contig4201.10774.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4201 5773..6348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4201.10774.1 ID=prot_H-paniculata_contig4201.10774.1|Name=mRNA_H-paniculata_contig4201.10774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MGCHVTRNRKARELKLDQHMYVQSMAETFVVEKTSRIPAMSGAPALSKGD
EQKTSEEEEMTEFPNREAVGALMWTATMTRPNLACALRAVARFCENPGPA
YKKAVIKIV*
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