mRNA_H-paniculata_contig4180.10733.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: A0A6H5KL00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL00_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.330e-52 Identity = 97/159 (61.01%), Postives = 114/159 (71.70%), Query Frame = 1
Query: 538 FVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLFGDY 1014
FVLQLC FHN+ + T LTPE+F SY FHEVWGGTR E+DAKM FF+S +FL DGIP + GA EVLRKH L ++VTSRQ+ L+ T+ WI HY IFA L FGNH S EG +RSKPDLCR I A MIIDDN YA +CA+AGIR+ LF +
Sbjct: 2 FVLQLCTFHNDKHGTSLTPESFNSYYFHEVWGGTRAEADAKMVEFFKSPYFL-----DGIPPLAGAAEVLRKHSRSLNFYLVTSRQDSLQAHTKRWIDAHYPGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNTTYATECASAGIRSLLFAPH 155
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: F2TZR2_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZR2_SALR5) HSP 1 Score: 179 bits (454), Expect = 1.300e-47 Identity = 89/197 (45.18%), Postives = 123/197 (62.44%), Query Frame = 1
Query: 493 SKPVVAVDIDEVLGYFVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLFGDYAWNRSSGD-LPSNIYRTLNWNDV 1080
+PV+AVD+DEVLGYFV LC+FHN+ Y T F SY F +VWGGT+EES K+ F ESKHF +G+ +V GA E L K +K +L +VTSRQ+I+ T W+ H+ + F + FGNH L GE +SKP++C I A ++IDD + YA +CA + LFG+Y+WN + LP + R +W+ V
Sbjct: 12 KRPVIAVDLDEVLGYFVDALCEFHNDKYGTTYKASDFHSYTFQDVWGGTKEESSKKVHDFLESKHFK-----NGLRLVPGAQEALAKLAEKYDLVIVTSRQHIIAPETHEWVETHFPNTFKSILFGNHWGLHGEKKSKPEMCTAIGAAVLIDDALHYARECAGHLQKVLLFGEYSWNAADDTALPEGVVRVRDWDAV 203
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: A0A7S2XXR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR2_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.920e-47 Identity = 87/176 (49.43%), Postives = 115/176 (65.34%), Query Frame = 1
Query: 496 KPVVAVDIDEVLGYFVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLFGDYAWN 1023
K V+AVD+D+ + F+ L FHN+AY T L + F SY F EVWGGTREE+DAKM FF S F I + ++ +L+ K++ ELHVVTSRQ+ L+E T WI H D+F +HFGNH+ EG +SKP +C+DI AV +IDD++RYA C+ AGI LFG Y+WN
Sbjct: 14 KRVLAVDLDDTICGFIPALVAFHNQAYGTALEVKDFHSYDFWEVWGGTREETDAKMTQFFGSNFFAT------IQPLPNSIRLLKTLKERFELHVVTSRQHFLEESTRAWIQAHLPDVFTNIHFGNHYGTEGAKKSKPAMCQDIGAVALIDDSLRYAKSCSEAGIPVVLFGGYSWN 183
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: A0A7S0XCX5_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCX5_9STRA) HSP 1 Score: 184 bits (467), Expect = 6.910e-46 Identity = 83/178 (46.63%), Postives = 125/178 (70.22%), Query Frame = 1
Query: 493 SKPVVAVDIDEVLGYFVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLFGDYAWNR 1026
+KP++A+DIDEVL +F+ +L FHNE Y T LT E F Y+FH+VWGG+ EE+ +K+ FF+S + E + V G+ + L+ K LH+VTSRQ+I++++T WI ++Y DIF ++HFGNH++ G RSK D+C+DI+A++++DD++ YA CA++GI LFG Y WNR
Sbjct: 13 NKPIIAIDIDEVLAHFIPKLADFHNENYGTSLTVEHFNCYEFHKVWGGSLEETSSKVMSFFDSPYIHE------LSTVSGSYDALKLLKQDFSLHIVTSRQHIVEDLTRQWIYKNYPDIFDEIHFGNHYTKNGISRSKSDICKDINALLLVDDSLIYAKNCASSGIPVILFGHYPWNR 184
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: A0A4D9D138_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D138_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.550e-45 Identity = 104/214 (48.60%), Postives = 136/214 (63.55%), Query Frame = 1
Query: 493 SKP--VVAVDIDEVLGYFVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDK-LELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCA-NAGIRTCLFGDYAWNRSS-----GDLPSNIYRTLNWNDVD---EALLS 1098
S+P VVAVD+DEVLG FV L +FHNE Y LT + F SY F VWGGTREE++AK+ FF+S HF E +P + A VL+ KD+ ++ HVVTSRQ ++ TE W+ +HY IF LH+GNH+S G RSK ++C I A +++DD++RYA Q A +AGI LFGDYAWN++ LP +I R W DV EALL+
Sbjct: 5 SRPPLVVAVDLDEVLGLFVEILARFHNEVYGGSLTADDFHSYDFVHVWGGTREEANAKVLAFFKSSHFQEE-----LPPIRDAFPVLKALKDEGVDFHVVTSRQFCIQRETEEWVQKHYPGIFTGLHYGNHYSATGPQRSKGEMCEAIKAQLLVDDSLRYAHQVAQDAGIPVLLFGDYAWNQADPSLPPSSLPPSITRVTRWEDVRVHIEALLA 213
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: D7FZT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT5_ECTSI) HSP 1 Score: 167 bits (424), Expect = 2.480e-42 Identity = 85/148 (57.43%), Postives = 103/148 (69.59%), Query Frame = 1
Query: 661 MRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLFGDYAWNRSSGDLPSNIYRTLNWNDVDEALLSVV 1104
M FF++ +FL DGIP + GA EVLRKH L ++VTSRQ+ L+ T+ WI HY IFA L FGNH S EG +RSKPDLCR I A MIIDDN +YA +CA+AGIRT LFGDYAWNR+ G LP+N+ R W +VD L S+V
Sbjct: 1 MIEFFKTPYFL-----DGIPPLAGAAEVLRKHSRTLTFYLVTSRQDSLQAHTKRWIDAHYPGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNTKYATECASAGIRTLLFGDYAWNRTDGPLPANVLRVPTWAEVDAELQSIV 143
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: A0A0B2SB70_GLYSO (Uncharacterized protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=A0A0B2SB70_GLYSO) HSP 1 Score: 164 bits (415), Expect = 3.170e-41 Identity = 85/208 (40.87%), Postives = 131/208 (62.98%), Query Frame = 1
Query: 493 SKPVVAVDIDEVLGYFVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLF---GDYAWNRS-SGDLPSNIYRTLNWNDVDEALLSVV 1104
K VVAVD+DEVLG FV L KF + Y++ + + Y+F ++W +R+E++ ++ FFE+ +F G I + GA L+K L VVTSRQN++K+ T WI +H+S +F ++HFGNH +L+G R K ++CR I+A ++IDDN RYA++CA AGIR LF Y W+++ S D + + NW +V++ L+S+V
Sbjct: 102 QKLVVAVDVDEVLGNFVSALNKFIADRYSSNCSVSEYHVYEFFKIWNCSRDEANTRVHEFFETPYFKSG-----IQPIPGAQTSLQKLSTFCSLSVVTSRQNVIKDHTLEWIEKHFSGLFQEIHFGNHFALDGMSRPKSEICRSINATVLIDDNPRYAIECAEAGIRVLLFDYENSYPWSKTNSADEHPLVIKVKNWEEVEQQLMSLV 304
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: A0A6J1JK81_CUCMA (uncharacterized protein LOC111485341 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JK81_CUCMA) HSP 1 Score: 162 bits (410), Expect = 1.960e-40 Identity = 88/211 (41.71%), Postives = 130/211 (61.61%), Query Frame = 1
Query: 493 SKPVVAVDIDEVLGYFVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLF---GDYAWNRSS-GDLPSNIYRTLNWNDVDEALLSVVQDA 1113
K VVAVDIDEVLG FV L KF + Y++ + + Y+F +W +R+E++ ++ FF++ +F G I + GA +L K L VVTSRQN +KE T WI +HY +F ++HFGNH +L+GE RSK ++C+ + A ++IDDN RYA++CA AGIR LF Y W ++ DLP+ + + NW DV++ L S V+ +
Sbjct: 112 DKLVVAVDIDEVLGNFVSALNKFVADQYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG-----IWPIPGAQSMLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTGYEDLPALVTKVHNWEDVEQQLTSWVRSS 317
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: A0A1S3U1I8_VIGRR (uncharacterized protein LOC106760946 n=6 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3U1I8_VIGRR) HSP 1 Score: 162 bits (409), Expect = 2.000e-40 Identity = 84/208 (40.38%), Postives = 131/208 (62.98%), Query Frame = 1
Query: 493 SKPVVAVDIDEVLGYFVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLF---GDYAWNRS-SGDLPSNIYRTLNWNDVDEALLSVV 1104
K VVAVD+DEVLG FV L +F + Y++ + + Y+F ++W +R+E++ ++ FFE+ +F G I + GA LRK L VVTSRQN++K+ T WI +H+S +F +HFGNH +L+G R K D+CR ++A ++IDDN RYA++CA AGI+ LF Y W+++ S D + + NW++V++ L+S+V
Sbjct: 102 QKLVVAVDVDEVLGNFVSALNEFIADRYSSSHSVSEYHVYEFFKIWNCSRDEANTRVHEFFETSYFKSG-----IQPIPGAQVALRKLSRFCNLSVVTSRQNVIKDHTIEWIEKHFSGLFQDIHFGNHFALDGVSRPKSDICRSLNANILIDDNPRYAIECAEAGIKVLLFDYENSYPWSKTDSADQHPLVTKVKNWDEVEQQLMSLV 304
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Match: A0A5J4XZV6_9CHLO (Haloacid dehalogenase-like hydrolase superfamily n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XZV6_9CHLO) HSP 1 Score: 161 bits (407), Expect = 2.470e-40 Identity = 87/206 (42.23%), Postives = 133/206 (64.56%), Query Frame = 1
Query: 505 VAVDIDEVLGYFVLQLCKFHNEAYNTQLTPEAFTSYQFHEVWGGTREESDAKMRLFFESKHFLEGDQGDGIPVVDGAVEVLRKHKDKLELHVVTSRQNILKEMTEVWIAQHYSDIFAKLHFGNHHSLEGEIRSKPDLCRDIDAVMIIDDNVRYALQCANAGIRTCLFG---DYAWNRSSGDLPSN--IYRTLNWNDVDEALLSVVQ 1107
VAVD+DEVLG F+ L K+ E + + ++ Y FH++WG TR+ES+ + FF+S HF G + + GA+ L++ K +L +VTSRQ+++++ T W+ HY IFA++HFGNH +LEG +SK ++CR++ A ++IDDN YA++CANAGI L+ Y W++++ D PS+ I R +WNDV+EAL V Q
Sbjct: 90 VAVDVDEVLGRFLHSLNKYCLETHGLRFDIPDYSDYNFHKIWGCTRDESNHIVHEFFKSHHFAVG-----VLPMPGALHSLQRLKATSDLVIVTSRQHVIQKPTLDWLELHYPGIFAEVHFGNHWALEGTSKSKSEICRELGAKVLIDDNPIYAVECANAGINVLLYDWHLTYPWSKTA-DGPSHPLIRRVTDWNDVEEALAMVAQ 289 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4180.10733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4180.10733.1 >prot_H-paniculata_contig4180.10733.1 ID=prot_H-paniculata_contig4180.10733.1|Name=mRNA_H-paniculata_contig4180.10733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=514bp MSPAEASSPFSSTTTTNTTTTADHTMSSSSNSHSNSKPVVAVDIDEVLGYback to top mRNA from alignment at H-paniculata_contig4180:4488..13848- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4180.10733.1 ID=mRNA_H-paniculata_contig4180.10733.1|Name=mRNA_H-paniculata_contig4180.10733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9361bp|location=Sequence derived from alignment at H-paniculata_contig4180:4488..13848- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4180:4488..13848- >mRNA_H-paniculata_contig4180.10733.1 ID=mRNA_H-paniculata_contig4180.10733.1|Name=mRNA_H-paniculata_contig4180.10733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3084bp|location=Sequence derived from alignment at H-paniculata_contig4180:4488..13848- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |