mRNA_H-paniculata_contig4146.10658.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4146.10658.1
Unique NamemRNA_H-paniculata_contig4146.10658.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A6H5KXL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL5_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 6.280e-157
Identity = 238/337 (70.62%), Postives = 265/337 (78.64%), Query Frame = 2 
Query:  536 TLLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPL-SDVVFLSRHVAKSGVPSLCVHPIGVPDPSSSRDAGGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGKGG---RWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTEIGVEHKFKSSEC 1534
            TLLVGS+QDAA R +  ALLAR +WL+   G E      G+A+ H  +P S+W V GRLLDLD  DRRWA        +    QQQR    L SDVVFLS+HVAKSGVP+LCVHPIGVP+PSSS++AGGKPG CPPPSPRLAGCLREL RA REAGL+SSFD TLEVTHHGPWLETPAMFVEIGSSEE WGR DAAEVWA VLTR+LGLDGS     NW  LD AARA+R A+V +GGGHYAP+ GDLAR  G Y+GHMLASYALDFG+GG    WREAVTEAVRSTRAAFPGA GGV GGV ALVDKKAF++ ER+ LLEHL  +GVEH+FKSSEC
Sbjct:   68 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEHDGTRNGRAYRHKLSPTSLWLVEGRLLDLDDADRRWASASSVGSADEQQSQQQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELCRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWASVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 404
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: D8LBU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU1_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 1.020e-149
Identity = 227/325 (69.85%), Postives = 254/325 (78.15%), Query Frame = 2 
Query:  578 IMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPL---SDVVFLSRHVAKSGVPSLCVHPIGVPDPSSSRDAGGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGKGG---RWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTEIGVEHKFKSSEC 1534
            +  ALLAR +WL+   G E      GKA+ H  +P S+W V GRLLDLD  DRRWA       G    K  + +  PL   SDVVFLS+HVAKSGVP+LCVHPIGVP+PSSS++AGGKPG CPPPSPRLAGCLREL RA REAGL+SSFD TLEVTHHGPWLETPAMFVEIGSSEE WGR DAAEVWA+VLTR+LGLDGS     NW  LD AARA+R A+V +GGGHYAP+ GDLAR  G Y+GHMLASYALDFG+GG    WREAVTEAVRSTRAAFPGA GGV GGV ALVDKKAF++ ER+ LLEHL  +GVEH+FKSSEC
Sbjct:    1 MAEALLARGNWLETEPGVERDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASA--SSVGSTDEKPSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 323
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A836C895_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C895_9STRA)

HSP 1 Score: 268 bits (686), Expect = 4.700e-80
Identity = 157/386 (40.67%), Postives = 210/386 (54.40%), Query Frame = 2 
Query:  533 QTLLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPLSDVVFLSRHVAKSGVPSLCVHPIGVPDPSSSRDAGGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSP--------------------------------------------------------SQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGKGGRWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTEIGVEHKFK 1522
            +TL+V +  D AS  + +A+LAR+ W     GT+  ++   +AW H    + M  +   ++  D++D  +        G          +  L+DV+FLSRH A SG PSL  HPIG+P+P+    +GG PG CPPP+PR+A CLREL  AT  AGL S F+VT E THHGPWL+TPAMF EIGS+EE WGR+DAAEVWA+VL  +L L GS+P                                                         + +W  L +A RA    ++ LGGGHYAP+ GDLAR  G + GHMLA+YA D+G+GG WR AV EAV  TR+A PG        + ALVDKKAFK+A++  +   L E+ V  ++K
Sbjct:    9 KTLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPM-RAWEHRAGNIWMVCLEDSMIRADNIDEAFTS----SHG----------VSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRL-GSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGGWRTAVAEAVAVTRSAMPGC------RLAALVDKKAFKAAQKREVESLLEELAVRVEYK 372
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A4D9D3I1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3I1_9STRA)

HSP 1 Score: 225 bits (574), Expect = 3.420e-64
Identity = 142/348 (40.80%), Postives = 190/348 (54.60%), Query Frame = 2 
Query:  539 LLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAP--VSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPLSDVVFLSRHVAKSGVPSLCVHPIG------VPDPSSSRDAGGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARI-EGRYLGHMLASYALDFGKGGRWREAVTEAVRSTRAAF--PGACGGVEGG------VTALVDKKAFKSAERSLLLEHLTEIGVEHKFKSSE 1531
            LL+ + +D AS  ++ ALLAR  W +    T V   A  + W     P  V MW +    L  D +D+ W          +     QR    + +++FLSRH A SG PSL +HPIG       P   +  + GG PG C PPSPR+A   R+L  A ++AGL  +F+VTLE THHGPW   P MFVEIGS EE WGR+DAA VWADVL + LGL   S ++EN   +  AA   ++  VG GGGHY P+  DL R  E   +GH+LASY    G    W+  + EA+++TR A+  P      E G      V   +DKKAFKSA R  L+++L   G++  FK ++
Sbjct:   37 LLLATTEDKASVNMLQALLARGGWEEI---TPVD--ASSRVWHRPDGPQNVFMWQITQGFLRADWLDKAW----------LTAHPSQR----IQEMIFLSRHAAASGRPSLTIHPIGNPGQPFAPQEEARGEHGGIPGRCVPPSPRMAPLFRQLHGAVQDAGLAGTFEVTLEATHHGPWHMHPTMFVEIGSKEEDWGREDAAHVWADVLDKNLGL---SATEENGVSIP-AAEEPKLVIVGAGGGHYTPKMNDLLRHREDVLVGHILASYCFT-GSEEDWKRGIDEAIQATRRAYSLPSENEEEEDGGKEETRVCVYIDKKAFKSAPRQALVQYLESRGIQCAFKEND 360
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A2D9NJE9_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2D9NJE9_9EURY)

HSP 1 Score: 220 bits (560), Expect = 1.130e-62
Identity = 130/334 (38.92%), Postives = 186/334 (55.69%), Query Frame = 2 
Query:  536 TLLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPLSDVVFLSRHVAKSGVPSLCVHPIGVP--DPSSSRDAGGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGK--------GGRWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTEIGV 1507
            TL++ S  D AS    + LL + DW        +  + G  A+++    + MW   G +L  D +D RW    +++ GE V+           + +F SRH AKSG PSL +HPIGVP  D  +    GGK G  PPPSPRLA   R +  +     +ES FD++LEVTHHGPW+  P++FVE+GS+++ WG + AAE+ AD++ + LG++G++     W   DS         V LGGGHYAPR   L  +EG ++GHMLA+YAL F          GG WR ++T A+ ST+ AFP       G +   +DKKAFK  +R  + E+L E+ +
Sbjct:    7 TLIIVSGGDIASTNQADFLLQKFDWK------VIAKVEGLDAYSYQ--DIRMWIHPGGVLFEDDLDLRW----QKETGERVI-----------EAIFPSRHSAKSGNPSLTLHPIGVPQLDYDAIPPYGGKSGDAPPPSPRLASWWRNMLESVSGTEIESEFDLSLEVTHHGPWISVPSIFVEVGSTDKTWGHKGAAEILADLIAKGLGMNGNN-EYGKW---DSELNHGETVVVTLGGGHYAPRANKLGAVEGIWIGHMLATYALPFTAPELDGEKPGGNWRNSLTSAINSTKNAFP------NGNIVCSMDKKAFKGWQRQAIREYLQELQI 307
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A2E6HJE8_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6HJE8_9EURY)

HSP 1 Score: 220 bits (560), Expect = 1.520e-62
Identity = 135/339 (39.82%), Postives = 182/339 (53.69%), Query Frame = 2 
Query:  539 LLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPLSDVVFLSRHVAKSGVPSLCVHPIGVPDPSSSRDA--GGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGK--------------GGRWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTEIGV 1507
            L++ S  D AS     ALL   DW D   G EV   +     TH+ +   +W +   LL  DH+D RW     EK               + +V+F SRH A SG PSL VHP+G+P      +   GGKP  CPPP+PRLA   RE+R+    + L   F  TLEVTHHGPWLETP++F+EIGS+ E W R+DAA++ A+++ + LGLDG       W          +VA VG+GGGHYAP  G LA  EG +LGHM+  ++L   K               G WR+A+  A+ STR AFP      +G + A +D+K+FK  +R  +  HL +IG+
Sbjct:   17 LIIVSIPDIASLIQGEALLDLGDWQD---GMEVEGCS-----THSFSDARIWWLDSGLLWEDHLDSRWTSATGEK---------------VCEVIFPSRHSAASGQPSLTVHPVGIPHIGEEDEIPFGGKPASCPPPNPRLASWYREIRKCGSSSELSDEFSFTLEVTHHGPWLETPSLFIEIGSTPEHWPRRDAAKILAEIIWQGLGLDGGD-GIGTW----DQHNPCKVA-VGIGGGHYAPFIGRLAAHEGIWLGHMVGGHSLPMDKPDDESWDPLTGELPAGNWRQAINSAIESTRLAFP------KGEIWAYMDRKSFKGWQRQSIKRHLQDIGI 320
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A842PJE0_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842PJE0_9EURY)

HSP 1 Score: 217 bits (553), Expect = 1.280e-61
Identity = 133/329 (40.43%), Postives = 181/329 (55.02%), Query Frame = 2 
Query:  536 TLLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPLSDVVFLSRHVAKSGVPSLCVHPIGVPDPS---SSRDAGGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGKG--------------GRWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAER 1471
            TLL+ S+ D AS    +ALLAR  W      TEV  +  G++W H R PV +W    R+L  D+++ R++      DG             + +V+FLSRH A SG+PSL +H IGVP  S    + + GG  G    P+PR A   R + +A  E GL   FD+T+E THHGP L  P MF+EIGSSE  W R+DAAE WADV++  LGLDGS+    +W  L S  + D    +G+GGGHYAPR  D+ R    + GH LA YAL+  +               G+W+ ++  A+ ST+ AFPG      G V A +D+K+FK  +R
Sbjct:    3 TLLIVSEPDIASTIQGDALLARGGW------TEVTTVENGRSWAHDRKPVHLWWFPDRVLMEDNLENRYS------DGSGA---------NVKEVIFLSRHFAASGLPSLTLHVIGVPGESPVGETAEFGGIKGEVVLPNPRFAEWYRRMHQAGIEHGLIPEFDMTIETTHHGPSLSVPTMFIEIGSSETHWDRRDAAEAWADVISEGLGLDGSN-GLGDWENLSSEQKGDAKVMLGIGGGHYAPRHTDVIRKTNCWAGHQLALYALEMTRPEDEDWDPITGVLPTGQWQHSIEVALESTKQAFPG------GQVIAHLDRKSFKGWQR 303
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A2E1L9I5_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=unclassified Euryarchaeota TaxID=115531 RepID=A0A2E1L9I5_9EURY)

HSP 1 Score: 217 bits (552), Expect = 1.740e-61
Identity = 130/335 (38.81%), Postives = 186/335 (55.52%), Query Frame = 2 
Query:  539 LLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPLSDVVFLSRHVAKSGVPSLCVHPIGVP--DPSSSRDAGGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQE--NWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGK--------GGRWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTEIGV 1507
            L++ S  D AS    + LL + DW      T +  + G  A+++    + MW   G +L  D +D RW +    + GE V+           + +F SRH AKSG PSL +HPIGVP  D       GGK G+ PPPSPRLA   R++      + +ES FD++LEVTHHGPW+  P++FVE+GS+ + WG + AAE+ AD++ + LG+   S ++E  NW   D+   A     V LGGGHYAPR   L  ++G ++GHMLA+YAL F K        GG W+ ++   + ST+ AFP       G +   +DKKAFK  +R  + E+L EI +
Sbjct:   10 LIIVSGGDIASTNQADFLLEKFDW------TRIEKVEGLDAYSYQN--IRMWIHPGGVLHEDDLDLRWLK----ETGERVV-----------EAIFPSRHSAKSGNPSLTLHPIGVPQLDFDEVPPYGGKSGNAPPPSPRLASWWRQMVELVSGSEIESEFDLSLEVTHHGPWISVPSIFVEVGSTAKTWGHKGAAEILADLIAKGLGM---SDNEEIGNW---DTKLNAGDTVVVTLGGGHYAPRANKLGAVDGLWIGHMLATYALPFIKPEVEGEQPGGNWKNSINSVINSTKQAFP------NGNIVCSMDKKAFKGWQRQAIREYLEEINI 309
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A432HW31_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Archaea TaxID=2157 RepID=A0A432HW31_9ARCH)

HSP 1 Score: 216 bits (551), Expect = 2.660e-61
Identity = 132/341 (38.71%), Postives = 176/341 (51.61%), Query Frame = 2 
Query:  536 TLLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPLSDVVFLSRHVAKSGVPSLCVHPIGVPDPS---SSRDAGGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGKG--------------GRWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTEIGV 1507
            TLL+ S +D AS    +ALL R  W       E   +  G+ W H   PV +W    R+L  D +D R+A       G  V            +V+FLSRH A SG PSL +H IGVP  S    S + GG  G   PP+PR A   R + +A  +  +   FD+T+E THHGP L +P MF+EIGSSE  WGR DAAE WADV++  LGLDG  P   +W  L  + RA     +G+GGGHYAPR  D+ R    + GH +ASYAL+  +               G+W  A+     STR +FPG      G V A +D+K+FK  +R  ++    E+ +
Sbjct:    5 TLLIVSAEDIASTVQGDALLGRGGW------NEADPVEEGRTWRHTSQPVHIWWFPERVLWADQLDERYAAA----SGAQV-----------REVIFLSRHSAASGRPSLTLHVIGVPGESPVGESAEYGGIKGAVVPPNPRFAAWYRRMVQAAHDHAVTDEFDLTIETTHHGPSLSSPTMFIEIGSSESHWGRTDAAEAWADVISEGLGLDGG-PGLGDWHALSDSERAQSKVMLGIGGGHYAPRHIDVLRRTNCWAGHQIASYALEMQRPEDESWDPQTGDLPEGQWEHAIRVCAESTRQSFPG------GEVMAHLDRKSFKGWQRRAVIRLCEELDI 317
[Close]
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Match: A0A6V8EB99_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=5 Tax=Archaea TaxID=2157 RepID=A0A6V8EB99_9ARCH)

HSP 1 Score: 215 bits (547), Expect = 8.740e-61
Identity = 129/331 (38.97%), Postives = 182/331 (54.98%), Query Frame = 2 
Query:  536 TLLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGDMAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQRRLHPLSDVVFLSRHVAKSGVPSLCVHPIGVPDPSSSRDA--GGKPGHCPPPSPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSEEQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLGGGHYAPRCGDLARIEGRYLGHMLASYALDFGK--------GGRWREAVTEAVRSTRAAFPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTE 1498
            +L+  +  D AS      LL R  W  KS+G   G  A      +    V MW     +L  D++D+RW+     +  E+V            +V+F SRH A SG PSL +HPIGVP  +       GG+ G  PPPS RLA   + L   T++A +   F++TLEVTHHGPWL+ PAMF+EIGS+E  W  +DAA++  D+++  + LDG S    N    DS   AD +  V LGGGHYAPR   LA ++G +LGHMLA+YAL F K        GG W++A+  A+ +T+ AFP       G +   +DKKAF+  +R  + ++L++
Sbjct:    7 SLIAINAGDVASLNQGEYLLKRFSW--KSIGLVEGKPA------YQLNDVRMWIFEDGILFEDNIDKRWSN----QTTEIV-----------REVIFPSRHSAASGKPSLTLHPIGVPQLAKDEQPKFGGRAGFSPPPSTRLASWWKMLHSHTKDATVAEKFELTLEVTHHGPWLDVPAMFIEIGSTERDWPNRDAAKLLGDIISEGMALDGGS----NIGLWDSVNNADELVLVTLGGGHYAPRANKLALVDGVWLGHMLATYALPFVKPENDTEPPGGTWQQAIDSAISATKQAFP------NGKIICSMDKKAFRGWQRQAIRDYLSQ 304
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4146.10658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXL5_9PHAE6.280e-15770.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBU1_ECTSI1.020e-14969.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C895_9STRA4.700e-8040.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D3I1_9STRA3.420e-6440.80Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2D9NJE9_9EURY1.130e-6238.92D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Euryarchaeot... [more]
A0A2E6HJE8_9EURY1.520e-6239.82D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeot... [more]
A0A842PJE0_9EURY1.280e-6140.43D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeot... [more]
A0A2E1L9I5_9EURY1.740e-6138.81D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=unclassified... [more]
A0A432HW31_9ARCH2.660e-6138.71D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Archaea TaxI... [more]
A0A6V8EB99_9ARCH8.740e-6138.97D-tyrosyl-tRNA(Tyr) deacylase n=5 Tax=Archaea TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4146contigH-paniculata_contig4146:3623..12814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score444.9
Seed ortholog evalue4e-122
Seed eggNOG ortholog2880.D8LBU1
KEGG koko:K09716
Hectar predicted targeting categoryother localisation
GOsGO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051499,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360
EggNOG free text desc.D-amino acid catabolic process
EggNOG OGs2QRIE@2759,COG1650@1
Ec32 ortholog descriptionD-aminoacyl-tRNA deacylase
Ec32 orthologEc-27_002710.1
EC3.1.1.96
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons5
Model size1951
Cds size1194
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930263.7910328-UTR-H-paniculata_contig4146:3622..39261622930263.7910328-UTR-H-paniculata_contig4146:3622..3926Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4146 3623..3926 +
1691481216.0308146-UTR-H-paniculata_contig4146:3622..39261691481216.0308146-UTR-H-paniculata_contig4146:3622..3926Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4146 3623..3926 +
1622930263.8093367-UTR-H-paniculata_contig4146:4120..41591622930263.8093367-UTR-H-paniculata_contig4146:4120..4159Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4146 4121..4159 +
1691481216.0438378-UTR-H-paniculata_contig4146:4120..41591691481216.0438378-UTR-H-paniculata_contig4146:4120..4159Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4146 4121..4159 +
1622930263.946539-UTR-H-paniculata_contig4146:12400..128141622930263.946539-UTR-H-paniculata_contig4146:12400..12814Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4146 12401..12814 +
1691481216.1005344-UTR-H-paniculata_contig4146:12400..128141691481216.1005344-UTR-H-paniculata_contig4146:12400..12814Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4146 12401..12814 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930263.8274448-CDS-H-paniculata_contig4146:4159..47081622930263.8274448-CDS-H-paniculata_contig4146:4159..4708Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4146 4160..4708 +
1691481216.0621662-CDS-H-paniculata_contig4146:4159..47081691481216.0621662-CDS-H-paniculata_contig4146:4159..4708Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4146 4160..4708 +
1622930263.8550925-CDS-H-paniculata_contig4146:10958..111331622930263.8550925-CDS-H-paniculata_contig4146:10958..11133Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4146 10959..11133 +
1691481216.072715-CDS-H-paniculata_contig4146:10958..111331691481216.072715-CDS-H-paniculata_contig4146:10958..11133Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4146 10959..11133 +
1622930263.8722315-CDS-H-paniculata_contig4146:11512..115911622930263.8722315-CDS-H-paniculata_contig4146:11512..11591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4146 11513..11591 +
1691481216.0815666-CDS-H-paniculata_contig4146:11512..115911691481216.0815666-CDS-H-paniculata_contig4146:11512..11591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4146 11513..11591 +
1622930263.8997939-CDS-H-paniculata_contig4146:12009..124001622930263.8997939-CDS-H-paniculata_contig4146:12009..12400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4146 12010..12400 +
1691481216.0910797-CDS-H-paniculata_contig4146:12009..124001691481216.0910797-CDS-H-paniculata_contig4146:12009..12400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4146 12010..12400 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4146.10658.1prot_H-paniculata_contig4146.10658.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4146 4160..12400 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4146.10658.1

>prot_H-paniculata_contig4146.10658.1 ID=prot_H-paniculata_contig4146.10658.1|Name=mRNA_H-paniculata_contig4146.10658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=398bp
MRALFIHNIGGFMAAGLLHRPRCLFPAISYVNNRSLKTHARCVVSGDHRY
QTTTTEDDGGKPHQTLLVGSQQDAASRGIMNALLAREDWLDKSVGTEVGD
MAGGKAWTHARAPVSMWSVAGRLLDLDHVDRRWAQLREEKDGEVVLKQQQ
RRLHPLSDVVFLSRHVAKSGVPSLCVHPIGVPDPSSSRDAGGKPGHCPPP
SPRLAGCLRELRRATREAGLESSFDVTLEVTHHGPWLETPAMFVEIGSSE
EQWGRQDAAEVWADVLTRILGLDGSSPSQENWACLDSAARADRVAYVGLG
GGHYAPRCGDLARIEGRYLGHMLASYALDFGKGGRWREAVTEAVRSTRAA
FPGACGGVEGGVTALVDKKAFKSAERSLLLEHLTEIGVEHKFKSSEC*
back to top

mRNA from alignment at H-paniculata_contig4146:3623..12814+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4146.10658.1 ID=mRNA_H-paniculata_contig4146.10658.1|Name=mRNA_H-paniculata_contig4146.10658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9192bp|location=Sequence derived from alignment at H-paniculata_contig4146:3623..12814+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCGAATTGTAGCTGCTTAAGGCTGGGGCTATCCCCAAGAAAAATTGGAG
TGACTGTCGCAGGCTGTAAGCAGCTACAATACTTCGTCTCTATTGACACA
TGTAATAGACAGTACAGTGACAACCGTCGCGTCAGTTAGTACTGTGGCCA
TTGTACAAGACGGAAACAGTATACAGTTCAACAGTCAGTCCTCGATCACC
TTTCGAGAATTTGTTTTACCCAGTTTCTGAACTTTACAGGCTTACCGAAG
TCGGTAGAAGACGCCGACTTGCGGCTCCAGCTCTTGGGGAAAAAACGTGC
GAGTGGCTTTGCGGTCACCCCAGGAGCCATACCGCTGTCTCCACCGATGG
TGAGGGTGTCGACACGCTCGGAAAAGGCGAGTTGTCGAAAAGTGGATGTG
CTTTTTTTATGGAGAACGCCTTCGCCCTTAAAATAGGGGGTCATTCCAGT
CAGTACATGCAACATGGAAAATTAAGGGTGTAAGCTACTTGTGTATGCTC
TGTAATCCATGTAGTTTAGTGCAGGTTGGAGCAAGAGATGCGAGCACTAT
TCATACACAACATCGGTGGCTTCATGGCCGCTGGTCTTCTTCATAGACCG
CGTTGCTTATTTCCCGCTATCAGTTATGTCAACAACAGGAGCTTGAAAAC
ACACGCAAGGTGTGTCGTATCTGGTGATCACCGCTACCAGACCACAACAA
CAGAAGATGACGGCGGCAAGCCTCATCAGACTCTCCTTGTTGGATCTCAG
CAGGATGCAGCCTCCCGCGGCATAATGAACGCGCTTTTGGCTAGGGAGGA
CTGGTTGGATAAGAGTGTTGGTACAGAGGTCGGCGATATGGCGGGTGGCA
AGGCTTGGACACACGCTAGAGCGCCGGTGTCAATGTGGTCAGTAGCAGGA
AGGCTGCTGGATCTGGACCACGTGGATCGAAGATGGGCGCAGTTGAGGGA
AGAAAAGGATGGCGAGGTGGTTCTCAAACAGCAACAGCGGCGGCTGCATC
CGCTATCGGATGTTGTGTTCCTCAGCAGGCATGTTGCGAAGTCTGGTGTT
CCATCTCTCTGTGTACATCCTATCGGGGTGCCTGATGTGAGTGGGATCGA
TTACTCAACCAGCGCTCTCGCTGTACGAATACAACTGTAAGTCAAGGATT
GAAATATTGAGTCATTAATCTTAACTCAAGAGGTAGAGTTTGATCAACGC
GTGCCATAAAACTACACACCGATTGTACTGTCAAGCAAGAGCCGACCTCC
GACCCTTCTTTTCGACAAGATACTAAACGGACCATTCGAATCTAGGTGGA
CTCCTGCTGTGATGTGATACGATACTAGATTAGGTTGGCCATTGTGGCAA
GACTTGTTCCAGAACAAATTTTACTCATGATCCAGTCACGATTAGAATTT
AATTATACAAGTACATGACAACTGGGTCTTCTGAGATGCGCCGTTTTTAT
TATTATTATACTGTATCGATCTTAAGAAGTTCCACGCCTGCGAGCGATGA
CAACAAACCTGAGCTGCTGTTTCGGAATATTTTATCGCCGCTATACCACA
ACACCGTCAGCCAAACATCCATGAAATGGCGGAAGTCTGTTATTCTCTTC
TTCCAGAATGTTGCCTCCATTTCGATAAATAAGGGAATTTGTTCTGATCG
GCCACTATCGCCCAGAAGTCTTTCGCCAGTGCTCATTTGATTTGTTTCTA
ACACCCCCGCGAAAAATAAGACACAATGATAAAACCAGTAAAGGAGTCTT
ACGAAGCTGTGGAAGGAGAGAACCGCATAGATACTGCTAAACAGCGATGT
AGAAGATACACGGAGTCCTGAAAGAACCCTGCATTATTCCATTGATTCCA
GCGCACAACCAGCTCGCTTTTCACCCGTGTTGCAGACTTCATGAAAATCC
AATTCTGGAAAAAAAAATATAACTGGGAAAAAGTTTTGGAAGCACATTAC
GATAGACCATATTTTATGGCAGCACGGATCTGGGAATCAAATCCGTTCGG
TCGAAATCCGGCGGTTTTATGGGAACGTGTTTGGAGAGATCCGTGAAGTT
GAGATCTGTATTCGTTTCTGCTCCGAAATATCACATGAATCTGAGCACCA
GATCCGTGCTGGTCTGGGCTTCGCGTATTTCAGCGTTCTGGTCGTTATAG
AGGCGTTGGTGTCCTAACCTGGGCTGTTGCAAGAGAGGCGGCAAATTTAG
TTTGGGTGCATATATGCTCACAGTGCAAGGATAGAGGGGGTAGGCTAATG
AGACCATGATGTTGTGACAGTGCGGTCGTTCTCTAAAAGCTGCTAGTTTT
TTCGTAGAAGGCGTCGTAGTGGTCTACGTGTCCAAATAGCAATGCAATAC
AACGCTTGGTGGCCCAGCAAGGGTCCAACCATATTCAGCTCCCACTGTTG
TTTTTTTCTGCTGTTGCCAAAGCAATCGCCATTTTCATTTTTCACTCTTG
CGTCTAGCTCCCGATACCGTCGGGGCTGAAGGTAGATCCCCGAGAGACAA
ATATTGCCGTGACCGGGGCTTTCCAGACAACGTTGGCGCGGTCGGCGCGT
CGCTGTGGTTGTCGAGATACCTACCCCTGTTTGGTGGCACCACAACTGGA
GCAACTGCGAAAAACTGCTAACGATGGACCTATTGCACTTGCTGTAGTGT
ACTCTGATGTGCTACTACTGCAGACAGTCGCTATAATTTCTATTTTCCCT
TTCTATTATTTGTGCGCCTAGCGGCCGATACCGTCAGGGCTGGGAGTAGA
TCCGTGAGAGACGAATGCTGCCGGTGATCAGCGCTTTCCAGTAAAAGTTG
GTGGGCTCGACGTGTCGTTGCCGTTGTCGAGCTATGCAACAGTGTTTGAT
GACACAACAAGACAAGTATATCCTCTGTTCCCGTCAAAAATGGACCAATC
AACCCATCTGACAGACCCTGGGAAAGTCTAATATTTGTCATAAAATTGCC
CGTACGGATTTCCCTGTCTCGAATCTGCGCATCTCGTATTTGCTCAGATT
CGTGTCTCATTGATCCAGATCCGTCCCATAAAAAATGACCTTACTGCTCA
TATTTTGGATACAAAAAACGCTGTTTTCGTCGTCAAAGATCACACATTGC
TTATCCAATATTCTAGGGTTATTGCGTGTGTTAAGAGCGCGCTTACTCCC
ATCCAGCCAGCCAGGCAGCATCGATTTTCGATTTTTTTTTAGGGGTAGCG
CCAACCTTGGATGGTCAGGAGCATGACATATGCCATGGTTACCGATGGAC
AACGACGCAGTGTGTAGTACAATCGTACCTCCTTATCGTGTTCGAGTCGT
GTTGCTCAGCGCTACCGTGCAGCAGTACAGCCAGTCAGTACACACCACAG
TACAGCAACATTGTACAGCACAGTCAGTGTGGTACAGACGGTCGGTGACT
TGGAAGTAACCAACCTGAGACGGTAATAGCGAGATCTTGGGCCAAGTTAT
CGAGCGGCACAGGTTGTGCCCGCATGCATTCGCCCAGCTCCTCCGTCACT
GCCTACCTCTGGAGTTTGGGGCGGTTTGACACCCAAATACTGCCAAACAT
CTAGAAACGATACAAAAAATCGATAGTTTCATTACGGTGCCTCGGTCTCA
GAGTGACCATATCTGAGTTTTTAAAAACCAAAATGCCACGAGGAAAAGTA
CTCAGTCAAAAAATGCCAAAAAATTGCCCATTTTTTTCCGAGGTCAATCG
GAAAAAGTCCGGAAAGAGTGCCTTTTCTCGGCTCAGTACATCTTGTCATG
GCGCATGTTGTGGTGTTAAAAGTCAATTGTTTGGCCCAAAAATTTGGGTT
TCAACCCAAAAAAACATGTAGAATCCCTTCTTTTTTTTAACGGAGATGTC
AAAGTGCCTCTTTACTCATATTATGAGACAAAGGAAGTACAACTTGTAGG
CGATACAAGTATTGTACTATGAACCAGAAGAAAGATTCGTCCTGCTCGAG
GGGAAGCGTCCAAACTCTCGTGCGTCCCTCAAGCGAGGACGGTTGTACGA
GCGTTGTGTAAGTTTTCGGACGCTCGAAAAGGCTCGTGATTCTGTGCAGA
TCGCACGGAAGTCCGTCACCAAACTCTTCATCAATTGCTGCATACGACTT
ACTTGGGTTGAGTAGAAGGACAACAAGAATGCTCGGGAGATAATGATGTC
ACGGGATAGGTACACAAGTTCAAAGCGCCACCAGATCGCGAGGCTCAGCG
CCAACGAGTCAGTAATTCGAGTTCCAGGCTTTGGCACTCGAACAGACTGT
CAGTCTCACGTGTGCGCGCACTTTATTTTATTTTTCGCTTGATTTTAACT
GTAAACCGAGTCCCTTCCTGTCAAACGTATACTGTCTGTGCCGTACGATA
CACGGTACAGGTTGGATGACAAGCTACGTTGATGCATTTAGCTGTATTTT
TCTATACAATTGTTAGCTATTTGTGTCACGTCCGCTGAAACACCAAGCAC
AAAATGTGTTGTCCTAAATTTTTGTGCACCGCGATGATGCCACGTACGTT
TTAACCCGAGTGTTTTTTCGAAACCTTTTTGCTCAAGAATGTTCCTGGCC
CTGAGCCTGAGCCTGAGCTAAAAAAGTGCTCTTTGCTGAAACTGCATACT
TGAATTTTTCTCGCTCGATATTCAGCTTCAGTCAACAAGCGAGGGATCGA
ATTGCGTAAAAAACATATAGCTCAAACGTACTAATTTGGAGTCGAGTTAC
GCCGTACTCTTCGATGTTTTATTGTTTGTGAAAGGTCTACAAGCAGATGT
AGAACTGTATTTTCTTTCTTTCTTTCTTTTTTTCGGGAGTATCAGGAGTA
GTTGTGTATTAGAAAAATGTAAGTATTATGAACGTTTATTTTCGAGAATC
CAAATAGGAAATGGTGCATTTTTATCGGGCGGGTGCGCGCTGCGATCATG
CTTGAAGGAATCGAACTCGAAATAAAAGTTTTGAGCTGGAGGTATGTCGC
TGTGTTATATGATATTCCAGCGTACAGTTGCCCATCTTGGAGTGTTCATA
TCTAGCCGAGGGGTTCGAATCAGAGTTTGTTTTCATTCCCGAGACTAATA
CGGTCACCTAAAATGGTTTAGACATAAAAATTGTTCAAGTGTTCGCCGGA
AGATTTAGCATGAGCATGTTTATTCTATGTTTCCATGTGCTCAGGATCAT
CTAGGACGGCTCCCAATCATGGTGAACAATTGTGTTATATTATGTGCCCG
CTCAATTCTAACGATTTTTTAAAAAACTTTCGTTTACACCATGTGACATA
TTCGTAGTCGTGCGGTGGGGGGGGGTGGACTTTTTCGGAGTTCGCCACAG
TGCAGTTCCATTACCACTATTTTGGTATTAAAAACCTGCTGGTGATGGAG
ATGCACTGAATGATTTTGGAGTTTATACCGTTTCGTAAAATTTCAGGGGT
CCTCTCGGTACCATTACCGGATAGGAAAATATCTAGAAAAACGACAGATA
GCAAGAATATCCTCAAGTGAAATTCCCTCTACCGCGGTAAATTACCACGC
CGATAATTCACGTATAAACACGGTAATTTATTTTGAGATCAGGATGTTAT
ACCGCCGCGATTTTTCCCGGCGGAATATCTCTTTGTCGTGGAATCTTCGA
AAATACAACATTGTCAGCTATACTCTTGTGGGCGTTTCAACAATTCTCCA
CGGTATTCCATAATTTGATCGACGTAAACCCTGGTGAATTTCGATTTGGT
CCTGTATGGCTCATACTTACCTGCAGGTTCCGGACCCCAGTCCATCTGCA
CCAACGTCTCGCTACAAAATGAAATCATTTCCACAACCCGTCGGACGCCA
TAAGCTCCCAAAGCTTTTGAAGTTTGACAAGGAATTCGGGGTTTTTTTCG
CGATGTTGGTGCATGTGAGCTGGGGTTCGGGACCTGGAGCTTCCTATTCA
TTAGCGAGACAGTAATTCCCGGATCGAATTATGCCAACATATTATTTATT
TTCGGAAGCACTCTACTGCGAGGTACCGTGTATTTTTTCGGTTGTCATAC
TGGAGATATACTCAGTATATTTGGGGTTTATAGTGACTGTACTGAGTTAT
GCCAGTATTCAGCGAGCAAATACACGAGATAGACTCAATATTTAGAGGGT
ATATACTGGCAAAACTGGTAATATACCCCCCAGTATTTTGGCTCGACTCC
GAAATGATACTTTGCATATACTCTGGTACTATAAACTGGAAAATCTGGCA
GCAAACCAGTATTTAGGCTCTCAACTTAAGAAAAACAGTAGTCCAGAGTG
CATATTTGTACGATTTGTGACAACCGCGTTACACCAATATTTTCGCAATA
ATTTACTGGGTAAGTACGCAGTATTTAATTGGATACATACTGGTTCCACT
GGCGTATACCCAGTAATTTTCGAAGTTTATACTACGCTGCTAAGTCATTT
CGATTTTTTGCCAGGAGATGCCTTGGGTATTTTTGGGGATCGAATTGGTA
ATACCGGAGGTATGCTCATTTTGGGGGGGGGTTATACTGGCGATACATGA
TTATCCCCGTATAGTCGTCAGGATGTACCGGAGATCTTCCCAGTATTTTG
GAAAATGATACTGGCGATACTTAAGATTACTCAGTATTTTCGATGAGGGC
CCCAACTGGTACTAAGTATGTGCTCTGGCACTAGATACTGTCAGTGCGTC
CCCAGTAACCAGTATACGTACTGTACTGTCTGTCGAGCTTCGTATACCGA
TAACCATGCGTGGGCGTTCGTCACTAATAAACTCCGAAGCAGTTTTGGCC
TGTATTCTGACTAGGGATTATGTCGGTCATACACGGCCGGGTGCCATAAG
GATTAAAGCAAGCGTCAAGTCCCAGGGTTCCCAACGTGAGTGGTATTGAA
ACCTGGTTCTCAGAAACTGTTTCTAGAAAAAACGACAGTACAGGGGATAA
TACGGGCTTTGCGTGCTCCATTTAATTCTTTCGCCACGAGCGCAGCTCTT
GGTGGTCGAAAGAAAGGCCTGCATCGTCGGAGAGCTGAAATCCCCACTTT
TACGTCGAAACTGGTTACTCTGTGGGGGCTTTCGTGTGCGTCTGACGATA
TTTTTCCAAACGTATCGTTCAAACAACGTTGTGAACTCCGGAATAATGGT
ACTGAATTGAAGTGTTCGGGGATTTTACAGTTACTTATTGGGGCTCACTG
CAAAAGGCCAAAGCACAGATAGTACGTGAACTAATTAGTCTATTAGGTAC
CCCTCTTCACCAGAGGACACGCTCCAGTAGAAGAAAGACCAAATCTTTGC
GGCACAAGTTAAGTTGCTAACAGCCGATGCCCTTGTGCCGATACCTGTTG
TTGGGGATTTTGGGTGTGGATCTACGCGGTTTGCAGCCGTCGAGCTCGAG
GGATGCAGGGGGTAAGCCTGGTCATTGCCCTCCTCCGTCACCTCGCCTGG
CGGGCTGCCTGAGGGAGCTGCGGCGCGCCACGCGAGAAGCAGGACTAGAG
AGCTCGTTCGATGTTACGCTAGAGGTTACCCACCATGGCCCTTGGTTGGA
GACACCAGCAAGTGAGACATGTGTTTCTGTGTTTGTTGCTACCGTTTCAT
AATGTCCCGATATCTTTGTGGGCATTTTCTTGTTCATTGCCACGGGCGAC
TTATGCGCACTCACTCTTTGATGGTGTTGGAGTTGATTTGCCGTTGTCAC
CGCTGTGTACATGTCACCATACAGTACCTTCGCTCGAAGAACGCTTGGTG
ATCGGACAGGCGAGTTTATATCGGCATATTGATCGACACTTCGTCACTTG
CGTCAATCGCTCTTTCAGGCGTAGTGAGAGGAGAGACAGATGCCAAGTGC
TGTGTACGCTGTTACCCAAGTCGCATTGTGAACATCGCTCCCACGTTGAC
GACACTCTGCTTGTATTGGATTCGACGGTTGTATGCACAGTGTTCGTGGA
AATTGGGTCGAGCGAGGAGCAATGGGGAAGACAAGATGCAGCGGAGGTGT
GGGCTGACGTTTTGACGAGGTGCGCTGCATGGGCTTTGTCTAGCAACAAT
GGGAGTATCGACGTCCGGGCAACGTAGTCGCTCCAACCTCTTTACGGTGT
GCATGACATATTGTTGGCAGTCCCATATGTTGGTGGTCGTGAAGGGCTTC
TCAGGAGTAGGCCATCTCTGATGAATATTGCGCGTTACCCGCCGTTTTGG
CTGCAAAGTTGCACTTGATTACCCGCTTAGCTGTTCCTTGTAGGTTAAAC
ATTTCACTTGCTTCGTTAGGAGCGGCAACTTGACCTCATATGCTGCGCTT
GAGCTTTCATCAGCTGCTCATAGCTCGTGGTTGGGACGCGGATATCAGCA
GTTGAGTAGCAGTTACACGCACTGGAATCCCCTTTGCTAAACCATCCGGT
GGATACTCTCCGCCCGCCACGCCCGCCCCCCCCGCAGAATACTAGGGCTT
GATGGATCGTCACCGAGTCAAGAAAATTGGGCATGTTTGGACTCCGCTGC
TAGAGCAGATCGCGTAGCGTACGTCGGCCTTGGAGGGGGGCACTACGCGC
CACGATGCGGTGACCTTGCGCGCATTGAGGGGCGCTACTTGGGCCACATG
CTCGCGTCGTATGCCCTCGATTTTGGAAAAGGGGGTCGTTGGCGAGAAGC
GGTCACAGAGGCGGTGCGAAGTACTCGTGCGGCGTTCCCAGGGGCGTGCG
GAGGGGTTGAGGGCGGGGTGACAGCATTGGTCGACAAAAAGGCGTTTAAG
TCGGCTGAGAGATCTTTGCTGCTAGAGCATTTGACGGAAATTGGCGTGGA
GCACAAGTTCAAGAGTTCTGAATGCTGAAGAGAGAATTTCAATGGTACGA
GCACACGCTGTGCCTGGATTTTTTTGTTTTTTTTGTCATTCCGCATGTGC
AATTTTCGAAGAGCATTTATTTCATGCACAGCATCTTGTAAAAGACAACG
GAATAAAATCGGTCGTGTAACCAGCAATCCCGAAATTGGTTTCTTGCCGC
TTATCGGAGAAGATCGTTTAACCTGTACTTGGATCGCCAAATACTATTCA
TATTCGTGTCGTTTTGAACACACGATATACAGTTCAGCCGTGTTTTTTTC
CAGACGAACTGCGAATCTGAGAAGCGTGAGGTCGTGATTTTCATGGGGAT
TCGGTTGTGTACCTGGTTCACAAACACGATACACAGATGACGAGACGAGG
AACACACTTGCTCCGAAATGCTGTCGCCCAACTGATGCCTTC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4146:3623..12814+

>mRNA_H-paniculata_contig4146.10658.1 ID=mRNA_H-paniculata_contig4146.10658.1|Name=mRNA_H-paniculata_contig4146.10658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2388bp|location=Sequence derived from alignment at H-paniculata_contig4146:3623..12814+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGAGCACTATTCATACACAACATCGGTGGCTTCATGGCCGCTGGTCT
TCTTCATAGACCGCGTTGCTTATTTCCCGCTATCAGTTATGTCAACAACA
GGAGCTTGAAAACACACGCAAGGTGTGTCGTATCTGGTGATCACCGCTAC
CAGACCACAACAACAGAAGATGACGGCGGCAAGCCTCATCAGACTCTCCT
TGTTGGATCTCAGCAGGATGCAGCCTCCCGCGGCATAATGAACGCGCTTT
TGGCTAGGGAGGACTGGTTGGATAAGAGTGTTGGTACAGAGGTCGGCGAT
ATGGCGGGTGGCAAGGCTTGGACACACGCTAGAGCGCCGGTGTCAATGTG
GTCAGTAGCAGGAAGGCTGCTGGATCTGGACCACGTGGATCGAAGATGGG
CGCAGTTGAGGGAAGAAAAGGATGGCGAGGTGGTTCTCAAACAGCAACAG
CGGCGGCTGCATCCGCTATCGGATGTTGTGTTCCTCAGCAGGCATGTTGC
GAAGTCTGGTGTTCCATCTCTCTGTGTACATCCTATCGGGGTGCCTGATA
TGCGAGCACTATTCATACACAACATCGGTGGCTTCATGGCCGCTGGTCTT
CTTCATAGACCGCGTTGCTTATTTCCCGCTATCAGTTATGTCAACAACAG
GAGCTTGAAAACACACGCAAGGTGTGTCGTATCTGGTGATCACCGCTACC
AGACCACAACAACAGAAGATGACGGCGGCAAGCCTCATCAGACTCTCCTT
GTTGGATCTCAGCAGGATGCAGCCTCCCGCGGCATAATGAACGCGCTTTT
GGCTAGGGAGGACTGGTTGGATAAGAGTGTTGGTACAGAGGTCGGCGATA
TGGCGGGTGGCAAGGCTTGGACACACGCTAGAGCGCCGGTGTCAATGTGG
TCAGTAGCAGGAAGGCTGCTGGATCTGGACCACGTGGATCGAAGATGGGC
GCAGTTGAGGGAAGAAAAGGATGGCGAGGTGGTTCTCAAACAGCAACAGC
GGCGGCTGCATCCGCTATCGGATGTTGTGTTCCTCAGCAGGCATGTTGCG
AAGTCTGGTGTTCCATCTCTCTGTGTACATCCTATCGGGGTGCCTGATCC
GTCGAGCTCGAGGGATGCAGGGGGTAAGCCTGGTCATTGCCCTCCTCCGT
CACCTCGCCTGGCGGGCTGCCTGAGGGAGCTGCGGCGCGCCACGCGAGAA
GCAGGACTAGAGAGCTCGTTCGATGTTACGCTAGAGGTTACCCACCATGG
CCCTTGGTTGGAGACACCAGCAACCGTCGAGCTCGAGGGATGCAGGGGGT
AAGCCTGGTCATTGCCCTCCTCCGTCACCTCGCCTGGCGGGCTGCCTGAG
GGAGCTGCGGCGCGCCACGCGAGAAGCAGGACTAGAGAGCTCGTTCGATG
TTACGCTAGAGGTTACCCACCATGGCCCTTGGTTGGAGACACCAGCAATG
TTCGTGGAAATTGGGTCGAGCGAGGAGCAATGGGGAAGACAAGATGCAGC
GGAGGTGTGGGCTGACGTTTTGACGAGTGTTCGTGGAAATTGGGTCGAGC
GAGGAGCAATGGGGAAGACAAGATGCAGCGGAGGTGTGGGCTGACGTTTT
GACGAGAATACTAGGGCTTGATGGATCGTCACCGAGTCAAGAAAATTGGG
CATGTTTGGACTCCGCTGCTAGAGCAGATCGCGTAGCGTACGTCGGCCTT
GGAGGGGGGCACTACGCGCCACGATGCGGTGACCTTGCGCGCATTGAGGG
GCGCTACTTGGGCCACATGCTCGCGTCGTATGCCCTCGATTTTGGAAAAG
GGGGTCGTTGGCGAGAAGCGGTCACAGAGGCGGTGCGAAGTACTCGTGCG
GCGTTCCCAGGGGCGTGCGGAGGGGTTGAGGGCGGGGTGACAGCATTGGT
CGACAAAAAGGCGTTTAAGTCGGCTGAGAGATCTTTGCTGCTAGAGCATT
TGACGGAAATTGGCGTGGAGCACAAGTTCAAGAGTTCTGAATGCTGAAAT
ACTAGGGCTTGATGGATCGTCACCGAGTCAAGAAAATTGGGCATGTTTGG
ACTCCGCTGCTAGAGCAGATCGCGTAGCGTACGTCGGCCTTGGAGGGGGG
CACTACGCGCCACGATGCGGTGACCTTGCGCGCATTGAGGGGCGCTACTT
GGGCCACATGCTCGCGTCGTATGCCCTCGATTTTGGAAAAGGGGGTCGTT
GGCGAGAAGCGGTCACAGAGGCGGTGCGAAGTACTCGTGCGGCGTTCCCA
GGGGCGTGCGGAGGGGTTGAGGGCGGGGTGACAGCATTGGTCGACAAAAA
GGCGTTTAAGTCGGCTGAGAGATCTTTGCTGCTAGAGCATTTGACGGAAA
TTGGCGTGGAGCACAAGTTCAAGAGTTCTGAATGCTGA
back to top