mRNA_H-paniculata_contig4140.10647.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4140.10647.1
Unique NamemRNA_H-paniculata_contig4140.10647.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: D8LC01_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC01_ECTSI)

HSP 1 Score: 603 bits (1555), Expect = 2.160e-204
Identity = 292/422 (69.19%), Postives = 353/422 (83.65%), Query Frame = 1 
Query:  109 ELLGPTLVNNEGENVPSSS-LSGKVVALYFSASWCGPCRGYTPILVSTYKAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLDQDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFMTKNG-LKGKETIAGKTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLGVRGIPALATVGLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESG-QTSIIFFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQLTRG 1365
            ELLGP+L ++   +VP+++ L GKVVA YFSASWCGPCRG+TP LV TY AV+AAGK FEVVLIGSDR + DF  YHKEMPWLALPF +RE+KSSLS KFRVRGIP LV++DQDGS+IT DGRE VG DPEGK+FPW+PKPL+EL+GTEF+TK G L G+E + GKTLALYFSAHWCPPCRAFTPRL++TY+ +K R G +DV+F+FVSSDK+Q+ FD+Y+ EMPWA+IPF D  RRRALA RLGVRGIP L T+  DGV+INQTAK AA+ D KGLEFPWWPK +EDL+V+SQSNGFH+QEMP+LIVFME  DD++QKE EEALLPIA AEA+ AK +G Q  +IFFT KSEA++PTQVRNVC++K V  SPQM+I+++ GNG Y++P GG SAPV A ++  FV+ YK G LER QL+RG
Sbjct:    5 ELLGPSLKDSAENDVPTAAALEGKVVAFYFSASWCGPCRGFTPQLVKTYNAVRAAGKEFEVVLIGSDRKEDDFLLYHKEMPWLALPFPDRERKSSLSTKFRVRGIPALVIMDQDGSVITPDGREVVGDDPEGKDFPWRPKPLSELIGTEFVTKPGTLAGEEVVRGKTLALYFSAHWCPPCRAFTPRLVQTYKDLKKRAGSDDVEFLFVSSDKDQAQFDDYFREMPWAAIPFGDVNRRRALATRLGVRGIPTLTTIDRDGVVINQTAKGAAIADAKGLEFPWWPKAVEDLSVNSQSNGFHVQEMPSLIVFMEACDDVDQKEVEEALLPIATAEAEAAKANGGQPVLIFFTVKSEASLPTQVRNVCDLKTVPDSPQMIIVNIQGNGAYHLPQGGISAPVNATTIRDFVEAYKSGALERFQLSRG 426
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: A0A6V1NWZ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWZ1_HETAK)

HSP 1 Score: 384 bits (985), Expect = 7.770e-120
Identity = 194/418 (46.41%), Postives = 264/418 (63.16%), Query Frame = 1 
Query:  109 ELLGPTLVNNEGENVPSSSLSGKVVALYFSASWCGPCRGYTPILVSTYKAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLDQDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFMTKNGLKGKETIAGKTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLGVRGIPALATVGLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESGQTSIIFFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQLTR 1362
            E+LG TL++ +GE    S+L GKVV LYFSA WC PC+G+TP+L   Y   +A GK FEVV + SDR +  F+ Y+ EMPWLALPF +R++K+ LS KF+VRGIP+LV+LD+DGS+IT +GR  V  D EG++FPW+PKP+ ELLG EF  K G  G+  I GKTL +YFSAHWC PCR FTP L K Y  +K + G  + + IFVS DK  S F+EYYGEMPW +IP+ D  R   L QR  V GIP L  +  DG ++N +A+     D     FPW P+P+EDL V+++  G  + E P+L++FMEG DD++Q EA  A L +A   A      G  +++FF A+    +P QVR +  +        MV++D+P +GGYY      +  +   ++  F + YK     R QL+R
Sbjct:    5 EMLGETLLSKDGEVQTDSALQGKVVGLYFSAHWCPPCKGFTPVLAEIYNGYKAKGKNFEVVFVSSDRDQGSFDGYYGEMPWLALPFSDRDRKTHLSSKFKVRGIPSLVILDEDGSLITLNGRASVQSDREGEDFPWRPKPIPELLGDEFKGKEGTVGRSVIEGKTLGIYFSAHWCGPCRGFTPTLAKVYNKLKEK-GQNNFEVIFVSGDKSDSQFEEYYGEMPWLAIPYGDK-RIDQLNQRFEVNGIPHLVILNPDGTVLNASARGKIDADENAENFPWAPEPMEDLGVTAECMGSDINEKPSLVLFMEGVDDLQQDEAWAAGLAVAREFAARGGGDGP-ALLFFGARGGGRIPPQVRRMTGLPEQEEKISMVVLDIPDSGGYYKSD---AEEINEQTVRDFAENYKT-LATRQQLSR 415
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: A0A6T2CYP1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2CYP1_9EUGL)

HSP 1 Score: 348 bits (892), Expect = 2.790e-106
Identity = 180/418 (43.06%), Postives = 262/418 (62.68%), Query Frame = 1 
Query:  112 LLGPTLVNNEGENVPSSSLSGKVVALYFSASWCGPCRGYTPILVSTY-KAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLDQDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFMTKNGLK-GKETIAGKTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLGVRGIPALATVGLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESGQTSIIFFTAKSEA-NVPTQVRNVCEMKVV-SGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQ 1353
            L G  LV+       +  L GKVV +YFSA WC PCRG+TP L   Y K++QA G   EVV + SD+T+  F +Y  EMPW ALPF +RE+K++LS+KF+V GIP+ V+LDQDGS IT DGR  V  DP G+ FPWKPKP  EL+G  F+ +N     K  I GK L LYFSAHWCPPCR FTP+L + Y+++K      + + +F SSD++QSSFD+Y+ EMPW ++P+ D  R+  L+   GV GIP+   +  DG +I    +     DP+G +FPW+PKP+++LA  +      + + P+ +V M+GAD   Q   + A+ PIA+   + AK SG+   +FFTA +EA ++ +++R++ + +   S S   V++D+   GGYY+P        + AS+ +++ +Y   +LER Q
Sbjct:    7 LFGEQLVSGTESVKTAEVLDGKVVGIYFSAHWCPPCRGFTPKLAEWYTKSLQAKG--MEVVFVSSDKTEEAFNEYFAEMPWKALPFVDRERKAALSKKFKVDGIPSFVILDQDGSTITKDGRSAVSEDPTGEEFPWKPKPFHELIGESFIGQNKAPLDKSAIDGKVLGLYFSAHWCPPCRGFTPKLAEWYKSVKETL--PEFEIVFASSDRDQSSFDDYFAEMPWIALPYEDRKRKETLSNLCGVSGIPSFVIIDKDGSIITTNGRGIPEMDPEGKQFPWYPKPVKNLAYDTDG----INDTPSFVVLMDGADKETQDAVQAAVEPIAKEYQQKAKASGEDEFLFFTADAEAADIASRIRSLIKAEESPSNSITTVLLDLGDQGGYYIPDN--LDVKSEASIREYLAKYTAKSLERQQ 414
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: A0A7S0E2L2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E2L2_9EUKA)

HSP 1 Score: 342 bits (877), Expect = 3.670e-104
Identity = 194/425 (45.65%), Postives = 268/425 (63.06%), Query Frame = 1 
Query:  112 LLGPTLVNNEGENVPSSSLSGK-VVALYFSASWCGPCRGYTPILVSTYKAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLD-QDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFMTKNG-------LKGKETIAGKTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLGVRGIPALATV-GLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESGQTSIIFFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQL 1356
            LLG TL   +GE   + +L GK  VALYFSA WC PCRG+TP L   YK + AAGK+FE+V + SDR ++ F++Y+ E PWLALP+  R+ K++LS++F+V GIP+LV+LD + G +IT DGR+ V  D +G+NFPWKP  + E +G EFM+ +G       L+G+    GK + LYFSAHWCPPC+AFTP L++TY+ +KA   G++ + +FVSSDK+   F EY+  MPW +IP  D  R+ AL+ R  V GIPAL  V G  G  IN   + A   DP+G EFPW PK + D+A  S ++G  L +   + V MEGA    Q     A+  +AEA    AK +G   + +F A++   V  QVR + ++   + +PQ+ I+D+P  GG+YV  G     V A S+A FV +YK G LER QL
Sbjct:    6 LLGETLKTKDGEVSTAEALKGKQAVALYFSAHWCPPCRGFTPKLAEAYKGLLAAGKSFEIVFVSSDREESAFDEYYGEQPWLALPYAERKLKAALSKQFKVSGIPSLVILDGETGELITKDGRDAVMEDLKGENFPWKPPTVWEAMGDEFMSGDGETVELSALRGE----GKVVGLYFSAHWCPPCKAFTPLLVETYKKVKA--AGKEFEVVFVSSDKDMGQFQEYFATMPWLAIPPGDK-RKAALSTRFEVEGIPALVLVDGATGETINAKGRGAVGGDPEGEEFPWRPKALNDMA--SGADG--LNDEACVCVMMEGAPAESQAALAAAMGVVAEA----AKAAGGEEL-YFVARAAGEVADQVRKLTKLGDAAAAPQLAILDIPDEGGFYVYEG----MVDADSIASFVAKYKAGGLERKQL 410
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: A0A7S2UY08_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY08_9STRA)

HSP 1 Score: 342 bits (876), Expect = 5.820e-104
Identity = 178/421 (42.28%), Postives = 267/421 (63.42%), Query Frame = 1 
Query:  109 ELLGPTLVNNEGENVPSSSLSGKVVALYFSASWCGPCRGYTPILVSTYKAVQAAGKA-FEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLDQDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFMTKNGLKGKETIAGKTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLGVRGIPALATVGLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESG-QTSIIFFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQLTRG 1365
            +LLG  L     + +P++ L GK+V LYFSA WC PC+ +TP L   Y    +     FEVV + SD++ A F +Y +EMPW A+PF+  + + +L  KF+ +GIP  V+LD +G M+T +GRE V  +P   +FPW P P+ ELLG+EF+   G      ++GKTL +YFSAHWCPPCR FTP+L+  Y  +K++   +D + IFVS D+EQS FDEY+GEMPW ++P++ A R + LA+ +GVRGIP+   +  D  +IN+ A+     D +G  FPW P+P+EDL+V +   G+ + ++PALIVFMEGADDM+Q+     L  IA   A+  KE G + +++FFTAK+   + +Q++++C ++        VI++ P  GG +  SGG    VTA S+  FV +++ G +  +  +RG
Sbjct:    5 DLLGSELKKGN-QTIPTAELDGKIVGLYFSAHWCPPCKMFTPQLAQWYNKFNSEKPGEFEVVFVSSDKSDAQFNEYFEEMPWCAIPFEKDDLRRALGRKFKCQGIPFFVILDSNGEMVTDNGREGVMEEPN--SFPWHPVPITELLGSEFIGAGGTTTTPDLSGKTLGIYFSAHWCPPCRGFTPKLVDFYNNMKSKR--DDFEIIFVSRDREQSQFDEYFGEMPWLAVPYTSASRDK-LAKSMGVRGIPSFQILDADRKVINKDARMRVENDLQGEGFPWPPQPLEDLSVDTTCMGYDINDVPALIVFMEGADDMDQQTLTTGLNEIATKYAEAGKEKGKEQTLLFFTAKASNRITSQIQSLCGIQP-GADVTAVIVNCP-EGGCHKWSGGDE--VTADSIKDFVAKFESGEIPVTPFSRG 415
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: A0A6T0B168_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0B168_CHRCT)

HSP 1 Score: 340 bits (873), Expect = 1.310e-103
Identity = 187/424 (44.10%), Postives = 257/424 (60.61%), Query Frame = 1 
Query:  106 AELLGPTLVNNEGENVPSSSLSGKVVALYFSASWCGPCRGYTPILVSTYKAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLDQDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFMTKNGLKGKET---IAGKTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMP--WASIPFSDAVRRRALAQRLGVRGIPALATVGL-DGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESGQTSIIFFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQLT 1359
            +ELLG +L +  GE     +L GK+V LYFSA WC PCRG+TP LV TYK ++ AGKAFE+V + SD+ +  F++Y  EMPWLA+PF +RE K+ LS+K++V+GIPTLV+LD+ G++ITADGRE V  D EG NFPWKP  L E LG E M+ +G   + +      + + LYFSAHWCPPC+AFTP L  TYE + A   G+ +  IFVSSD++   F +Y+G MP  W +IP  D  R++ L++   V+GIP L       G +IN  A+ A   DP G  FPW P  + DL   S   G  + E   ++V  EG     Q E  + L P+AE E K  +E      +FF   S      QVR + ++     +PQ++I+D+P  GGYY  S   +  VT A++  F++ YK  T+ER QL+
Sbjct:    3 SELLGKSLTSASGELSTDDALKGKIVGLYFSAHWCPPCRGFTPALVETYKKIKTAGKAFEIVFVSSDKDQGAFDEYFGEMPWLAVPFSDREAKARLSKKYKVQGIPTLVILDESGAIITADGREAVSEDLEGLNFPWKPPTLEEALGDEVMSADGDTSEVSELRADAEVVGLYFSAHWCPPCKAFTPVLGATYEKVLA--AGKKMAMIFVSSDRDGQQFKDYFGSMPKGWYAIPPKDK-RKQMLSKLFEVQGIPRLVLFDAKSGDIINPDARGAVSADPSGANFPWRPPVVRDL---SDPEG--INESTCVLVMAEGLSSEAQAELVKELTPLAE-ELKAGEE-----FVFFVGTSSEGPAAQVRALTKLGAPMATPQLIILDIPDQGGYYTSS---ATKVTGATVRSFIESYKAKTIERKQLS 409
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: A0A7S3RD45_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3RD45_9SPIT)

HSP 1 Score: 333 bits (855), Expect = 1.310e-100
Identity = 188/426 (44.13%), Postives = 265/426 (62.21%), Query Frame = 1 
Query:  106 AELLGPTLVNNEGENVPSSSLSGK-VVALYFSASWCGPCRGYTPILVSTYKAVQAA-GKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLD-QDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFMTKNGLKGKETIAG--KTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLGVRGIPALATV-GLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGAD-DMEQK--EAEEALLPIAEAEAKTAKESGQTSIIFFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQL 1356
            A+L+G TLV+ +G+   + +L+GK  VALYFSA WC PCR +TP+L   YK +    GK FEV+ I SD+ +A F++Y+ E PWLALPF++R+KK++LS+KF+V+GIPTL+VLD + G +IT DGR  V  D  G+ FPWKP  + E LG +F++K+     + I G  K + LYFSAHWCPPC+AFTP+L KTY  ++A   G+  + IF SSD++ +SF EY+GEMPW +IP  D  R+  L+    V GIP L  + G  G +IN + +A    DP G ++PW P  + ++A   +     + E     V  EG D DM+ K  EAE AL      E K A   G+T++ F   K       Q+R + ++   +G PQ+VI+D+P +GGYYV  G     V AA++ +F+  YK GTL R QL
Sbjct:   27 AQLVGDTLVSKQGKVSTTEALAGKEAVALYFSAHWCPPCRNFTPLLAGQYKKLTGELGKPFEVIFISSDKDQASFDEYYSEHPWLALPFEDRDKKNALSKKFKVQGIPTLIVLDPKTGEVITKDGRSAVMEDETGEAFPWKPPTIWEALGEDFLSKDDEVSIDEIKGPGKVIGLYFSAHWCPPCKAFTPQLAKTYNKVRA--DGKKFEVIFCSSDRDTASFAEYFGEMPWIAIPHGDK-RKGLLSSMFNVSGIPTLILIDGETGKVINSSGRAVISSDPDGAKYPWHPPAVCNMADDVEG----INEEVCFCVMAEGCDADMQAKLLEAETALSE----ETKAA--GGETTLFFVATKKGEGPVDQIRKLTQLGDPNGKPQLVILDIPDDGGYYVYDG----DVDAAAMGKFLAAYKAGTLARKQL 435
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: A0A8J5XBT9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBT9_DIALT)

HSP 1 Score: 326 bits (836), Expect = 5.230e-98
Identity = 183/433 (42.26%), Postives = 259/433 (59.82%), Query Frame = 1 
Query:  109 ELLGPTLVNNEGENVPSS-SLSGK-VVALYFSASWCGPCRGYTPILVSTYKAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLD-QDGSMITADGREEVGGDPEGKNFPWKPKPLAELLG---TEFMTKNGLKGK-------ETIAGKTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLGVRGIPALATVGLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESGQ--TSIIFFTAKSEANVPTQVRNVCEMKVVS--GSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQL 1356
            +LLGPT+    G   P++ +L GK VV LYFSA WCGPCR +TP L STY A+  AGKAFE+V I SDR +  F+ Y  E PW ALP+  R +K++LS K++V+GIPTLV+LD + G ++T DGRE +  D EG  FPW  K + +LLG    + +T     G        E    K L +YFSAHWCPPC+AFTP+L++ Y+ +K + G +D +F+FVSSD+  + F EY+G  PW  IP  D  R+ AL++R GV GIP    +   G  IN  A+ A M DP G  FPW P+P  DL          L E P+++  +EG D+  Q+EA  A++ +A+A  ++++ +G+  +   FF A + ANV  QVR +      +  G   ++++D+P +GGYYV   G +  VT ASL   + +Y    L R Q+
Sbjct:    6 DLLGPTVATKSGLMKPTAEALEGKEVVGLYFSAHWCGPCRAFTPQLASTYTAIMGAGKAFEIVFISSDRDEGSFDSYWSEQPWPALPYAARGEKAALSRKYKVQGIPTLVLLDGKTGKVLTTDGREVLSSDAEG--FPWPQKSVLDLLGGADAQLLTSPAAGGDGDDVRVGELWGKKKLGVYFSAHWCPPCKAFTPKLIEVYKALK-QSGRDDFEFVFVSSDRSTNEFSEYFGSQPWLGIPPGDP-RKAALSRRFGVEGIPTFVMLDERGATINANARGAVMADPTGARFPWAPEPAADLEDGPDG----LNETPSVVALLEGLDEAAQREAIAAVIRVAKATRESSRAAGEDESPFCFFYATAAANVTLQVRKLTGQPASAPKGHATLLLLDIPDDGGYYV---GDAHDVTDASLKALLADYGAKKLTRQQM 427
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: A0A0M0K094_9EUKA (Nucleoredoxin 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K094_9EUKA)

HSP 1 Score: 321 bits (823), Expect = 3.020e-96
Identity = 175/428 (40.89%), Postives = 259/428 (60.51%), Query Frame = 1 
Query:   94 VQTPAELLGPTLVNNEGENVPSSSLSGKVVALYFSASWCGPCRGYTPILVSTYKAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLDQDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFM--TKNGLKGKETIA--GKTLALYFSAHWCPPCRAFTPRLMKTYET-IKARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLGVRGIPALATV-GLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGF-HLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESGQTSIIFFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQL 1356
            + T ++LLG  L+N E     + +L+GK VALYFSA WC PCRG+TP L   Y +   A K  E+V + SDR +A F  Y+ EMPWLALP+  RE K+ LS+K++V GIP+L++LD+ G++ITADGRE V  DP G  FPWKP  + + LG EF+  T+   +  + I    K + +YFSAHWCPPCR FTP L+  Y+  +KA+     ++ IFVSSD++Q +F EYYG MPW +IP  D  R+  L++   V GIPA   +    G  I    + A   DPKG +FPW+P  + +L   S+  G   + +  AL V +EG     +  A  AL PIA     TAK + +  ++FF   ++    +++R + ++   +G+PQMV++D+P +GG+YV     +  ++A ++  F++ +K G L+R QL
Sbjct:    1 MTTLSQLLGEKLLNKEETVSTADALAGKHVALYFSAHWCPPCRGFTPELAKMYVSHLKA-KGLEIVFVSSDRDEAGFSSYYAEMPWLALPYGERELKAKLSKKYKVSGIPSLIILDESGNLITADGREAVSEDPTGAEFPWKPPSVFDALGDEFLSGTEGETQSLDDIKRYAKVIGMYFSAHWCPPCRGFTPSLVSAYKDHLKAK----GLEIIFVSSDRDQKAFLEYYGSMPWLAIPQGDT-RKAKLSKLFSVDGIPAFVLIDAATGETITTEGRGAVGSDPKGDKFPWFPPTVNNL---SEGEGVGSINDETALCVLLEGCSQATKDAALAALEPIA-----TAKRAAKEELLFFYGPTDDGPASRIRELAKLGAATGTPQMVLLDIPDSGGFYVSD---ATEISADTITAFLEAFKAGALKRKQL 411
[Close]
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Match: R1C0K2_EMIHU (Uncharacterized protein n=4 Tax=Eukaryota TaxID=2759 RepID=R1C0K2_EMIHU)

HSP 1 Score: 320 bits (819), Expect = 8.570e-96
Identity = 186/427 (43.56%), Postives = 257/427 (60.19%), Query Frame = 1 
Query:  109 ELLGPTLVNNEGENVPSSSLSGK-VVALYFSASWCGPCRGYTPILVSTYKAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKSSLSEKFRVRGIPTLVVLDQDGSMITADGREEVGGDPEGKNFPWKPKPLAELLGTEFMTKNG-------LKGKETIAGKTLALYFSAHWCPPCRAFTPRLMKTYETIKARPGGEDVQFIFVSSDKEQSSFDEYYGEMP--WASIPFSDAVRRRALAQRLGVRGIPALATV-GLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQSNGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESGQTSIIFFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAPVTAASLAQFVKEYKEGTLERSQL 1356
            +LLG +L +  G+   +++L GK VVALYFSA WC PCRG+TP+L   YKA+   GKAFEVV + SD+ +A F++Y+ E PWLALPF +R+ K++LS+K++V GIP+LV+LD DG++IT DGR  V    EG +FP+ P    + LG EF+ ++G       LKG+    GK + LYFSAHWCPPCR FTP L+KT   +KA   G+  + IFVSSD++Q SF EY+G M   + +IP  D  R+  L+   GV GIP L TV G  G  IN  A+ A   DP GL FPW PKP+ D A         + +  +L + +EG     Q+ A  A  P+AEA    AK S +    F   K E    +Q+R + ++     +P M+++D+P  G YYV     +   TA ++  F+  YK GTL+R QL
Sbjct:    5 DLLGTSLKSKAGDVETATALKGKAVVALYFSAHWCPPCRGFTPVLADKYKALVGDGKAFEVVFVSSDKDEASFDEYYAEQPWLALPFGSRDVKAALSKKYKVSGIPSLVLLDGDGAIITKDGRSAV---MEG-DFPFTPPTFWDCLGDEFLMQDGDAAEVSQLKGE----GKVIVLYFSAHWCPPCRGFTPELVKTVGKLKA--AGKAFEIIFVSSDRDQKSFQEYFGSMGPHFLAIPQGDP-RKAKLSSFFGVEGIPTLVTVDGATGATINGNARGACGGDPDGLAFPWAPKPVVDFADGCDG----INDTLSLCLLLEGCGLEVQQAAIAAATPLAEA----AKASQEELCFFAATKVEGGPVSQIRQMTKLGDAGSAPAMILLDIPDEGAYYVSD---ATEATATTIQAFLAAYKAGTLDRKQL 409
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4140.10647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC01_ECTSI2.160e-20469.19Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A6V1NWZ1_HETAK7.770e-12046.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6T2CYP1_9EUGL2.790e-10643.06Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0E2L2_9EUKA3.670e-10445.65Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2UY08_9STRA5.820e-10442.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6T0B168_CHRCT1.310e-10344.10Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3RD45_9SPIT1.310e-10044.13Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]
A0A8J5XBT9_DIALT5.230e-9842.26Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A0M0K094_9EUKA3.020e-9640.89Nucleoredoxin 1 n=1 Tax=Chrysochromulina tobinii T... [more]
R1C0K2_EMIHU8.570e-9643.56Uncharacterized protein n=4 Tax=Eukaryota TaxID=27... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4140contigH-paniculata_contig4140:1959..16522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score607.4
Seed ortholog evalue5e-171
Seed eggNOG ortholog2880.D8LC01
KEGG koko:K17609
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cellular oxidant detoxification
EggNOG OGsKOG2501@1,KOG2501@2759
EC1.8.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Exons8
Model size3218
Cds size1281
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4140.10647.1prot_H-paniculata_contig4140.10647.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4140 2046..14672 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930262.5234053-UTR-H-paniculata_contig4140:1958..20451622930262.5234053-UTR-H-paniculata_contig4140:1958..2045Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4140 1959..2045 +
1691481215.4682934-UTR-H-paniculata_contig4140:1958..20451691481215.4682934-UTR-H-paniculata_contig4140:1958..2045Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4140 1959..2045 +
1622930262.703444-UTR-H-paniculata_contig4140:14672..165221622930262.703444-UTR-H-paniculata_contig4140:14672..16522Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4140 14673..16522 +
1691481215.560152-UTR-H-paniculata_contig4140:14672..165221691481215.560152-UTR-H-paniculata_contig4140:14672..16522Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4140 14673..16522 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930262.5398185-CDS-H-paniculata_contig4140:2045..21641622930262.5398185-CDS-H-paniculata_contig4140:2045..2164Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 2046..2164 +
1691481215.481479-CDS-H-paniculata_contig4140:2045..21641691481215.481479-CDS-H-paniculata_contig4140:2045..2164Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 2046..2164 +
1622930262.5528383-CDS-H-paniculata_contig4140:2717..28851622930262.5528383-CDS-H-paniculata_contig4140:2717..2885Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 2718..2885 +
1691481215.491335-CDS-H-paniculata_contig4140:2717..28851691481215.491335-CDS-H-paniculata_contig4140:2717..2885Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 2718..2885 +
1622930262.565426-CDS-H-paniculata_contig4140:8847..91021622930262.565426-CDS-H-paniculata_contig4140:8847..9102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 8848..9102 +
1691481215.5015996-CDS-H-paniculata_contig4140:8847..91021691481215.5015996-CDS-H-paniculata_contig4140:8847..9102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 8848..9102 +
1622930262.579357-CDS-H-paniculata_contig4140:10747..108761622930262.579357-CDS-H-paniculata_contig4140:10747..10876Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 10748..10876 +
1691481215.512588-CDS-H-paniculata_contig4140:10747..108761691481215.512588-CDS-H-paniculata_contig4140:10747..10876Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 10748..10876 +
1622930262.5976422-CDS-H-paniculata_contig4140:12095..122641622930262.5976422-CDS-H-paniculata_contig4140:12095..12264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 12096..12264 +
1691481215.5219364-CDS-H-paniculata_contig4140:12095..122641691481215.5219364-CDS-H-paniculata_contig4140:12095..12264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 12096..12264 +
1622930262.6412308-CDS-H-paniculata_contig4140:12974..131091622930262.6412308-CDS-H-paniculata_contig4140:12974..13109Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 12975..13109 +
1691481215.5308232-CDS-H-paniculata_contig4140:12974..131091691481215.5308232-CDS-H-paniculata_contig4140:12974..13109Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 12975..13109 +
1622930262.6625624-CDS-H-paniculata_contig4140:13645..138041622930262.6625624-CDS-H-paniculata_contig4140:13645..13804Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 13646..13804 +
1691481215.5399013-CDS-H-paniculata_contig4140:13645..138041691481215.5399013-CDS-H-paniculata_contig4140:13645..13804Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 13646..13804 +
1622930262.686388-CDS-H-paniculata_contig4140:14525..146721622930262.686388-CDS-H-paniculata_contig4140:14525..14672Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 14526..14672 +
1691481215.549521-CDS-H-paniculata_contig4140:14525..146721691481215.549521-CDS-H-paniculata_contig4140:14525..14672Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4140 14526..14672 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4140.10647.1

>prot_H-paniculata_contig4140.10647.1 ID=prot_H-paniculata_contig4140.10647.1|Name=mRNA_H-paniculata_contig4140.10647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=427bp
MPVQTPAELLGPTLVNNEGENVPSSSLSGKVVALYFSASWCGPCRGYTPI
LVSTYKAVQAAGKAFEVVLIGSDRTKADFEKYHKEMPWLALPFDNREKKS
SLSEKFRVRGIPTLVVLDQDGSMITADGREEVGGDPEGKNFPWKPKPLAE
LLGTEFMTKNGLKGKETIAGKTLALYFSAHWCPPCRAFTPRLMKTYETIK
ARPGGEDVQFIFVSSDKEQSSFDEYYGEMPWASIPFSDAVRRRALAQRLG
VRGIPALATVGLDGVLINQTAKAAAMQDPKGLEFPWWPKPIEDLAVSSQS
NGFHLQEMPALIVFMEGADDMEQKEAEEALLPIAEAEAKTAKESGQTSII
FFTAKSEANVPTQVRNVCEMKVVSGSPQMVIIDVPGNGGYYVPSGGASAP
VTAASLAQFVKEYKEGTLERSQLTRG*
back to top

mRNA from alignment at H-paniculata_contig4140:1959..16522+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4140.10647.1 ID=mRNA_H-paniculata_contig4140.10647.1|Name=mRNA_H-paniculata_contig4140.10647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14564bp|location=Sequence derived from alignment at H-paniculata_contig4140:1959..16522+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACATGTGCAGACCGTGTTTCTCCGACACTATCTATTCTTGACAGTGGGC
AAGCTTTCCATCAAGAAAAGAGGAAGAAGGAGAAATCATGCCGGTGCAAA
CTCCCGCAGAGCTTCTCGGCCCGACGCTGGTGAACAACGAAGGCGAGAAC
GTGCCTTCATCATCTCTCAGCGGAAAGGTGGTGGCGCTGTACTTCTCGGC
CAGCTGGTAAGTGGAGGCAAAGAGTGTAGTGCAGTGTTGCAACCCTTTCC
CCCATACTCGCTGCCACTTGATCTCGCCATTTGCTATGTGGTGTTGTGGG
ATATATGTCCCGACCTGTTCGTTGCCCCCTTTTTATTTTCGGAGAGTTTG
GTGCTTTGGTGCGTATAGGCGTCACTGCGGTGTAAAGATTAGGCAACTTC
CGATAAGTGGCAGAAACCTAGGCCTCGTAACGCCTTCGTACTATCCACGG
ACTTAACGGAGAAGGCGCCCCGAGGCAACCGTTTTCTGTATGCAGTGCTG
TATCATAAGCCGAAGATTGTGAACGCATACGAGCTGTAGACTATATTGCC
TGTCGTGCTCCTGGTTCATCTGGCACCACGTTCGGGCCCACTTTCAATGG
TGTAGTCTTCTGATGTCCCTGTTTAATCCGATATACTGTAATATACCATT
GTAAATATCGCGTTCGCTGTCGTATATATTGGGTTTCGTTGATTTTTTGT
TTATCCGCGCACATGAAACCCACGTACGTGTTGTCCCTTCCATATATATA
TATATGCAGGTGTGGCCCATGCCGTGGGTACACGCCCATCCTAGTGAGCA
CCTACAAGGCCGTACAGGCTGCGGGGAAGGCTTTTGAGGTGGTGCTAATC
GGATCGGACAGAACTAAGGCCGACTTCGAGAAATACCACAAGGAGATGCC
CTGGCTCGCACTTCCCTTTGACAACAGGTATGTCTCAAACATTCGAAACA
GTTGATTGTATATCAGTGGCTCTATTTGTCGTCGTTGTCAAGCGTAAACA
ATTACAAAACATGATTATGTGAGACCCACCCGCGGACGACGGGTACGGCC
GTACCTTCTCATGGATGTGAGGACACAGGCGGGGTTTTTTTCTCTCTGGG
TCCACAGGGCGTGCGCACGGGGGCTTGAACGAGTCAGGGACAGTTGGAGT
TCGGACATCGATAGGCGTCGGATGTACCCTCTTCGGTGCCGGATTATGAC
CCCCATGCAATATAGGATTGGATGATGACACGAGAGGGGGCGGACAGGTC
TCGTACTGACTTAAGGCGTGTGATGGAGAGCTATGAGTGGTAATCATATC
ACCCCCCAGTTGTGGTGATGTTTTCCGGTTCCTCCGCTGGGATTAAGAAA
TCACTGGAAAACGTCTTCCCGGACAGGCAACAACCCGGTGTAGCGCAGTT
CGTCAGAGTGTATACTGCGGTATCTTGAGCGAGGTCCCACGCTCTTTGAA
TTTATCGTTTAATAACATGCGCTTTCATGGTGGGCGCGAGGGGGGGTGCG
GTAACTTTGGCATAATTTTTATTATAACGATGCACGAAATTCCACATACC
CAGGAAGGAGCAGAGTTCTTTGATGGACTGAAGAAACTTATCTAGGTTGT
AGACGATTTGACAGGTAGGCCGGCCGTTTGAAGGGCAGCATACATGAGCC
TGATAGATTTCAGGTAGCTCTTCAAACTTTGAGCTGAGGCACAAAATATC
ATTGATATAGCACAAGAGCCCTGGATCGGGATCCATGTGACGAAGGATAG
CAGATGATACGCTGAAACAACCACGCTGCGGACATCACAGCGAGAGGTAT
ACGCAAGAACACATATTTATCTGAAGGGGTGATGAACGCGGTCTTGTCCA
CGTCCCCCTTAGCTACAGGTAGTTGCCAGAACGCGCTCATGACATGGGCG
ACGGTGATGACAGCAACGTCGCTGACGGAGTCGAGGCAGTTGTCCATGTT
CGGGAGAGGTCAGCTGGTGGCGGTTTAACGTAATCCCGTAATCAAAGTAG
AACTCGGGTGATCCGATTTTTCTTCGCGATAATACAACAAGGGAAACTCA
GGCCTTGGGGGTCTCCTCGATTATGCCCCACTCAAGCATGTCGTGGACAC
ATATTTCGGCAACGGCGGCAGTGCGGTGGTTGGAACGGAACGGTGCTCGA
TAGACAGGACGAGTGTTTACTGGGACGGGCAAAGTTGCTTTCGCCACGGT
GTAACTACTTAGTTGTTGGATATACAGATGAAACATGGGATGGAATTTCA
GCACACAAATCACGGATGCGGCGCTAGTATTCGTCGGTGAAGGTGGAATC
AGCAAAAGCGGCAGACAACGACTGTACTAGGTGTTGGAGCAACGTTGTTG
ACATTCAGTTGATCAGGGTTTACAACGGAGTATTTGTCTTAGGATTCATC
CGCTTGGCAGATGGACCTCTTCGGATGAGACATTAGCTAGTTGGACAGCC
ACGGAACCGTCTCAGCGGACCATATGGCTGTCCTACGGGCGATGATCATA
GACTATTAATTTCGAGCAGTCAGACCGAATCAACGCATCCTCGGAGAAAA
TGCATGGTTCGACTACTACTGCATAGTCTAATTTCGGCAAGATGTTCATG
AAGCCTAAAGCAAGGGGTTCATTACACAGTTGCAATGTGACGCATTAACA
CAAGGATGCTTCAATTCCGGTAGCATCACGGTGGACCACTGCTACCGAAA
AGGACGAGTCGCGTGACAGGTGACTGTTTGCTTACGCGATGGGTTGTGGG
GATAGTGGTGGCTGAATTAGCAAAAGACAGTTTCACTTGTCCAATCGAAG
ATGGCCCCACAGTTTGACATACCGTGACTATCCAAGAGGAAGAGATCGGG
CCCTAAAGACGAGACCACCAATACCTCGATGCAGCGAATGAATCTGCCGA
GGGTAAGAGTAAGGCACATGAAACCTAGAATGGATAACGGTGAGCCACTA
GCTGCTTTTTAGGAGGCCTACCAACTCGCCACATGGCCCAATAGACAACT
AGAAGTTACACCCACAGAAGTACGGTAAGGGGTTTGCTGAAGGCCGGGGG
AGAGGGGTTGAGGACCGGGTGATTCAAGCCCTGTCTTTTGTGATACCCCT
TGATGGAACTGCAACTTTTGCCATGATTGGGTTTGTTGTACTGTAATATA
TTGATTATACTGTGCTTGACTGCATCCTACTGAACTATCTGTGGGACATG
AATCGTTGAAGATAATTTACTGTAGTGGTTTTACTGTTTAGCACGTATGA
TTGAATGTTATAGCCCAGGCACATTATACTCACTAAGGCGCCATTTTGCC
AAGTGTAATCTGTTACAAGATCTACAACTACCTTCACGAGGAAGGTCTAA
CGCATATTCGGCAAGAAATATCATGGGGAAAACTTGTCGGGCAGAGTTTC
ACTGGTGTCATCATCGCATTATAAGCTTTACCTTGTGATCGGGCGGTCAA
AATCCTGGCTGCGGGTGCGACGGTACTAAGCATCACCTGCAGCCCGATTA
AGGCGCACTTCATTTTTCTAGACTGGGAGTAGTATTAATTGCAACGTTTG
GTGTAACTCTCTTTGCGGATCCATTCGGGATGAATAGACTTGCAGCACCC
TTTTTGGCAGAGTTCGCCGTTTCATTCTGATTCACGTGGGATCTGTGGCC
ATACCCATGAGCCTATATGCGCCTGATCGATTGTGGCCGTTCCCTTTGAA
TTTTACTACTCTGACCGTGATTCAAGCCTCTATTCTGTAATTCTATGGTG
TTCATGTGGCAGCAGTATTCCCTGAGAACCTCATTACTACAGAGGTCACT
CATAGCTCGCTTTGGTTTTGTTTAAACACTTCAGGAAACGAACTTCGTAA
CGGCCGGAAGATAGCTTTGTCAACGACGAGTTGTAAATAATGACGAATAC
GTGGACAGAACGCCTTGGACCAGCTTTCCATAACTGGTTAGTGCATATCA
GGTGCAAACGGGGCTCCATTTTTTTTGCTGTTTCGGGGGATTTAATCTTG
GACTTAGTGTAGAGAGCACGAGCAAGCACTGACTTTTTTCGTTACGGCCA
AATAATAAGCGGGTCAGAAGTTCCCAAGAAGTTGAGCACTCGGCACCACA
GGTCAGGCCGATTATCTGTTTGTTGGCCGGGCTCGAAGATTATCTTGGTT
TCGGGCCAGTCGGGGTTTGTCGTATTGGCAATCTTATTAGGCTAGGCGAA
CTGCGATTATTGAAGACCGCGAGAGCATCTATTTCACCTGATGTGCCCTT
ATTCAACTCGTTGTATCTCACAATCAAGGGTTTAAATCGAACACCGAATG
GTGGGTGCACACCGCATGATTGAGACGGTCCCACACATACCGGTTGCGCA
TGTTGGTTCGGTCAAACAGTTGGACCAAGAAGTTGGTCCCATTACAATTT
GCCCCTGTAATAGCTTCGATGAAGGGCATCTTGTGCTCTTGTGTCGACTG
TGCATGTCACACACCTGTTCTGGGACATCGCGGCTGTTGGTACGAAACAT
TATTTCGTATGCCAGTCTATGGCTGCAGTACTTCAAAAGAGAAAATCATT
GGCACAGAGTATGCACATGGAGGGTTCTCTCCATGGTGGCCCTACGGTAA
GCGAAAGCAAGGGACACTACAAAGATTTCTATATCCTTCTGAGGCGAATA
TTATGCAGTGTACTCGATATACCATGGAGCATGGAACATCTCAGGCAGAT
GAGAGTATTCAAACTGTACTGTTCCAGCCCGAAAGTAAACGGAATCTGCA
TGTGTGACCGTTCGCCGGCTATACGACCACCTAGTAATCAACTGTAAACT
GACCATTCATGGACTTGTAAACGAACAAGTACGTGTTTACCCTAGACAAA
TAATAATATTTTGATATGGTTACAAATGCTCCACTCGTATTTATTCAGGG
GGCGAAAAATTCGTAAGGCAGGGAATGCGGGGTGGGATCTAGACTTCCCC
GCGGTATTAAGTGGTAGACCTGTACGAACGGGTAGTTTTTTGTCGGCTTC
GTAAATTGTGCCTTCGATTTCGTAGTAGAAATGGTTTTGCCCAGTGCAGT
GCAGGGCCCTGGATGGCACGGATGAGCGCCCACGCTCTTTGCATCCGGCA
GATATGGCAAGAGTCGGCGACACTGGAATACTGGCGGTTTCGTTAAGGGT
GGCTTTCTACTCTGTTCCCGAAGTATCTTTTATGTATGTCCAGGCGTGAC
GTGTTAGCTAATGCGGTGTTGATCGCAAGGGATTTAACATGCTTATCGAA
CTCCGAGTCAAAACGTAGAATCTGGAGCTGTTTGACAAACTCTCAAAGTG
ATCGTATCGCCGGTTAAGATCGATAATACGGCCGTACTTCGTGCCGTGTA
AGGTCGTTATTTTGCGGGCGAAGATGAATCCAGGCTTTTGTTTGAAAGCC
TCCCGCTCCCAGGCGGTAAAGGCGAAGGACGGTTGTGCTTTCGCTACAAT
TTCTTGAAATATGGTTGACGGAAAAGATGCCCGAGTTGAGCGTCTCCGGT
TTTCAGTGCTTGAGTATTCTTGCCGTCAGAGCAGCAATTGAAGCGAGCTG
TTCGTCCTTCTTTCAATAATGCGACGTTACAGTGAGGACAGCTTTTATTC
TTCGGGCAGTGGATAGGAACGAGTGTCCATTTTCGACAGTTCCGCGTATT
GTGGCATACGGCTAAATCTAATATGTGTGGATGGCGCAAGTGGTCGCTAA
TTTGAGTGGTGTCATCATCGCAGACTAGGATATAGGCTATACCCGTTTCT
GTCCACATTTTTCTTCGGTTGAGCCGCTGCTTTGTGGGAGTCATCGCCAT
AGCACTCGCGGTCGACCTCGGGGCCTTTGCAGCAGTATAGATTTTGGCGT
GAGCCACTCGATCCGATGAAGAACGACCGATCGCCCTGTCTGGACGTTTG
TTCGACAGCTACCCTGGTTGCCTTTTCCCTAGGAAACACGTCGTCACAGG
CTGAAGAAGGCTATGCATCACCTGCCTCCACCGCGGGCAGGAATGTACGG
CTAGTTGTGACTGTACTGGTGCAGCTGCAGCTGCACGACTGTAATGTTGC
AGTGCAATGTGCCGGGTAGCGGGAGTAAATGTGATCAATGGGACCAGGGA
GGGTGGTGGGCAAGGCCGTGTTGTGTTGGATGGTGATTCCCATCTACTCC
CATCAAATATACTATTCATGTCTGAGGTACATGCTTTGGGGCGCTAGCGT
TAACGACTAAACTGTTGCTGAAAAGACCACAATATACAAGTTTATTGCGC
GAGTTTGACAGTGACCACTATAGAGCACAACAGTGGACAGAAACAGGTTA
GGAAATGGACGGTTTCGGCAAAAAATGGACAACAAAAGATGACAGACGAG
TGGAATATAAGGAGTATACCTCGCGTGATATGGACACTTTGGGGTACAGG
AGGTTCTCCTTCGGAGTATACCGTACTTTCTTGTACTGCCTCGCCCGATT
TCTCTTGTTCTCTTGCTGTGTTTCTTCATTGACGTGTAGAAGGGAAGCGC
TAGTTGGTCTTCAGGGTGAAATCTGCGGAATTCTAGTCATTTAAGCGCCG
TCCACACCGGACGTGACCGTATGTCGCTGTACCCAGAACTGTCGAATATG
GATAGGATATATTATACTCTTTCTCGTCCGTTCCCCAGACACCAATTTGT
CCTTATCACTTTATCTGGTATATTCTCAGCTCTGTTCTTTCCCTTACTGA
TAAAGATTTAGTTGGATCAATGGAACAACTGTAGGTCGAATTCAGCTGCA
TGACCATTAACATGGGTACAATGGAGTTGGAGTAGGAGGTCCAGAATTAT
AGTGCAATTGAACGGCGGGGTGACTTACTGCATAACGAAAATGCCACTCT
ACCTCCCCTCTCCTTCCCCCCAACAAAACAACAATGAAGAGAGAAGAAGT
CCAGCCTGAGCGAGAAATTCAGGGTGCGCGGCATCCCTACCCTCGTCGTA
TTGGACCAGGATGGTAGCATGATCACCGCGGACGGACGGGAAGAGGTTGG
GGGGGACCCCGAGGGCAAAAACTTCCCGTGGAAACCCAAGCCCCTGGCGG
AGCTTCTCGGCACAGAGTTCATGACCAAGAACGGGCTGAAGGGCAAGGAA
ACGATCGCCGGGAAAACATTGGCGCTTTATTTCTCGGCCCACTGGTGAGA
CCATGGACTACCGTAGTTATCTTCATGTATGTCAACAGAAATATGGAAGA
AGCGAAGATTGCTACCGTAAATCCGTAACCCCGTTTTTCGGTTGGGCCTT
GTACTGAAGTTGAGGGAGGGGGAGGAGAGGGCAGGGGACTGACACCATCA
AAATTTAAACTGTTGCTTCACTTTAGTACTTGAAGTTATCATTTTTGAAT
TAACACTGCCACAGTCAGTTGGACTAAAACTCTCAACCTCAAATCTCAAA
TCATGACCTCCATTGTTGAGGTTATACACCTGACTTGAATCTGGATTTGT
ATATACTACACTTAAAGAGCAACATGAAATAAAACGGGGGAGCGGAGTCT
CAATGCATATTATACTAGCTATGTTTGACGGATCCAAAATACATTTGGGA
TGTTTAATATGTGTACTTGCGTGAAGAAACTCAGTAATTCGTGTATATCT
TGATCCTTCTACCTCCCTAATCCTATCTAATCCTCGTGTGGTCCTCACCT
CAAAGACAGGGGAGAAAGATGCCGTTGAGATTTGATGTGAGGACCAGTTT
AGGGGGCCGCCGCTGTCCAGACAGATGGTTATTCTACAGACAAGACATCA
AGCACAGACAAGTAGTTGACATAGTTCGGCCCACAGCGACAGCGGCGCAC
GACATCCAATGTCAGGTGCCATTTTTTGTTACATTCATCCGGGGGTGATG
AAAAGCATTGAAATCCAATGAAAAACAGTATTTACTAGCGTCGACCACTC
TTATATATGCTTGGCCTCTTGGGCATCATGACCAGGCCTTTAGTTACTCC
GTGAGGCGTTGAAAATCTGTTTTTTTATGAGTTTTCTTGTTAAGAATTAC
GTCAAGTACATGACGAAACGCCGATACTGTCGGATAAAAATATGAAAGTG
GTTAATACATGGAAACGATCAAATGCAAAATGTGTATATTAATGAGGGCA
CCTTTCCTTGGCGAGGATTTTTTTCCAGCCCTGAATATGCTTCTCTTATT
AAGATTTTCTCATTATAGGCGCAATCATACGCAACAACGTATGAAGAAAC
GTTCAATCATGGGTGGATATGGACTGTAATTGGACCATGGCGAAACCACG
CGTTAGTGAGGGAGGGAGATAATGACCAAGACTAGGCGAACAGACACAAC
GTGCCGGTCTGTATGCAAATTGAGAGTGACGTCGTGATCGTGGTCCGCCG
TACCAATGTATGCGTCTGTACCTTTTTAACATGTGCTGTGGAGTTTACCC
CTCCGGAGCCCATGATCTACTTACCAGATGTACACGAATTGTTCATTAGA
GCTATTCGGTTGTTACGATAAAAACCTTCTATATACTCGTCCTCCTTTAA
CACTGATCGAAGAGAGAAAAGGCTCCAACCACCAGGCGAATATTTGAAAG
AAACCGTCGTGAATGTTCGGAAATATTCGTAGCGTCCGGCGAGTGCAACA
ATTTTGAGCCTTTTTTTTTTTCGTAAGTATCAACAAAATGTAGTGCATAG
ACACATGATCACGCCTTTTCCAAAGCTTTAATCTCTGGTCACACTCTTGC
GCGGAGAGCGCTCTCTCTTGTCGGGCCTCCGGCGTCTCTCACGAGGGAAT
GATAACTGGTTATTTCTTTGATGCGTATTAACCATGCAGGTGTCCTCCGT
GCCGAGCGTTCACGCCTCGCCTGATGAAGACGTACGAGACGATTAAGGCC
AGGCCGGGAGGAGAGGACGTGCAGTTCATCTTCGTCAGCTCGGACAAAGA
ACAGTCATCCTTCGACGAGTGAGAAAAGAGAGGGAGAAAGAATGATGGGA
TGAGTTGTTCGGTGGTACTTGTTTGTTTGATATGTTTTTCTGAAATGTAA
ATATCCTCGCCTGAACACACATTCACACACACACACAGCTATTGGCCAAG
TAAAAGAGGCTCGTCGGTTAACTAGGCTTGGGCGATTGATTGCTTTGTAA
ACGAGGCCGTCCTCCGCCCCCCGTCCCCCTCCTTCCCTGTTTTTCGGAAA
ATGAAAAATCACAATAGCGAGCTCGACATCGGACGAGTCTGTGTCCGAAC
TTGTACGGAATGTGTAATGAGGGCAATATCCATCGTGTGCATCATCCTAG
CACCTTCTTTTCTCAGGGCATGCTCCAACTTTGTTTCTATTGCCTCCCCC
CCCTGGCCTTTCCTTTAATGCTGTGCACAACCTCGTAGATATGAGGTCGC
GTTGTCGTTCATTCGGTTTTTGAATTTTTCCGCACCATGCTTTTCCTTTC
CCAGCCGGTTTCAGGAAATCCTCCGACCGGTGTTTGCAAGGCGTTTTTTT
TTCGATTAGTAGTGGAGCCATGACTCAGCTAGTGCAGTGCGTGACTTCTG
TTCGGTGCACGCACGACGACGTTAGAGCTGTGTTAATATTTGAATTCAAA
GCACAAGATCATTCAGTCGACGTCTGATAAAACCAGAGTTGCCAATTAGC
CTTGAAGTATCAAGTATCGTGTATCCGGTTTTACAGATGTTTTAGTATGT
GGTGACACTACCTGATGAACGTACAGTAGTACAGAGCTACAGGTATTGAA
CAGCCCCTATTCATAGTAGCAGGCACGAATGGGTTCTATTTTTTTTTATT
TTTTAGAAGCTAATCGATATTCTTGTTCAGTCTGGCGAGGTACTTGGTGT
CGGGTTATTTGTTTTTCCCTTTTTCCTTTTTTTTTTCTTCTGGTTTTGAG
TTGGGTTTTTTTTCCATTCTTCAGATAACGTTAAAATATTATGTCGAAAT
ATTAGAAACTTCAAATATGATTCAGAAATACTGTAGCAGGCATGAATATC
CCTTTTTCGCTTCTGAAATTTTCGAAAAATTTAGGAGTAAGAAAAAACTG
TAAAAGGAGATAAATCGGGAAATAACAACAACGTTTAGAACAGTCCTTAA
TGCAATATGTTGACTCCTCTCTATCTCTGTCGATATGTATGTATCCCTGT
CTCTGTCTGTGATGTCTTGCTGTGGCTTTGCGTCCAGGTACTACGGGGAG
ATGCCGTGGGCGTCCATCCCGTTCAGTGACGCTGTCAGACGGCGAGCTCT
GGCACAGCGCTTGGGTGTTCGCGGGATTCCTGCCTTGGCCACCGTCGGAC
TGGACGGCGTGCTGATCAACCAGACAGCTAAGGCCGCGGCTATGCAGGAC
CCCAAGGTGTGGAATTCTTTTGAGATACTCTTGACAGATTATGTGATCAT
GTACTAAGGTGAAATAGTGTGAAAGTGACAAATCACACGCATTTGGGATG
TAATTGATGTATTAATCTCTCTCGATGCGGATCGAGGTGGGAGTTGGGAC
TGTAAGTTCCACTCCGTTTCAACACGTCAACATATGCCCCTCGTCGTACT
AGAGGGGCGAGTGGGGTGGGGGAGGGGTTAGAATAGTGTAAGGTATTATC
TGAAGTCGGGCTAGAGTGGTCGGATAAGAAAACACGTAGTGTTTACATGA
TAGCAAGTGTATCTATCTAAGCGTCAAAGTCCCTCTCGTCAACGTGGAAC
TTGGTTGAACGGGATTGCTACGAAGTGGACAAAAAATATAACAAAAACAC
AGGAAGGAACGAATGTGGATTATCTGGGGAAGGAAGGATTGGATAACAAG
AATAGAATTATATATCCTAGTGATCCCTGATATCAAGTTGATGTACATGT
TAAATAGACCTGTTTTTTTGTAAACTGTCTGGTGCGGGGGACAGCCCCAT
CTAGTTGATCTTCGATCAATTTGTTTCGTCCTAGCGAGAATTTCCCTCCT
CCGCTGACCGTTGATGTTGAGCTAGCTCCAGCTCGGGTTGAGGCCTAACG
CGCATCACGACTATCATGAACGCGAATGTGGCTTATCTATCTGCAAACGT
TGTTTTTGGTGCCCAGGGGTTGGAGTTCCCGTGGTGGCCTAAGCCCATCG
AGGACCTCGCGGTCAGCAGTCAGAGTAACGGCTTTCACCTCCAGGAGATG
CCTGCCCTCATCGTGTTCATGGAGGGGGCAGACGATATGGAGCAGAAGGA
GGTGTGTGCGTTTTTGAAAACAGCCGGAATAAGTACTTGCCATGGCATGG
TAATGTTTTCATTTGTCTCCTCCGTTCCCCCCTACATACCCTCACATCCT
GAATTAGCCCGTGTAATAGTCATCAAGTCGCCGTCCGTAGTTGTCCTGGC
GCATGTGGAGCGCACGTTTTTTGCCTTATTTAAGGTGTTTACCAACGTAC
ACATTGCCTACAGGGGGTAGGGGTTAGGGTTAGGGTGAGCGTTATTTCCG
GGGTTGATTCTACTCCCGTCGAGGTACAATACAAAAGGAACTGTCAGACG
TTTATTTTTCACCAATTGGTGAACAAAGCTCGTTTGTCGTTGTGCCCTTG
TGCGTGTGTTGTTTTTTCTGTTACTGCGCAGAGTGTTGTTTCCGACAAGT
TTCATACACTGGCCTGACTAACCCACGTCAAATATTTATCACGTTGAGCG
TGTTTCTCGTATCTTCTTTCCCCCCTTCGGCTGCATATTTCTTGGGGGAA
TTTTACGGATTTATCGAAAAATTCGTGGAACTCTCAGGCGGAAGAGGCCC
TTCTACCCATCGCAGAGGCCGAGGCTAAGACCGCGAAAGAGAGCGGCCAG
ACCTCCATTATTTTCTTCACGGCTAAGTCGGAGGCTAACGTGCCCACGCA
AGTACGGAACGTGTGTGAGATGAAGGTGGTGTCGGGATCTCCACAGGTAT
ATATTAGCTACGTCAGTTCCACGGCACGTATTTCCGAATACCAGTCTCAC
AGATTCAGATTGAAACTTCAATTGTCAGATTTTACTCATATTGTACGAAA
TATCAGATTAAAATTCGATTGAAAAAATGAGCTCTGCCGTCGGTAACGGG
TGAAAAGCGAATCCAAGTTCGAAACCGAAATGTGTTCTCGCACTCTACCA
ATGGCTCAGCTTAGTTTTCGTAATCGGTTTATTCTGCTCTATTATCTTGC
AGAAATAGGCCGTGTTTTCATTACCTCCCGCACCTTTCGTTAAACCTTTC
GTATAGTTTGGACTCTATAAATTAAACTCTGGGACTTGTTGCCTGCATCA
TCAACACCGTTCCCAATCATTTTGAACCCTGGAACCAGCGAGCGCCAGTT
TGCGATAACAGCACTTTTACCGTTATATTTGGAAAAAAAAAGAAGAGTGG
ATTAAAAACGTGATGTGTGTCCGTTCTCGCTCTGTACTTTGTCCAAGAAA
TGATTTCTGGGTGAGCAGAAAACGCCTCCTATTTTTCGATTTGAAGTATG
CAAAGCAGCTGTATAGAGTTTTATCAACATTTCCAGACATTCCCGCTAGT
ATCCACGACAGATCGAGAGCAAAGTTATCTTTTGATCGGTTCCCGAGGCA
TTCTGTTGGCTACACGTAAACCTCACAGCTTTCGCTAAAACTTTTTTTGT
CGACGTACCTACTTTAGATGGTCATCATCGACGTGCCCGGAAATGGAGGG
TACTACGTGCCGTCTGGCGGAGCGTCTGCACCGGTTACCGCTGCTTCTCT
CGCGCAATTTGTGAAGGAGTACAAGGAGGGTACGCTGGAACGGTCACAAC
TCACTCGAGGATAGACGGAAGATCTCATCTCTTGGTTCGTAGATGGATTG
ATGTGCAAAGGTTTTGATCACTGCTCCTGTCGGATTAGTATAATCCGTCA
TAAGCGTCAAGCGACATTGGAGATTAGCGCATGGCCACAAGCCCGATTTC
TCTACTGGATGTGAATTTGGATTATTCTTGTTGGATTAATATTATCCGTT
ATTTGCCTGAAAGAGGATATTGAGAATTATGTACGAGAGGAAGACCGCTA
ACTCCCTCGGCGTCGACGATAGATGGGGGGTTGGCACGGTGCTGGATCTC
ACCTACTTATTTTGCGTGTAGGATATATTAATTTTCTTGTAAAGCATACC
GCAAAAGTCAACGTGTAGCTCATGCAGCGTTGCAAGTTAACGTCGCAGTA
TAGTATTCAGTCGGTTGATCGGTTATTCAATCTGCATGCATAATGCAGGT
TGGGCATATGGCCTGATGCTCTTTTCCCAGCCGTCTTGTGATGTCTTGGG
GGGAAGGAATCAACGACACTGATTTGCTTTGTAGTCACATGTGTTGGCGT
TTTGGTGATGTATTCGTATCGTGAGTGCCAGCCAACATAAGATGGATGCC
TACGAAAAATTAACCAAGTGTTACTGACGTCCTGAATGTCATCATATTGT
TTGTTGTATGGACTCAAGGACAACTAACGTACATGCGGTGCGTTTTATTC
GCCAAATTGAACGTAGTATTATTTCGTGAAGGATATGTTGGGACGGAAAG
TAAACCAGGTGTTGACGTCCCGACTGCTGTCATCCTATCGTTGTGTGTAC
TCACAAACAACCGATGCGCATGTAGTGCGTATCATTCCCTAAATTGAAAT
GTGGTGTTGTTGGAAAACTGGGAACGTGCGCATCCTCTCTGCAGGGCACT
TCCCCACGCACTTTTTTCTTGGTGCTATTCTCTCTTTCGCATAAGTCTGT
TCCGTTAACTGTTTACCGCATATCTCTTTAGGATGGAGCCCGATCTTGAA
ACGGATTGTTGCGTTGGATTTCGTGACGTTTTTTCCGTCAAGAGTTCTTA
TTCTGAATAAATGCTCCGAAAATTGTCCAGAAGAAGAATGTTCTTGTCGA
CCTTTTAAGTGGTTCAGCAGCACGACGTGGTCGCCCACTACGCTCACAAC
CTCATTCCTTGTTGCCGGAACCAGAAGCGCTACCACTCTTCACTACGAAT
CCTCGGACTATCTACAATAGCCCGTCCAATAGACCTGATAGCGAGCGCTC
CGAGCTCGTCAACCGGGATCACATCTCGATCAACTAGTGGGAGCTCTTCA
TCTCGTCGTATTGGCAACAATTGCGAGCTGAGTGAGGAGGGCCGCAACGT
GTTGGCTCTGCGACACGCGCTGTCTTTCCCTTCTGGCAAGGTGAGGCTCC
CAGCCGGCGTCGGCCTGAAGTTGGCTGAAGAATTTGGGGTCAGTGAGAGG
TACCCGCGGTTGCCATGGATGCGCGTGAACAAATAACTCGACGAAGAGAA
TGTGGTTTTCTGAAGACACGGGGGAGACCTGGCCGGTCGTCGGACTTTAC
GTCGCGGAAACAGAGCAAAATTCGAGAATCAGCGCCCCAAATCGCACGCT
GATGCTGGACCAACTATCCGCCGAGCTTGCCGAGGTCGGTCTTACCGTCG
GCAGCAGCAAGCTTGCTCACTGGCTTAAACTCATGGGGGAACGAGGGTTC
AGTAACGGATAACCCCCTCGTTTTCTTTCCACCACAAGAAAATCGCGTGG
ACTTCATCGTCGACCATATTTCCCGCAATCGTAGAACGTGCCACGGACCT
ACGCCCGAACGGGTAGGGTAGCTCGTGAACTGAGCATGACTGGAACTCTG
GTCAGAGGTCTTTT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4140:1959..16522+

>mRNA_H-paniculata_contig4140.10647.1 ID=mRNA_H-paniculata_contig4140.10647.1|Name=mRNA_H-paniculata_contig4140.10647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2562bp|location=Sequence derived from alignment at H-paniculata_contig4140:1959..16522+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGGTGCAAACTCCCGCAGAGCTTCTCGGCCCGACGCTGGTGAACAA
CGAAGGCGAGAACGTGCCTTCATCATCTCTCAGCGGAAAGGTGGTGGCGC
TGTACTTCTCGGCCAGCTGATGCCGGTGCAAACTCCCGCAGAGCTTCTCG
GCCCGACGCTGGTGAACAACGAAGGCGAGAACGTGCCTTCATCATCTCTC
AGCGGAAAGGTGGTGGCGCTGTACTTCTCGGCCAGCTGGTGTGGCCCATG
CCGTGGGTACACGCCCATCCTAGTGAGCACCTACAAGGCCGTACAGGCTG
CGGGGAAGGCTTTTGAGGTGGTGCTAATCGGATCGGACAGAACTAAGGCC
GACTTCGAGAAATACCACAAGGAGATGCCCTGGCTCGCACTTCCCTTTGA
CAACAGGTGTGGCCCATGCCGTGGGTACACGCCCATCCTAGTGAGCACCT
ACAAGGCCGTACAGGCTGCGGGGAAGGCTTTTGAGGTGGTGCTAATCGGA
TCGGACAGAACTAAGGCCGACTTCGAGAAATACCACAAGGAGATGCCCTG
GCTCGCACTTCCCTTTGACAACAGAGAGAAGAAGTCCAGCCTGAGCGAGA
AATTCAGGGTGCGCGGCATCCCTACCCTCGTCGTATTGGACCAGGATGGT
AGCATGATCACCGCGGACGGACGGGAAGAGGTTGGGGGGGACCCCGAGGG
CAAAAACTTCCCGTGGAAACCCAAGCCCCTGGCGGAGCTTCTCGGCACAG
AGTTCATGACCAAGAACGGGCTGAAGGGCAAGGAAACGATCGCCGGGAAA
ACATTGGCGCTTTATTTCTCGGCCCACTGAGAGAAGAAGTCCAGCCTGAG
CGAGAAATTCAGGGTGCGCGGCATCCCTACCCTCGTCGTATTGGACCAGG
ATGGTAGCATGATCACCGCGGACGGACGGGAAGAGGTTGGGGGGGACCCC
GAGGGCAAAAACTTCCCGTGGAAACCCAAGCCCCTGGCGGAGCTTCTCGG
CACAGAGTTCATGACCAAGAACGGGCTGAAGGGCAAGGAAACGATCGCCG
GGAAAACATTGGCGCTTTATTTCTCGGCCCACTGGTGTCCTCCGTGCCGA
GCGTTCACGCCTCGCCTGATGAAGACGTACGAGACGATTAAGGCCAGGCC
GGGAGGAGAGGACGTGCAGTTCATCTTCGTCAGCTCGGACAAAGAACAGT
CATCCTTCGACGAGTGTCCTCCGTGCCGAGCGTTCACGCCTCGCCTGATG
AAGACGTACGAGACGATTAAGGCCAGGCCGGGAGGAGAGGACGTGCAGTT
CATCTTCGTCAGCTCGGACAAAGAACAGTCATCCTTCGACGAGTACTACG
GGGAGATGCCGTGGGCGTCCATCCCGTTCAGTGACGCTGTCAGACGGCGA
GCTCTGGCACAGCGCTTGGGTGTTCGCGGGATTCCTGCCTTGGCCACCGT
CGGACTGGACGGCGTGCTGATCAACCAGACAGCTAAGGCCGCGGCTATGC
AGGACCCCAAGGTACTACGGGGAGATGCCGTGGGCGTCCATCCCGTTCAG
TGACGCTGTCAGACGGCGAGCTCTGGCACAGCGCTTGGGTGTTCGCGGGA
TTCCTGCCTTGGCCACCGTCGGACTGGACGGCGTGCTGATCAACCAGACA
GCTAAGGCCGCGGCTATGCAGGACCCCAAGGGGTTGGAGTTCCCGTGGTG
GCCTAAGCCCATCGAGGACCTCGCGGTCAGCAGTCAGAGTAACGGCTTTC
ACCTCCAGGAGATGCCTGCCCTCATCGTGTTCATGGAGGGGGCAGACGAT
ATGGAGCAGAAGGAGGGGTTGGAGTTCCCGTGGTGGCCTAAGCCCATCGA
GGACCTCGCGGTCAGCAGTCAGAGTAACGGCTTTCACCTCCAGGAGATGC
CTGCCCTCATCGTGTTCATGGAGGGGGCAGACGATATGGAGCAGAAGGAG
GCGGAAGAGGCCCTTCTACCCATCGCAGAGGCCGAGGCTAAGACCGCGAA
AGAGAGCGGCCAGACCTCCATTATTTTCTTCACGGCTAAGTCGGAGGCTA
ACGTGCCCACGCAAGTACGGAACGTGTGTGAGATGAAGGTGGTGTCGGGA
TCTCCACAGGCGGAAGAGGCCCTTCTACCCATCGCAGAGGCCGAGGCTAA
GACCGCGAAAGAGAGCGGCCAGACCTCCATTATTTTCTTCACGGCTAAGT
CGGAGGCTAACGTGCCCACGCAAGTACGGAACGTGTGTGAGATGAAGGTG
GTGTCGGGATCTCCACAGATGGTCATCATCGACGTGCCCGGAAATGGAGG
GTACTACGTGCCGTCTGGCGGAGCGTCTGCACCGGTTACCGCTGCTTCTC
TCGCGCAATTTGTGAAGGAGTACAAGGAGGGTACGCTGGAACGGTCACAA
CTCACTCGAGGATAGATGGTCATCATCGACGTGCCCGGAAATGGAGGGTA
CTACGTGCCGTCTGGCGGAGCGTCTGCACCGGTTACCGCTGCTTCTCTCG
CGCAATTTGTGAAGGAGTACAAGGAGGGTACGCTGGAACGGTCACAACTC
ACTCGAGGATAG
back to top