prot_H-paniculata_contig4133.10632.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4133.10632.1
Unique Nameprot_H-paniculata_contig4133.10632.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length179
Homology
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BLAST of mRNA_H-paniculata_contig4133.10632.1 vs. uniprot
Match: D7FHX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX6_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 7.690e-13
Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 0 
Query:   46 VTRRPGPPQVYSPYSPATLQLFDVLRNDGFTERQVQSLAEDERLGPVYAKVMKHCEPFWTAKNSKKVNKYLGFGACSARFMCPDEFFKWSQCKKSQERGENRSECLEFKEDADRCGVKMTQLMLRAALADDWY 178
            VT    P Q   P   +TL+LF       F+ R+   L +   LGP+Y  V   C  F        ++K   F  CS+R +CP E  +   C ++     + S C EF+++ +RCGVKM+Q +LRAAL+DDW+
Sbjct:   27 VTLNTPPTQEDIPQLLSTLKLF----RHQFSPRERHCLGKHPVLGPLYEGVQGKCGQF--------IDKPRRFAVCSSRQLCPKEQSQLLACIRTTR---DASMCHEFRDEVERCGVKMSQRLLRAALSDDWF 144
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4133.10632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHX6_ECTSI7.690e-1335.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4133contigH-paniculata_contig4133:7449..10197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4133.10632.1mRNA_H-paniculata_contig4133.10632.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4133 7433..10789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4133.10632.1 ID=prot_H-paniculata_contig4133.10632.1|Name=mRNA_H-paniculata_contig4133.10632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp
MTAMDDGGVPASSSEKAAASSQSAHSQVPKPTKQRQLMAAAPPTPVTRRP
GPPQVYSPYSPATLQLFDVLRNDGFTERQVQSLAEDERLGPVYAKVMKHC
EPFWTAKNSKKVNKYLGFGACSARFMCPDEFFKWSQCKKSQERGENRSEC
LEFKEDADRCGVKMTQLMLRAALADDWY*
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