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Homology
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: A0A6H5JE17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE17_9PHAE) HSP 1 Score: 566 bits (1459), Expect = 1.290e-195 Identity = 281/404 (69.55%), Postives = 328/404 (81.19%), Query Frame = 1
Query: 1 QARAQSWKGMYHLLEAFGERFEQRQ-QAVASGG---NVAHSKA--------SALLLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIASINGAIAQARIWLDLDMLGVATG---RSAKQSERRTKSHNGVVSACALQCLCQLELLRGGTRPEVDYEAFTSRRHPTAVRITAVQSMIQLYLAYDRGIADNAP--AEGLSCALLWVLDFVESETFAGDTRPRYWAIRCILDALERRPLVASHLARYQTDDPLLGECDPWAGTEFFSPKGPGRAAYRANGPLPKGFPRAQEIAERLWSLMINGTAFDQGLRHLCFQLWRDIWGLETPPCLKNIVKEKTLGWREKLVAEDPQNFRRGYSSK 1161
+ RAQ+W+G+ HLL+AF ERFEQR ++ AS G + H +A SALLLPNWFED+ EYRLKK+LIWAAANMRARDGCTPLE LDLLV LLRENDNCEN+ +DDYYVAQVLTALGQVST EAGLP++S+ AI+QAR+WLDLDMLGV++ +AK + R TKSHNGVV+ACALQCLCQLE+LRGG RPEVDYE +T RHPT VRI A QS+I LYLAYD G+AD+A EGLS ALLWVLDFVESE AGD RPRYWA+RC+LDALERRPLVASHLAR+Q+DD LLGECDPWA EFF+P+GPGRAAYR +GPLPK FPRA E AERLW+LM GTA+DQ LRHLCFQLWR+IWGLETPPCL N + EK GWREK++ + +N + + ++
Sbjct: 195 ETRAQNWRGLEHLLKAFAERFEQRDSKSPASSGMRLGIGHDEAGSGGGNRKSALLLPNWFEDSTEYRLKKALIWAAANMRARDGCTPLECLDLLVVLLRENDNCENSRSDDYYVAQVLTALGQVSTTQEAGLPVSSVAEAISQARLWLDLDMLGVSSSGHKATAKPATRTTKSHNGVVAACALQCLCQLEMLRGG-RPEVDYEEYTEGRHPTNVRIAAAQSIIHLYLAYDSGLADDAEDEGEGLSSALLWVLDFVESEEPAGDGRPRYWAVRCLLDALERRPLVASHLARFQSDDSLLGECDPWAEMEFFTPRGPGRAAYRPDGPLPKEFPRAAEAAERLWALMNEGTAYDQALRHLCFQLWRNIWGLETPPCLVNNIPEKVEGWREKMIVGESKNLSKDHRAR 597
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: D7G4X2_ECTSI (Transcription initiation factor TFIID subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X2_ECTSI) HSP 1 Score: 561 bits (1446), Expect = 2.990e-185 Identity = 279/404 (69.06%), Postives = 327/404 (80.94%), Query Frame = 1
Query: 1 QARAQSWKGMYHLLEAFGERFEQRQ-QAVASGG---NVAHSKA--------SALLLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIASINGAIAQARIWLDLDMLGVATG---RSAKQSERRTKSHNGVVSACALQCLCQLELLRGGTRPEVDYEAFTSRRHPTAVRITAVQSMIQLYLAYDRGIADNAP--AEGLSCALLWVLDFVESETFAGDTRPRYWAIRCILDALERRPLVASHLARYQTDDPLLGECDPWAGTEFFSPKGPGRAAYRANGPLPKGFPRAQEIAERLWSLMINGTAFDQGLRHLCFQLWRDIWGLETPPCLKNIVKEKTLGWREKLVAEDPQNFRRGYSSK 1161
+ RAQ+W+G+ HLL+AF ERFEQR ++ AS G + H +A SALLLPNWFED+ EYRLKK+LIWAAANMRARDGCTPLE LDLLV LLRENDNCEN+ +DDYYVAQVLT+LGQVST EAGLP +S+ AI+QAR+WLDLDMLGV++ +AK + R TKSHNGVV+ACALQCLCQLE+LRGG RPEVDYE +T RHPT VRI A QS+I LYLAYD G+A++A EGLS ALLWVLDFVESE AGD RPRYWA+RC+LDALERRPLVASHLAR+Q+DD LLGECDPWA EFF+P+GPGRAAYR +GPLPK FPRA E AERLW+LM GTA+DQ LRHLCFQLWR+IWGLETPPCL N + EK GWREK++ + +N + + ++
Sbjct: 921 ETRAQNWRGLEHLLKAFAERFEQRDSKSPASSGMRLGIGHDEAGSGGGNRKSALLLPNWFEDSTEYRLKKALIWAAANMRARDGCTPLEVLDLLVVLLRENDNCENSRSDDYYVAQVLTSLGQVSTTQEAGLPASSVAEAISQARLWLDLDMLGVSSSGHKATAKPATRTTKSHNGVVAACALQCLCQLEMLRGG-RPEVDYEEYTEGRHPTNVRIAAAQSIIHLYLAYDSGLAEDAEDDGEGLSSALLWVLDFVESEEPAGDGRPRYWAVRCLLDALERRPLVASHLARFQSDDSLLGECDPWAEMEFFTPRGPGRAAYRPDGPLPKEFPRAAEAAERLWALMNEGTAYDQALRHLCFQLWRNIWGLETPPCLVNNIPEKLEGWREKMIVGESKNLAKDHRAR 1323
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: A0A836CI26_9STRA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI26_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.300e-51 Identity = 146/415 (35.18%), Postives = 179/415 (43.13%), Query Frame = 1
Query: 19 WKGMYHLLEAFGERFEQRQQAVASGGNVAHSK-------------------------ASALLLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIA------------SINGAIAQARIWLDLDMLGVATGRSAKQSERRTKSHNGVVSACALQ-------------------CLCQLELLRGGTRPEVDYEAFTSRRHPTAVRITAVQSMIQLYLAYDR---------------------------GIADNAPAEGLSCALLWVLDFVESETFAGDTRPRYWAIRCILDALERRPLVASHLARYQTDDPLLGECDPWAGTEFFSPKG-----PGRAAYRANGPLPKGFPRAQEIAERLWSLMINGTAF 999
W G+ LL FGERF A +G A A+LLPNWF+DA EY LKK+ +WAAA +RA G P LL LLR+NDN EN DDYYVAQVL A GQV S A+ WL+ D L SHNGV++ACALQ L QLELL G P + + + +P AVR+ A+QS+IQ YLA D G P G + AL +VL + D R R A+ +LDALERRP A+HLAR+Q+DD LLG DPW F +P+G P YRA+ PLP+ FP A LW LM GT++
Sbjct: 958 WHGLAALLRFFGERF-----AAGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVLLPNWFDDADEYALKKAAVWAAACVRAVCGGAPAAPRALLAALLRDNDNSENAWRDDYYVAQVLVAAGQVXXXXXXXXXXXXXXXXXXXAERQSTEALHAEVTRWLEADAL--------------RGSHNGVITACALQGVSVYCRRRTXXXXXXXXXALSQLELLLGDA-PRTPFHRYAAIHYPIAVRLAAIQSIIQHYLAEDPDPGPSSAQLPXXXXXXXXXXXXXXXXGGQQFTGPCAGFASALAYVLRVAGGDA---DPRVRAGAVELLLDALERRPPRAAHLARFQSDDALLGARDPWCAHVFAAPRGGLDSVPRGFVYRADAPLPRAFPGDAAAAAELWRLMTRGTSY 1349
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: F4PNV5_CAVFA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PNV5_CAVFA) HSP 1 Score: 73.6 bits (179), Expect = 2.570e-10 Identity = 81/321 (25.23%), Postives = 129/321 (40.19%), Query Frame = 1
Query: 118 SALLLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIASINGAIAQARIWLDLDMLGVATGRSAKQSERRTKSHNGVVSACALQCLCQLELLRGGTRPEVDYEAFTSRRHPT---AVRITAVQSMIQLYLAYDRGIADNAPAEGLSCALLWVLDFVESETFAGDTRPRYWAIRCILDALERR--PLVASHLARYQTDDPLLGECDPWAGTEFFSPKGPGRAAYRANGPLPKGFPRAQEIAERLWSLMINGTA-FDQGLRHLCFQLWRDIWGLETP 1062
S LL N F D + Y +KK + A + ++ G TP+E +D L+ LL++NDN N +D+YYVA VL++L V T I+ I+G + + +L D L HN + SAC L +CQL+ + + +D + F + T +R TA Q +L Y + + N + ILD E+ PL+ L L+G P + Y + + ER+W+ + + T +D LR+ +L+R +WG TP
Sbjct: 793 SRLLAENNFSDFSAYFVKKIIPQAVSMIKDSQGRTPIEGIDFLLDLLKDNDNSLNAYSDNYYVASVLSSLANVHTTNSTH--ISEIHGQLTR---YLRFDQLYPCY-------------HNTITSAC-LTSICQLQASK---QIGLDLKFFKDHFNYTYYEEIRKTAFQCYYRLAYLYPQAASGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNLILDYFEKESSPLMRQFLIG------LVGSPPPNMDDRQY--------VYLFRDDV--------SLIERVWNYINSKTTCYDTTLRNSLMKLYRYLWGTSTP 1069
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: A0A152A7M8_9MYCE (Transcription initiation factor TFIID subunit 2 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A7M8_9MYCE) HSP 1 Score: 69.3 bits (168), Expect = 5.800e-9 Identity = 51/200 (25.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query: 127 LLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIASINGAIAQARIWLDLDMLGVATGRSAKQSERRTKSHNGVVSACALQCLCQLELLRGGTRPEVDYEAFTSRRHPTAVRITAVQSMIQLYLAYDRGIADNAPAEGLSCALLWVLDFVESET 726
L PN F+D + Y ++K++ A + M+ R+G TP+E ++ L+ LL++N+N N +D+YY+ ++ A+ V T ++ I + Q +L D L S + T + + + + C QC + L + + Y F VR A+Q + LY + + NA A ++L+ E+E+
Sbjct: 790 LAPNDFQDFSSYFIRKTIPMAVSLMKDREGRTPMEGIEFLLALLKDNNNSLNKYSDNYYLESLILAISNVHTTNQS-----HIKKLVKQVNRYLKFDQL--------YPSFKNTVTQSCLKALCEFQCSKMIPLDFQVFKNHLQYSNFEE------VRKIALQCIYTLYYQFSSTSSQNALAVKNYSLTDYMLELFENES 970
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: A0A2R5GG60_9STRA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GG60_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.150e-8 Identity = 86/354 (24.29%), Postives = 137/354 (38.70%), Query Frame = 1
Query: 127 LLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIASINGAIAQARIWLDLDMLGVATGRSAKQS-----------------ERRTKSHNGVVSACALQCLCQLE---LLRGGTRPEVDYEAFTSRRHP---TA-----------VRITAVQSMIQLYLAYDRGIADNAPAEGLSCALLW---VLDFVESETFAGDTRPRYWAIRCILDALERRPLVASHLARYQTDDPLLGECDPWAGTEFFSPKGPGRAAYRANGPLPKGFPRAQEIAERLWSLMINGTAFDQGLRHLCFQLWRDIWGLETPPCLKN 1077
LLPN F EY +K++++ A A MRAR P E DL++ LLR+NDN N D Y+ ++ A +V AG G LD + + R+ +Q + S VV+ L+ L LE +L G T P Y F + P TA VR A ++++ Y+ + ++C++ W V + S + R+ ++ +L+ H P L + + +G + P RA P +I LW+ + T +D +R QLWR IW L+TPP +++
Sbjct: 1001 LLPNDFGVPGEYAMKRAVVRALARMRARSLKPPDEVCDLVLVLLRDNDNSINKFDDGDYLQDLMVAAAEVVVNYVAGTYNEEEKG--------LDKVAESIGSKRTIRQVLGKYYAIIDHIHRYMHYDAIEPSAQHVVTVGCLRALSLLEAEGILEGST-PYFAYAVFRAPVRPENKTAAVIAAHDWGANVREEAFKAIVVAYINQRGRPTIFKASAAVNCSIEWLQVVKWLINSVAIDPCPQLRWNVVKFMLEM---------HADTITRTYPELDDHNSPSGLFYPLSDAPDDIDQRARVPT-------TDIVASLWATINESTEYDGRMRLAWAQLWRAIWRLKTPPIIEH 1329
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: I1CF66_RHIO9 (Transcription initiation factor TFIID subunit 2 n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CF66_RHIO9) HSP 1 Score: 65.9 bits (159), Expect = 7.570e-8 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 1
Query: 16 SWKGMYHLLEAFGERFEQRQQAVASGGNVAHSKASALLL------PNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALG 330
+W G++ L + F +RF + +SG + K L L PN F D +EY L+K+ + A A +R G TP++ L+ LLR NDN N +D YYVA +++ALG
Sbjct: 565 NWVGLHQLSKMFHQRFCLPISSQSSGND---GKTDELPLIRSIPKPNNFSDLSEYFLQKASVVAFAQIRDERGLTPVKIRQFLLDLLRYNDNIGNEFSDCYYVATLISALG 672
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: C7G081_DICDI (Transcription initiation factor TFIID subunit 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=C7G081_DICDI) HSP 1 Score: 64.7 bits (156), Expect = 1.820e-7 Identity = 52/193 (26.94%), Postives = 95/193 (49.22%), Query Frame = 1
Query: 61 FEQRQQAVASGGNVAHSKASALLLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIASINGAIAQARIWLDLDMLGVATGRSAKQSERRTKSHNGVVSACALQCLCQLELLRGGTRPEVDYEAF---TSRRHPTAVRITAVQSMIQL 630
FE V+ + + S L PN F+D Y ++KS+ + + ++ ++G TP+E ++ L+ LL++NDN NT +D YY+ +L+A + T E L + I +A+ +L D L S+ V+ L+ CQL ++ ++ ++D+ F ++ H VR A+QS+ +L
Sbjct: 797 FEGLNVLVSYFKGLFFDRDSNQLKPNSFKDFNSYFMQKSIPLSISLIKDKEGRTPIECIEFLIELLKDNDNSLNTYSDCYYLEALLSAFSNIHTTNE--LLLKKIKKQVAR---YLKYDQL--------------YPSYRNCVTIGCLKAYCQLYSIKN-SKDDLDFTLFKEYSTYSHFEEVRKVALQSIYKL 969
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: A0A8H7SEW7_9FUNG (Transcription initiation factor TFIID subunit 2 n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SEW7_9FUNG) HSP 1 Score: 63.9 bits (154), Expect = 3.290e-7 Identity = 59/235 (25.11%), Postives = 108/235 (45.96%), Query Frame = 1
Query: 16 SWKGMYHLLEAFGERFEQRQQAVASGGNVAHSK--------ASALLLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIASINGAIAQARIWLDLDMLGVATGRSAKQSER-RT-----KSHNGVVSACALQCLCQLELLRGGTRPEVD-YEAFTSRRHPTAVRITAVQSMIQLYLAYDRGIADNAPAE 675
+W G++ L + F + R SG + A A+ PN F + +Y ++K L+ A + +R ++G TP+ LL+ LL+ NDN N +D YY+A +++ALG +A +P + + A + +D + + + ER RT +++ +V+ ++ L +L +L G V+ + +T H +R+ A S+ L G+ DN E
Sbjct: 852 NWVGLHQLYKMF----QNRYCFAPSGSGMPEDDDAEDPLTWAQAIPKPNNFSNLGDYFVQKGLVIAFSQVRDQEGVTPIRVRQLLLDLLKYNDNIGNEFSDSYYIATIISALG------DAFIPSHENSNSDA---MQIDNEENEQLLAAAVSEIERFRTLDCVIPTYHNIVTVSCIKALTKL-MLNGMLELSVNLFLQYTRYGHYLGIRLCAFDSLFVLC-----GLTDNTLTE 1067
BLAST of mRNA_H-paniculata_contig4121.10612.1 vs. uniprot
Match: A0A077WBH9_9FUNG (Transcription initiation factor TFIID subunit 2 n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WBH9_9FUNG) HSP 1 Score: 62.4 bits (150), Expect = 1.000e-6 Identity = 64/237 (27.00%), Postives = 112/237 (47.26%), Query Frame = 1
Query: 19 WKGMYHLLEAFGERFEQRQQAVASGGNVAHSKASALLLPNWFEDAAEYRLKKSLIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTALGQVSTALEAGLPIASINGAIAQARIWLDLDMLGVAT-------GRSAKQSER-RT-----KSHNGVVSACALQCLCQLELLRGGTRPEVDYEAF---TSRRHPTAVRITAVQSMIQLYLAYDRGIADNAPAEGL 681
W G++ L + F R+ QQ + + PN F + ++Y ++K ++ A + +R G TP++ LL+ LL+ NDN N +D YY+A +++ALG +A +P A N A +D+DM+ V T + + ER RT +++ +V+ ++ L ++ +L G P DY+ F T + +R+ A S+ L G++DN E L
Sbjct: 821 WVGLHQLCKMFQSRYCFPQQDSPMDIDDDVPVTQMIPRPNNFSNFSDYFVQKGMVIAFSQVRDNHGRTPVQVRQLLLDLLKYNDNIGNEYSDSYYIATLISALG------DAFIP-AKENMAD------MDVDMMPVETIQDEQLLAAAVSEIERFRTLDCVIPTYHNIVTISCIKTLTKM-MLNGVLEP--DYKLFMQYTRYGNFVGIRLCAFDSLFVLC-----GLSDNKLTEYL 1036
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 549.3 |
| Seed ortholog evalue | 1.4e-153 |
| Seed eggNOG ortholog | 2880.D7G4X2 |
| Preferred name | TAF2 |
| KEGG ko | ko:K03128 |
| KEGG Pathway | ko03022,map03022 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000086,GO:0000123,GO:0000228,GO:0000278,GO:0000428,GO:0000785,GO:0000790,GO:0000988,GO:0000989,GO:0001067,GO:0001076,GO:0001129,GO:0001132,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005694,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007221,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0016043,GO:0016070,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022402,GO:0022607,GO:0023051,GO:0023052,GO:0030880,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0033276,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044798,GO:0044839,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051123,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0055029,GO:0060255,GO:0060260,GO:0060261,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070461,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1902493,GO:1902494,GO:1902531,GO:1902680,GO:1903047,GO:1903506,GO:1903508,GO:1990234,GO:2000112,GO:2000142,GO:2000144,GO:2001141 |
| EggNOG free text desc. | obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly |
| EggNOG OGs | KOG1932@1,KOG1932@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01002,ko03021,ko03036 |
| Exons | 9 |
| Model size | 1161 |
| Cds size | 1134 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4121.10612.1 >prot_H-paniculata_contig4121.10612.1 ID=prot_H-paniculata_contig4121.10612.1|Name=mRNA_H-paniculata_contig4121.10612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=378bp
MYHLLEAFGERFEQRQQAVASGGNVAHSKASALLLPNWFEDAAEYRLKKS
LIWAAANMRARDGCTPLESLDLLVTLLRENDNCENTLADDYYVAQVLTAL
GQVSTALEAGLPIASINGAIAQARIWLDLDMLGVATGRSAKQSERRTKSH
NGVVSACALQCLCQLELLRGGTRPEVDYEAFTSRRHPTAVRITAVQSMIQ
LYLAYDRGIADNAPAEGLSCALLWVLDFVESETFAGDTRPRYWAIRCILD
ALERRPLVASHLARYQTDDPLLGECDPWAGTEFFSPKGPGRAAYRANGPL
PKGFPRAQEIAERLWSLMINGTAFDQGLRHLCFQLWRDIWGLETPPCLKN
IVKEKTLGWREKLVAEDPQNFRRGYSSK back to topmRNA from alignment at H-paniculata_contig4121:627..15836- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4121.10612.1 ID=mRNA_H-paniculata_contig4121.10612.1|Name=mRNA_H-paniculata_contig4121.10612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15210bp|location=Sequence derived from alignment at H-paniculata_contig4121:627..15836- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCCAGGGCGCAGAGTTGGAAGGGTATGTATCATCTGTTGGAGGCGTT
TGGGGAGCGTTTCGAGCAGCGGCAGCAGGCCGTGGCCAGTGGCGGGAACG
TGGCACACAGCAAGGCTTCTGCTCTGCTGCTGCCCAACTGGTTTGAAGAT
GCCGCGGAATACCGCCTGAAGAAGTCTCTCGTGAGAAAAAACTTGTCTAC
TAGGGGTAGGGTTAGAGTCATGCATGCTTACATTTATGGCAGCGTGTTGC
CGTCGTAGGAAGCTAGACAGTACGTGGGAGGAGATTTCTTCGTCATTTCT
GGTTATCATTTTCTTTTTCAATTAAATAAATAAATTTCCAAGTCTGGAAA
TCTGAAAATGAATTTGATGCGGGGCGTGAAAAGGGCCGAAATTCCCAGAT
TTTTAAACTTCCCAAGGAATCGACTTCGTTCATATTCATGTCGCCTAATT
ATTCCATTTGGCCCTGTTGGGACTTTTGAAATTTTTACGCCTCAGATGAA
GGAACGGTGAAGGACCAGCTATGCCTTCATCTCCAAATTAAAATTTCACG
ATCAGCTGGCTGGCTTCACCACCTTGATCGCCTCTCTTCGTTTCGCAATT
GGCTGCCTTGATCGCCTTGATCGATTTGCTACTTTCATAATTAGCTACGT
TCCATCACCTTCGTCATTTGTTCACTTTCGCAATTAGTGTACCTGCCTTC
ACCACCTTTACTGCAGTGAATATGAAGATCAATATAGGTAGTACCTTCAT
CAGACCGCTCCTTTTATCATCCAAGGCGTGAAAGGTCAGCATATATCCTT
ACTGTTCCACATGTTGGGAAAATTAGATACTCTCTGAATATACAGTTCTT
TCTTTTTTTGCAAAACATCATTTTTGAAGCAAATACACATGCATGCGTAC
AGTTATATGCACATCTCGATTTGTTTACTGGTTGGAACCTCAGATTTAAA
GCAGTGGTCTAATCCAGGTGCTAAACTTCAGTGGTTTTCATTGAAAGTTT
AGATTTCACAATTAGGTGCCTTGATTACCTGCATGGGATTTCTACATACG
CAAAATTCTGACCTTGAGGCTTTGATGATGCTCAAACCACGTGCCGTGAT
TAGCTCACCTTCATACCTTTATCGCAGTTTGGATTAAGGAAGGTCAATCA
AGGCATAGCATAGCACCTTCATCGGACCGATCCTTTATCCAACGGGTGGA
AAGTTTCGCAATTTTGGCTCTTATGATTTTCCTCCCCCAATTCTCAGATT
TTCATATTTCGTTATTTCCACCAAAAACAAGCTAGCTCGAAATTCGGACA
TGACATCTACAGATATCACCCTAGGTTACGTCATTTTTCACGCCACCCTT
CTCTGTTGTAAAGCTACGTTGTTTCTCGTACCGAGAGTTGTTGTGGTTGA
AGAACTTTATCTGCTGTTAGATAGTCAAGATATCTCCTTGGTCAGATAGG
CAGGTGGATAGAGGTATGATGCTCTTTCGGTAGCGCACGGTCTTGCGGCT
AGAAGCCTTCAAGTGTGGTAGAGGCATCATGTGTATCATGCGCTATGCGT
ACGCTGATATCCCTTTTGTTTCTGACGCTGCTTCAAAGTACACTACACTT
GAGGCAAGGCAAGACAAGGTTGTAACCGTCGTTTCGGACCCAATTCTCAA
GGCAATACTCGAATAGTCTTTTGTGACCCCTCACGCTCTTCTTGGACGTC
ATGGCTACGTGCGAGCCTAGCGAGGGCCGTTCGGCGTGGATCACTGGTGT
GTTTTGGATCGGGACTTTCAATAAATGGGTTAAGATGACCAAACGCGGAC
TGTTTCTTACTCTGGCCCTGTGAAAGTTTGCTCTACTAGAAATGACACGG
TAGGTGAGTTATTGGACAGAGACTCGGCATTACATGGATCCGACTGCAGC
TGGACGAACTGGTCGGGAGTCTGAGATGTTTGGAATGGGTTTTCTTCTGT
CGTGCGCGTGTCTTTTCTGGAGTTACATCCGCTGAAATGTTTGAAGCGTG
ATCGCCTATCAACAACTTGCAGGCATAGCTATTATGCTGCTGACCTAGCT
CTTATGCTGTGTGTACTGGTTGCCGATGCTATTTGTCAGATTTGGGCAGC
GGCGAACATGCGAGCTCGTGACGGGTGTACTCCTTTGGAATCGTTGGACC
TTCTAGTAACGTTGTTGAGGGAAAACGATAACTGCGAGAACACGCTTGCG
GATGACTACTACGTCGCACAGGTAAACTTGTTCACATTTTTGGGGTCCTA
CGTATGCGTGTATCCAGAAACGAGTGTCCAAGCGATTGAGAACAACAAGG
AATTTTTCACCTAGTTTTTGGATCGATTTCAGCCAAATTCAGCGATATCA
ACGATAGAGAGCAAAGAGCCCCTAATGCCCAGTTTTAGGGGGCCCGAGTG
TATGTTACTCACCGTATTATAGTGTAGAGGCAACGTTATCAATGACATTT
CACAAGATGGTTGAGCGTAAAGAGAAAAAACGCTAGGGCTTTGCGTTCTT
ATCCAAGCCAATCCGTTTTAAGGAGAATCATTGCCAATGACGAAATATCG
CTGTTTCCAGATAGTGGCTGTCTCGCAGTTGATGTAACGGCCGTGTGTAA
CCTTATCATGTAAGCTGAACTTTGTGTCCAATTCGTTGCTGACAAGTATT
TTACTCGTTGGGGCGCCATTCTCAGCCCACGGCCTCACTGCCTGTTGATG
TCTGTCGATGCTGCCCATAGCCATAGCATGCCGTATTTTTTGGGTGGTGT
TGACATGGCAGAGGTGTAGATTGTGTTGATGATATTTCTATTGAAGGGAT
GTTGGTCCTCACGTAGATGCGGCCTGCCTGACACTTTGGTGTCAGCAGTG
ATTTTTATGGTAGTGATGTGATGTGGTGTGATGTGATGTGATGTGATGTG
GTGTGGTGTGATGTGATGTGATGTGATGTGATGTGATGTGATGTGATGTG
ATGCCATGAAAATTTCGCCTTCTTGATGCTTTGGTGTCAATAGTGGTGTT
GATGGTTTTGATGTTATGTTATTGCTGATGAATATACTTCCTCCCTGATG
TTTTGGATATCAATAGTGGTATTGGTGCCGTTGTTGTGGTGTTAATGCCG
ACGAAGATACTGCTTGCACGATGTTTGGTGGCAATGCAGGTATTGACAGC
ACTGGGGCAAGTGTCCACGGCACTGGAAGCGGGCCTGCCGATTGCTTCTA
TCAATGGCGCTATTGCTCAGGTACCGCGTAGGGTGAAAGTGTGGTAAAGC
CTCACGTGTCGCGGTCCGACGGCTGCAACATAGCAATCTGAAGGAGATGT
TTTGTTTTTGACCGATATTCCATGTTCCAATCTATCCGACGCCTACCGCA
GTTAGTTTTATCATTACTTCGTCCCTCTCAAGAGACCAGGAGAAAGTGAG
GGGGGTACCTTTGGCCTATTTGGTCGGTTTGAGGGGTTTGGAGGAAGTGG
GAGTCACTTTCTCTCGCAAACAGTTCTCCATAAGTAGTACAAAGGTTTTG
TTTCGGGGAGAAAGAAACCAGATATATACTCCTTCCGTCCCATACGTCTA
CGACGTTGAGGGTATAACTTGTTGCGATGACCTCAGAATCAAAAACGTTT
TTTTGCGTCGGATTCCTTGGTGTTTTTCACGTTAATTTTGTTATTCACAG
CTTTCCTCGTTCCCATTAATCCACCATCCTACCGCCGTGCCGAAAGCCTC
TCGGTCGATTTTGACCGATTGTGGCAGACTTCCCGCCCGCTGCCTTTTCT
TGGTTTCCGTGTTTTGCACCTCGAAATGGTTCCCTCCTAGCGCCTTCAAG
ACCTGATTGTACCGTTTGAAGAGGCTCTTCCACACCCTCTCTAAGGTTGC
CGCGTCGTGCGCATCCTACATGTTCTTTACCCCCTCCACAAGGCCGTCTA
TCGTGTACCGTAACGCTCCTCCAAACCTTACTCTTTAGAGATGTAAAGAA
CCCCAAATCGTTGAATGTCGAGATCTGGTGAGTGCGCAGGCTCAATTTCG
AGATTGACGTTTCATCCCCCGTCCCTCCGGGGTTCGTTTGAGCTTCCGCG
GCGCGTCTTTCCCCGTGTGGGGGGTCGCTCTGTCCTGCTGTGCGGCCACT
TCCTCACCCTCCAACCATGGCATCCTTTCCTTCAATGCTGGCAGAAAAAA
GTCCTTACACCACTGATGGTACCACTCGGCATCAATGGTCACGTCGAACC
CGTATTGCTGCCCCCGTTTACACCGGGCCGAGTTCCTCTGCGCCTGCTTG
ATTACGCAAATACGCTGGATTCCAATCTTGCTGTCGAAATCGCTGGAAGG
ATCTGGATGCGAAAGGGTGTTGCGATGGTCCATGTGTTCTCGTACACGCG
CCCAAAGTTGTCTGGGATATTGGTCGCCAACTCTAAACTTCTCCAACTGG
CCCAACGCCTTTCGGAGGCTGTTTCTTACCAAGCGGTAGCGTTAAAGCGT
ACCGTACGGTCAACGTGTTTTCAACTTCCTCGGTCAGCTCGCAATTTTTC
TCCGGACTTAATCAGCCCTCGGCAAAAGAGGCCGGACTCGCCGGAGTGGT
AGTGTTGTTTGCGAAACTCGCGCCGCAGACGGTCTGGAGGCTGCGCGAGG
GTCGTACAGGTCTTGGCGAGGTGCTGAGATGTTGTGTGACGATAGGGAGG
GCATTTTATCCACCGCCAGGCGCAGCGCAGCCACTCAAAATGGAATCGAA
AAGGACCATGTTTTTAGTTCCTCTTCTCGCGAAGTTTTCGGAACTATTTC
GGAACTATTTCGGGACAATATGCGAGAAGAAATGATTCTTCCTCAAGTTT
GCGTCCATAGGTTCAATTCAAGCAATACATGACCGAAACCCTCTTCGAAT
TCGTAGAGAAACGGCCTGCACAAGGAATGAGAAATCATAGCGTCACAGAC
TTACGGAACGGAGGGAGTATACATATGTATATTTATATATATATATATAT
ATATATATATAGAGAGAGAGAGAGAGATGTATATATATATGTATATGTGT
GCGTGGAATTGGAGTCCGTTCAACTGGCAACTAGTGGAGCGAGATCACTG
CCCACAAGAGTGTCTTCCACCTGAAAACAGGGCAAGATTTCGATTTGAGA
TTTTCATATGCTAAAGTCGTGGAGAGGACGAGCACGCACTCCTTGTCTGA
ATATTGAAAATAATTTTCTATTTGACAGTGTTCACGCTCCAATTGCTCAA
TTGTGGTAGCGTGGGCCAACACGGACACACATATTCCCTTCTTCTGTCCC
TGTCCTCTTGAGTGGTGAGACTAGATTACCTAGTACACCCCCAAGACGGT
GTGCTGTTCGATTAATCGAATAACCAGAAGTCGTCGACGATAGCCAGTGT
GAATAGTAGTAAAGTACCCACGAATCAAAATCTTTTGCAAAAAACACGAA
TACAAGTATCGAATCCACGTGGTTTCTCAATTCCGCCGCGTTTTTCGAAA
CTTGACGCACACGCCGAGTAAAATAACTGAGGGCGTAGGGGACGCCCAGA
CCCCCCAAAGGTATCGCGTGACCCGCTGTTGACCAGAGCATCAGGGCGAG
CAGTTTGTATAGCGAGTGAGCCAGATCCTAACGACCCCGAGGACGAAGGC
CGAGAGAGTGTGGCGGTTAGTCAAACTACGATACGGATCTGGCTGCAGAA
GCTTGGCTATAGCCGCCAAGAATCTAAACCTGGGTTCAGTAGGCACAAGA
AATAGATAATGGGTATGGAGATATCGTATTCCCCATCCGTTTTCATATTC
TTTGGGGATGGGTGTCGGGTGTGCAGATGGTCGACAGGGGCGGGCAGCAA
AAGGGGGCACCGATGTCAGGCAAGAGTGTTGTGTTGGATAACGACGAACG
GGATAAAACGGCAATATGTTTTCGGGGGTGGGGCACAGTGCCGTGCAAAT
GCAGTAGGTCAGTGCTGCAACGGCAGCAGAGGGGGGGCGGGGGAGGGGGC
GCCCATGAGTGCGAGAACGGTTGAAGAGTAATCACTGTGCGTACAGAAAG
GCATTAACTGTAAGTAATCTCAGCTTCAAACCATAAAATGTTGCTTTTTG
TAGCCCTGAAACGAGTATGAACGAAGTGAGGCTCATGCCTCACACTGTCA
CCGATTTGCATGTTAAAATGCGTTGTTGTATTACTACTGAATAAATGTTG
TTCGGCACACCCATAAAGCTGGTAAAATTCCAGAAGAAACAGGCGCCATT
GCCCTCGCCATGGCTTGAACTTACAGGTATATCGCACACCCTTTTCCACA
ATCCAATATTCGTATACAAGACAGTAGTGCCGACGATGTCACGAAAACAA
CAAAATATGACGAAAGTAACAGCAGCCCAGATATCGCACGCTCAGTCAAT
ACACGACATATTCACGAAGGCAGTAGAACTTCTACATTAAAGTGTGCAAC
ATCGAAAACACCAATTCATGGTACACAGCGATAAGAACCTTCGACCCGAA
CCCTAAACCTAACCTGTCATCTCCTGTAGACGCCCAATGACTCTACAATA
CTGTATATCAAAGACCATCTGGCAAAAAAACATCAATCGCACGCGAATAT
ACGTCCTCTCGCTGTTCTTAGCTCTGCCCATTTGGGATGTCCTCTCTTCC
TTCATTGATGCCATCCTCGTCTACTTCGACCAGGCCGCATTCCTTGCTGA
CCTGTACATCTCTGGCTTCTCCTTGAGGTCCTCGTAGCACCCGCGTGGAA
ATTCGTCGCGATCGATGTATTTTTGCACTTCCTTCAAACTGTAGTCGACC
AATTTCTGGCAGTTTGGCGCACCCTCGAGGACGTCATCTTTACGTGTCCC
GTACCACCCGTCACGAGGCTGAGCCCAGGCCTCCTTCATCGTGCGGTGCA
GCTCGTATATGCAGGCAACGCAGTTCTTCTCATGGGCCCAAAAACGCTCG
ATGGGCTGCAGAGCGGGGTAGTAAGGAGGAGTGAAAAGGAGGTAGCCGAG
GTCGTGGTCCTGTGTTCGTCGGCCACGAGAGGCCCAACCTTCATTATAGC
ATGCACAAAAATGATACGCTTTTGTGCCCTAGAAGTCTCTCGGATACTCG
CGTATTCTCGCTTGACGCACGTCCGTCTCTTCACGGTTTCTAAGCTCCTC
ATCCACAGCCTCCGGTTAGTCGCTCTTTCCTGCTTGGCTTTTTCAAACAA
AGCTCTACTACGCTTCATGGCTTTTATCGTCTTCATCGCTTTCCCCCCAG
CACGTCCCGCTGCGGCTCGCTGTTGAGTACGCGCAGAGGGTTTCGGGATG
GCGCCCCCTGAGGTACGTACGTTTCGGCGACGTGGTGACATGTGATGGTG
CCCGGGCAGGGTGCGTGGTTGTGGGACCAGCGTGCGTGAAAGCGGCCAAC
GATTTCGTGCATGTATCTTTCCGCGCGGTGTACGCGCGGCCTATCTTGCG
GAACGTTACTGTGGTTGAACTGCGCTGCGTCACTCGCGGTTAAATTAGAG
AACACTCCGACTCGAAGACCGCCTGAGGCCGCCGAAAGTGGCGTGGTTGA
AAAGGCATCTTCCAACACAAAACATATGCGGGGTCCCCCGGAAATGCGGG
ATCTACCCTCCCGACAAGTTTTGCACCACCCGGAGAAGTACGAATACTTG
GCGTGTTCGCCACGAAAATGATAATTTCTTCGTGTGAGTTTCAGAGGTTC
AGAATGAACAGACAAATAAAATAGAGTACGCACCATGTCTACTCGATTTA
CGAGTATTAATAGCAGTTGTGAATGGTCCGGGGCACATAAAATAAATACA
CAAGCTAGCTCATTCTGAACCTCACGCGGATACTTTCGGTATTTTTTTAA
GCCATTTGCAAGTATTCGTAAAATTGTCTGGGGGGTTAATTTTTGTCGCC
ACAAATATCCAAGAAAAGATATCAGGGGGTGGTAAACAACGTGATGTACG
AATCTTACTCTACAGCCCAGCAGCACAATACAGCAGCGTATGGCACAATG
CAACATAGACATCACAGACAGATACAGCACAGCGCTGTACAGTCCCAGTA
CATACAGGTATAGCGCCATGCAGTAGCGCAGCAGACAACAGTGCGGCCTG
CCGATATGCACTGTACTGTACTGTGCGTGCACCCAATGTGATCAGTAGCT
GTTCGGGTGATTTGAAAATTGTCTTCGCTGGCGTACAGTACTGTGCAGAT
TGTTTTGGACTACTGTACTAGGTTCAGTATATGCTTGCGATTCAGATCGC
TGCCACCACTTGAAATGACAAAACTGGGTAATGTCGCTGGGTAATGACAA
GCAGGCGAATGCTCCTTTGCAAGGGATGCGACTACGTCGCTTGTACAGTA
TATTACACTCTCTGCCTGTATCCAAAACCTGCTCTCACCAATTGATTTCA
CGTCCTGTTGGTGCTATGCGGACGTCGTCGTGGCGATCGAAATTCCATGC
TTGTCGAAGCTTGCTGACCAAATGTTTTGCCCAGTAGTGGTACCTTGGAG
ACCCCAGGCCGCGTGCCGTGCGCGTGCCAAAGCCCGGAGGCCTGTACTGG
CGCCTACTGCGCACCTGGCAGCCCCCCTTCCTAAGATATGGCCTGGCGCC
TTAGTGAGACCCTGGGGATTCGGTATAATCCTTGCCCAAGTCCCGCTGCT
TGCCTTGCTATTCGATTGCCTCGCTCTCGCTATACAGCGGGCTGCACAGA
AAACTGGAGGCGTCCCGTGAATCTGCAAGTCGTCGCCGACATTGCTGATG
CGCTATATGCGATGATTACAGCGATGTGTGAAAGTGTACCGCTATTCAAC
GTCGAGCATGCTGTGTTTTAGGGGTTATGTTGGGTTATCCCGAGTGTGCT
CGCACTCCCGGCCACCATTTGCTATACAGACTGCTCGCCCTGATGCTCTG
GTCGACGGCGAGTCACGCGGTCTGGGCGTCCCCTACACCCTCAGTTATTT
TACTTGGCGTGTGCGTCAAGTTTCGAAAAACGCGGCGAAATTGAGAAACC
ATATATCACGCCGAAGGGACTCAAGATCGACGCTATTCGTACGGACAACA
GCGTGGAGTTCGACGGCAATTTCACCTTAAGCTGGACGAGCACGGCATTA
GTCACGAGCTCACACCTCCGGACACGCTGCAATACAACGGCGTTGCCAAA
AGGCGACTGAGTCTACTTCGCGAGAAAACGATCGCGTTGATACGGGGTCA
GACGGAGGGGGGCAGCGAGAAAATATGGGCGGAGGCGATGGACTACGCCT
ACGACATCACCAACATGAGCTGCACCTCATGAAATTGAGAAACGACGTGG
ATTCGATACTTGTATTCGTGTTTTTTGCAAAAGATTTTGATTCATGGGTA
CTGTAGTGGCCAAGCGATACCCCGAAACCTGTGACAATAATTGGTCATTA
TCCAGGAAGTATATATAAGCAACATATGAGTATTTCCCCATGTACGGCAT
TTCTTGTGTAAGTTTCTATTCTCTGACAGTAGATCTGCGCGATTGGACTC
AAGAGCTGAACAAAAATAAATTACGTGCCAAATTTTAAATACGCATGACA
CTGTGACACGCAAAGGTGCATGTTTGCATCAGTGGTAATATTTGACGATG
ATAGGTTTAGCATAGTTTGTTTCCTCTCTTTTTCTTCGTGTTTTTTCAAG
GCCCGAATATGGCTGGATTTGGATATGCTCGGGGTGGCGACTGGGCGGAG
TGCAAAACAGTCGGAGCGTAGGACTAAGAGCCACAATGGAGTTGTGTCGG
CATGCGCCTTGCAGTGCCTCTGCCAGCTGGAGCTACTGAGAGGCGGAACG
TGAGACTTGACAGTATCTGATTTCTTTTTAATACGCTAAGGCTCTAGCGT
TTTACTGTCCATGGTGATTTCGGTTTTGTCTTGGAAGCGTTTCAGAAACG
AGGTAAATGAGCCAATCACAGGCGTGCCCTTGATGGACATGAATTGCCAT
TGGACGACGCTGTTGTTTAGCCATGAACGTGTAATTTTAGGAAATAAACC
TGCTCGTGTTTTTTATTACATTTCGTTCATTATTATTTTTTGCTTTCCGT
GGTCATGAGCGTGTTGCGGCATGCTGATAAAGGAACCTCGAAGCTACTTC
ACGCGGGATACGTTTCTCTAGGGACCCTTCGCTTGACAGTAACGACTTAG
TTCGATTTGAGCTTTTCGATACTTGTCGACAGTGTAAGGCGATCAATCAG
TCGTATGTAGCCGTCGCCTGTGCGAAGTACCCATTTTTTGTATGTCCTTT
TTAGATGCCCAGAAGACCAGCGCAAAAACCTTTAAACGCTGATACATTCT
TACGCCGGGCGATGGCGTCATAGCTTTCAGCGTTCGTGCGCCGGTTCTAC
ATCATCTTTGCATATATGTTCGCCTGTCCAAAGTATCTGATCTCCGTAGA
TCCATTTCTTGGAGGGGATACAGCGGAAATAGACGCCTATGGGTCGCTAT
CAAGTAAAGCACGTAAGTAGTGCTGGATATGAGTCAATGAGACTCGTACC
CACGAAAACCCTTGCGTGATAAGCATCTGAGAACTGCGTGGCGGACGTTT
TGGTCCGTTGAACTGTTGTTGAAAGCAGACCTGAGGTTGACTACGAGGCG
TTCACCAGCCGGCGTCACCCTACTGCGGTTCGCATCACTGCCGTCCAAAG
TATGATACAGCTGTATCTCGCCTATGACAGGGGTGAGCCATGCTGTGAAC
CATGCTGCAAAAGTACTGAAGACCTTCGTCGTCCTAAGTTGTTGGGTTCT
CCTGCTGTACTGCCAAATTTTCGTCTTGTTGCAAAGAGCATCCAAATAGT
TACGTGAAAAAAAATCAAACACCGAGTACTGTGGCAGAGCAGCAGATATA
ACATTTTGGACAGACGACGGTTTTTGTCGCTGGCTATAGTCCGTGAGGCT
CGAATGTTGGTCGACGTCCGACTCGATGTGTTTTTGTGCCAGTGTCGTGC
GTGTTGTGGGTATTTGGTCTATTTTGTTTTATCCTACGTGCCGACCTATA
CCATGTACATGGTACTTTCGGTACACTCGTTTTATTTTATTCGATCGTGG
CGCTCCACCAGCTACGTACACAGTACAAGCAAATAGTACTTACCCATGGA
TTCGTTTTGGGTTTCAATGGTTGCATATATGACGCTTAAGATACCGTGAG
CTTTAGAAGCGCGATATAACGTGTGCAGCAGTCGAGGACAGTGCGTAGAG
TTTACGATAGTTTTTGTTGCAGCAGCAGCAGCAACAACAGCAGTGGAACT
AGTTATTGTAGCAGTAATAGTATGCCAAGGCTGTTTGACCGTTGGCCTAA
ATTATGACTTGATTCCCGCGTACAACCTTCACTGCAACGAGTTGTCAATG
CAGTATTGGAAATGGCGGGTAGGCGACACGATCACTTTGCTGTTTTTTGT
TCAATAAAAGGAGCACAGAACGGGCAACAACAACAATGTGCCTTGTGAAC
TCACTTCGCTACTCAACTGCAATCTTCTCTTCCGCTTGTTTCACTCTAGC
CTAGTATGAGCAATACCTTTACAGTTCGATCGATTCATCTGATTGCATCT
CCTGGCGGGTGCTGCTTGTTGACATGGCAACGGGTGCAGTCCGTACTTTG
GTTATGACTGTGGCTGCTCTGCTACAGAACGTTTTAACTTCAACATTGCG
AACTGTGAAGGTTGAAATTTCTTCTGGACCAAGTTCTTCTCATAGATGCC
GGAGACGAGTCGGGGGTGCCTATCGTTTGGTGGACAAGTACAAGCTCCGT
ATTGCTGAAATGGAGCAGGGTTTATTTTCATGTATCCTAAGGTAGCTACG
TACGTCGTACACGTTTTGCTGGGTATAATGAACCGAAGATGCCCGCTAAT
ATATCTAGAATATACGTAACCGTAAATACAGATTGATTTTCTATTTAGAG
CTCAAGGCATCACTATGTTATTTTTTATGAATACGGCAGTTTATGGACTG
TGCCAATGATACTGATTTTGTCAAGGAACAGCAGTTGTACGGTCAACAGA
AACGCCTATCTGATAACAAATACACGCTGACGAGATTGATCTTTCCAATG
ACACAACTTTCGGTGTCATGAGCACCACATTTTTCGATTACAATTGAGTT
TGAAAAATGTGTATCGCTGGAGGCGATAAACTCTGAAGTACGACGGCTAT
GGTCGTTGGGTACGCTGCGAGGCTATTTGGATCGGATATGTCAGACTGTT
CCAACAAACAATAGCCACCATCACCAGAGCTCTTCGAACACTTGGATTAT
TGGTGTATGTGCCGTTGTTTCAACAAGACCCGTGATCACTTCCCTGTTTT
CCCCAGAAGAACAAGGATTTTAGTCTCACCCACTGCGCGTTTCTGTCTGC
CTACCTGTCTTCTCTCTCTCTCTTTCTCTCTCTCTCTCTGTATGTGCGTG
TATGTGCGCCTGTCTGTGGATGTGTCTATCTGTGGGTGTCAGGTATCGCC
GACAATGCCCCAGCAGAAGGACTCAGCTGTGCCTTGCTCTGGGTGCTGGA
CTTTGTGGAGTCGGAGACATTCGCCGGAGATACACGTCCGCGATATTGGG
CCATTCGATGTATCCTGGATGCGCTGGTGGGCGATGAACTTGTCGTGGTG
ATGTTTACCACGAAGCGATTGTTAGGAGAATGCAGCCGGCTGGAGAAGGC
ACATAATCTGTGTTGCAGCCTGTAGCAGGTCTAAGAAAAATGGGTGACGT
GACGTGTAGTAGAATGCTTGACACCAAATACGTGCTTAATGCGCCTCTAC
AGACAGTGAGCACGATTCCCATGGGTACGTTGCAAGTTTGACGCTCAAGC
AATTACAATGTCCATCGCCATTGTGCCATCAAGAGGTAGAATGTTTTCAG
TTGGAATAAGATTGGAACCCAAGATAGTGCAAGTTGAACAGTCTCACGCT
GTAGAATAGTACACACGTCCAAGTTTTTATAGAAGAAGGAGTTTTAATGA
GTTGGTCCATCAAGCAAGGCGAGAAGCGTTAGCATTTCGAACTGTAAACC
AACTGTACTTTCTCTGTCTGTGTCTCTGTCTGTGTCTCTGTCTGTGTCTG
TGTCTCTGTCTGTGTCTGTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTG
TCTCTGTCTCTGTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTACGTTTG
GTTTTGGTTTTGGTTATGTGTTCCCCGTGTCACCTCTCTCAGCGATCACA
GCACATCCACGCACGGATTTTCGGTGGCCTCGTTTCTGTTACCGACAATG
CCGTGTGCCGTGTGCCATTCAACCGTTCGTATTTCGTCGTGACGTTTTTA
TCTCAGGAGCGTCGACCACTCGTGGCGTCTCACCTGGCACGGTACCAAAC
AGACGATCCGCTGTTGGGAGAGTGCGATCCCTGGGCAGGAACGGAATTCT
TTTCTCCGAAAGGACCCGGACGAGCAGCGTATCGAGCGAATGGTCCTTTA
CCGAAGGGATTCCCCAGAGTGAGATTGGACAGAGGCCTCCCTCCCCCACA
CAGGGCTGGAGCCTTTTCATAATTTGTTTCTGTTTTTAAGATTGGTTCAT
CTTTTTTTTTTCCATTCTTCATTGTTAATTTCGTTTCCAATTTCGTTTGT
CAACGTTTATTTCATTCTATAGTTGAGATTCAGTGGTTCATTCGGCGGGC
ATAGTGCGAGTTGGTCATACATAACAGGGTTCGTTGGCTGTTGCTTGGTT
CGGCGTTCGTTCCAAGGCTTTCACGATTGTTGTCCTTGTTCATGAAAGGC
TAGGCTCTGTGTAGAACGGAAAGCTGGGCTTTGCGCTCTTTGGTCTTTGA
TGTTGTCTTTTTGTGCTCTTATACTCCGTAATCATTGACAGCGTATTAAC
ACCACGATATGTTGCCGAAACGAAACCTATGACCAGTAGTGCAAAGCGAG
GCTGACCAACATGTTGGCACTCTCATAGAGCAGCTGCTCAGCATGTACGG
CGCTTGCAGGAATTATGCTATCATCATACTAGGCCATGACAGGAGCTTAT
TTCCTCTTATTTACACTGCGGCCTTTTCCACGTGTTTTTTTCTTCAAGTC
GTGGCGGAATGTGTATGTATATTTGCATGTAGTTGGCAGTTCTTGCATTC
CCGATCAATTTTTCGATACAGCCGAATATGACATCTTTCCGCATCACCCG
CCTGTGTTGTTTGATCCCACTCAACTTCTTTTTCTCCTTGCAAATGTCTT
TGATCTCGTTCGCTCATGTCGCATTCTCGTTGATCTCGTCACGTCGCGTG
TCTATTCAGGCCCAGGAGATTGCGGAACGTCTTTGGTCACTCATGATAAA
CGGAACGGCTTTTGACCAAGGCCTCAGACATCTATGTTTCCAGGTTCGTA
GAGTCTACTGTTGTTTCTTGAAATCGTCCGACTGTTTTGGTTGACGTTTG
TTGTGTGCTGAGCGCAGTAGGTACTTTTTTATGCAATGCATCATGATGAC
AGTGTACAGAAACACTGAGCTACACAATCAGGGCTGACTGTGTAACTCAG
TGTTGAGCTGCTTTCTGTCCAAACGTTTATGATGAGGTCCGAACAACCGA
CCATTTTCACTCCGAGGAGGGTTACTCCCCTTGTCAGCGCTCACAATACT
TTCTGATTCGTCAATTCGATAGACCGGTCAATTTATTCCTGAGTATTGTC
TCTCCACGACACCTCCAGTGCCGCACTTTCCACATCCAAAGCGCACAAAG
AAAATCTGTGTCGGGAATCGAGCTCATGATTAACTTTTGTGCAGCTACAG
AGTCAGCTTGGGATTCGATACACCTGCGGGGGTGTTTGTTGAATGATCGC
ACAGCAGGGTCCACTCACCACACGGATTTGGAGCTTTTTTTTCGCACTTT
GCTGCTCACTCTAAGCATTACTGTACATTGCTGATCTTCTTCACCCTAGT
CAAGGGACTCGTGATATTATAATCAAGGGACCTGTGATACTATAATCAAG
GGACCTGTGATACTATAATCAAGGGACCTGTGATACTATAATCAAGGGAC
CCGTGATACTGTGGATAGCGCAGGTAGTAAATGGCTGCCATTGCTATTTT
CGCTGGAGCCGTTTCGTGCCGTTGACGTTGTTGCTTATAGTTTCTCTGGG
TTTGCATTGCCGTTGCATAATTGACCAGTTGTGGCGAGATATATGGGGAC
TAGAAACGCCACCGTGCTTGAAGAACATCGTGAAAGAGAAAACACTAGGC
TGGCGGGAGAAGCTCGTTGCCGAAGACCCACAAAATTTCAGGAGAGGCTA
CTCCAGCAAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig4121:627..15836- >mRNA_H-paniculata_contig4121.10612.1 ID=mRNA_H-paniculata_contig4121.10612.1|Name=mRNA_H-paniculata_contig4121.10612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2268bp|location=Sequence derived from alignment at H-paniculata_contig4121:627..15836- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATCATCTGTTGGAGGCGTTTGGGGAGCGTTTCGAGCAGCGGCAGCA
GGCCGTGGCCAGTGGCGGGAACGTGGCACACAGCAAGGCTTCTGCTCTGC
TGCTGCCCAACTGGTTTGAAGATGCCGCGGAATACCGCCTGAAGAAGTCT
CTCATGTATCATCTGTTGGAGGCGTTTGGGGAGCGTTTCGAGCAGCGGCA
GCAGGCCGTGGCCAGTGGCGGGAACGTGGCACACAGCAAGGCTTCTGCTC
TGCTGCTGCCCAACTGGTTTGAAGATGCCGCGGAATACCGCCTGAAGAAG
TCTCTCATTTGGGCAGCGGCGAACATGCGAGCTCGTGACGGGTGTACTCC
TTTGGAATCGTTGGACCTTCTAGTAACGTTGTTGAGGGAAAACGATAACT
GCGAGAACACGCTTGCGGATGACTACTACGTCGCACAGATTTGGGCAGCG
GCGAACATGCGAGCTCGTGACGGGTGTACTCCTTTGGAATCGTTGGACCT
TCTAGTAACGTTGTTGAGGGAAAACGATAACTGCGAGAACACGCTTGCGG
ATGACTACTACGTCGCACAGGTATTGACAGCACTGGGGCAAGTGTCCACG
GCACTGGAAGCGGGCCTGCCGATTGCTTCTATCAATGGCGCTATTGCTCA
GGTATTGACAGCACTGGGGCAAGTGTCCACGGCACTGGAAGCGGGCCTGC
CGATTGCTTCTATCAATGGCGCTATTGCTCAGGCCCGAATATGGCTGGAT
TTGGATATGCTCGGGGTGGCGACTGGGCGGAGTGCAAAACAGTCGGAGCG
TAGGACTAAGAGCCACAATGGAGTTGTGTCGGCATGCGCCTTGCAGTGCC
TCTGCCAGCTGGAGCTACTGAGAGGCGGAACGCCCGAATATGGCTGGATT
TGGATATGCTCGGGGTGGCGACTGGGCGGAGTGCAAAACAGTCGGAGCGT
AGGACTAAGAGCCACAATGGAGTTGTGTCGGCATGCGCCTTGCAGTGCCT
CTGCCAGCTGGAGCTACTGAGAGGCGGAACCAGACCTGAGGTTGACTACG
AGGCGTTCACCAGCCGGCGTCACCCTACTGCGGTTCGCATCACTGCCGTC
CAAAGTATGATACAGCTGTATCTCGCCTATGACAGGGCAGACCTGAGGTT
GACTACGAGGCGTTCACCAGCCGGCGTCACCCTACTGCGGTTCGCATCAC
TGCCGTCCAAAGTATGATACAGCTGTATCTCGCCTATGACAGGGGTATCG
CCGACAATGCCCCAGCAGAAGGACTCAGCTGTGCCTTGCTCTGGGTGCTG
GACTTTGTGGAGTCGGAGACATTCGCCGGAGATACACGTCCGCGATATTG
GGCCATTCGATGTATCCTGGATGCGCTGGTATCGCCGACAATGCCCCAGC
AGAAGGACTCAGCTGTGCCTTGCTCTGGGTGCTGGACTTTGTGGAGTCGG
AGACATTCGCCGGAGATACACGTCCGCGATATTGGGCCATTCGATGTATC
CTGGATGCGCTGGAGCGTCGACCACTCGTGGCGTCTCACCTGGCACGGTA
CCAAACAGACGATCCGCTGTTGGGAGAGTGCGATCCCTGGGCAGGAACGG
AATTCTTTTCTCCGAAAGGACCCGGACGAGCAGCGTATCGAGCGAATGGT
CCTTTACCGAAGGGATTCCCCAGAGAGCGTCGACCACTCGTGGCGTCTCA
CCTGGCACGGTACCAAACAGACGATCCGCTGTTGGGAGAGTGCGATCCCT
GGGCAGGAACGGAATTCTTTTCTCCGAAAGGACCCGGACGAGCAGCGTAT
CGAGCGAATGGTCCTTTACCGAAGGGATTCCCCAGAGCCCAGGAGATTGC
GGAACGTCTTTGGTCACTCATGATAAACGGAACGGCTTTTGACCAAGGCC
TCAGACATCTATGTTTCCAGGCCCAGGAGATTGCGGAACGTCTTTGGTCA
CTCATGATAAACGGAACGGCTTTTGACCAAGGCCTCAGACATCTATGTTT
CCAGTTGTGGCGAGATATATGGGGACTAGAAACGCCACCGTGCTTGAAGA
ACATCGTGAAAGAGAAAACACTAGGCTGGCGGGAGAAGCTCGTTGCCGAA
GACCCACAAAATTTCAGGAGAGGCTACTCCAGCAAATTGTGGCGAGATAT
ATGGGGACTAGAAACGCCACCGTGCTTGAAGAACATCGTGAAAGAGAAAA
CACTAGGCTGGCGGGAGAAGCTCGTTGCCGAAGACCCACAAAATTTCAGG
AGAGGCTACTCCAGCAAA back to top
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