prot_H-paniculata_contig4116.10604.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4116.10604.1
Unique Nameprot_H-paniculata_contig4116.10604.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length381
Homology
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BLAST of mRNA_H-paniculata_contig4116.10604.1 vs. uniprot
Match: D8LIM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM1_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 5.590e-97
Identity = 195/299 (65.22%), Postives = 210/299 (70.23%), Query Frame = 0 
Query:   93 METDLDFIRELTWYR-GAR--VRQDEYEFALVLKPNDEYRDAVEVLELALELRDGSSPVKKASPTKLKNARRVRESLAGMQQPPDLTTLGDNPSMTPYTSQSGLAGRKAG--PPQVRPGLSEGCEGNAGGGRRQRLSLLDDLQEEEGRLTARRKKELDRKKMNRLFHFVEKLKEGVIVRRHRAHHTCDQIVLQSTDDCRTIVWKPLLAAKNKNATAYNGGAGXXXGALVP--FLRLFRGGA-HRLHY--RAESIKTANIAVVLPATDPDPSHAGFFGTRALRLSEDIPNPARTFSLLYG 381
            ME+DLDFIRELT YR GA    R DEYEFALVL PNDEYRDAVEVLELAL+L DG   V   SP KL    +V+ S  G                         +GRK G  PP VRPGLSEG EG  GGGRR RLSLLDDLQEEEGRLT+RRKKEL+RKK +RLFHFV K++EGVIVRRH AH TCDQIVLQSTDDCRTI WKPLLAA        +GGA XXX   +   F  L RG A  RL    RAE +KTA+IAVVLPATDPDPS  GFFGTRALRLSEDIPNP+RTFSLLYG
Sbjct:    1 MESDLDFIRELTRYRSGAERAARNDEYEFALVLNPNDEYRDAVEVLELALDLGDGGGGVT-TSPQKLD---KVKRSGPG-------------------------SGRKGGGGPPVVRPGLSEGLEG-VGGGRRTRLSLLDDLQEEEGRLTSRRKKELERKKKHRLFHFVHKMQEGVIVRRHLAHRTCDQIVLQSTDDCRTISWKPLLAA--------DGGAXXXXXXAISGLFQSLRRGAAGSRLSKKNRAECVKTAHIAVVLPATDPDPSQPGFFGTRALRLSEDIPNPSRTFSLLYG 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4116.10604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIM1_ECTSI5.590e-9765.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 226..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4116contigH-paniculata_contig4116:9492..14561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4116.10604.1mRNA_H-paniculata_contig4116.10604.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4116 9492..14561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4116.10604.1 ID=prot_H-paniculata_contig4116.10604.1|Name=mRNA_H-paniculata_contig4116.10604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=381bp
TKQHVLIESPPKACACASAAVAPPTSGSHGGFARGVDDVPTSPRRTESAG
MNSHTHAAAPASAVATHASTRVELQRQGSAGSKNNSGDDEDAMETDLDFI
RELTWYRGARVRQDEYEFALVLKPNDEYRDAVEVLELALELRDGSSPVKK
ASPTKLKNARRVRESLAGMQQPPDLTTLGDNPSMTPYTSQSGLAGRKAGP
PQVRPGLSEGCEGNAGGGRRQRLSLLDDLQEEEGRLTARRKKELDRKKMN
RLFHFVEKLKEGVIVRRHRAHHTCDQIVLQSTDDCRTIVWKPLLAAKNKN
ATAYNGGAGGGGGALVPFLRLFRGGAHRLHYRAESIKTANIAVVLPATDP
DPSHAGFFGTRALRLSEDIPNPARTFSLLYG
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