prot_H-paniculata_contig4116.10602.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4116.10602.1
Unique Nameprot_H-paniculata_contig4116.10602.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
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BLAST of mRNA_H-paniculata_contig4116.10602.1 vs. uniprot
Match: D8LIM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIM2_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.750e-12
Identity = 62/137 (45.26%), Postives = 78/137 (56.93%), Query Frame = 0 
Query:    1 MSNWGDDRGM--EVGGRPMSPMGAPERDRSSRRLNQTRSLTPPPRRPVPPPKPELPMRPFQSEGVPLPRPRSVSPPRNILHSSSSSSSLSSNHAPSVTGSSLSVRMERAPISRSNSVRANARPLPPPPKTRARFAAQ 135
            MS WG  +    ++GGR    +   E+DR+SRRL  T SLT P  R   P KPELP RP   +   LPRPRS+SPPR  L              PSVTGS+LS R+ERA + R+ S  +N  P+    KTRARF+A+
Sbjct:    1 MSGWGTPKSAAGDIGGRSPRAVDGREQDRASRRLGLTHSLTSP--RAPEPAKPELPARPNSDD---LPRPRSLSPPRRNLA------------PPSVTGSALSARLERASLVRTASS-SNGPPIXXXXKTRARFSAK 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4116.10602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIM2_ECTSI1.750e-1245.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4116contigH-paniculata_contig4116:4186..5739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4116.10602.1mRNA_H-paniculata_contig4116.10602.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4116 3810..5739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4116.10602.1 ID=prot_H-paniculata_contig4116.10602.1|Name=mRNA_H-paniculata_contig4116.10602.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MSNWGDDRGMEVGGRPMSPMGAPERDRSSRRLNQTRSLTPPPRRPVPPPK
PELPMRPFQSEGVPLPRPRSVSPPRNILHSSSSSSSLSSNHAPSVTGSSL
SVRMERAPISRSNSVRANARPLPPPPKTRARFAAQLDVPVTPTGRDGSFS
FAGVTAVEEPEQAVAVAAVPAKEGKNEPARPVSPGPVSAREVATQAIEKR
MQDSGMETGGGCSTNSRAVDMRVMIERAEEEESRVE
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