mRNA_H-paniculata_contig411.10585.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig411.10585.1
Unique NamemRNA_H-paniculata_contig411.10585.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 4.440e-87
Identity = 151/343 (44.02%), Postives = 205/343 (59.77%), Query Frame = 1
Query:  202 GHVDVASRRMVPVQLKVLASSQILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGLNSRLGMPSQSR*RHTM-RWASLRQ*ARLMSL-VTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPPERVEVEDGFFSMRRKLVMHYTYRVENNEVAWL 1224
            G  D + RR +PVQLKVLA  QIL RGN F DI  +S +S  TA + FH F + FA +++       + +P+    +  M ++  L       S  VTHI WG  P +    YT KEG+PT+AY+VTVDH  RVL +T G  G  NDKSI+R+D  V  +RE  +Y    + + + DG     KG YL+VD  YH+  +L+  +K    + +L +SKRLESVRKDVECFFGI+KGRFRILKL I + +   +DNV +TCCILHNMLHS+D     + + +WAG  GL +AW H+            S+   E VEVE GF + R++L+  + YR   N++AWL
Sbjct:  143 GKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAE----HIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.340e-86
Identity = 161/344 (46.80%), Postives = 214/344 (62.21%), Query Frame = 1
Query:  202 GHVDVASRRMVPVQLKVLASSQILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGLNSRLGMPSQSR*RHTM-RWASLRQ*ARLMSL-VTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPPERVEVEDGFFSMRRKLVMHYTYRVENN-EVAWL 1224
            G  DV  R+ VPV+LKVLA  QIL RGN F DI  +S +S  T  S FH FCK FA +L+    +  + +P+    R  M ++  +     + S  VTHI WG  P +   +YT KEG PT+A++VTVDH GRVL +T+G  G  NDK+I+R+DK V  +R   +Y    YKL  +DG +  EKG YL+VD  YH+ R+L+  +K    R +L +SKRLES RKDVEC+FGILKGRFRI KL I F +   +DNV +TCCILHNMLHSFD       + +WAG  GL +A   D  T ++ + G + +G  E VEVE GF ++R KLV ++ YR E   ++ WL
Sbjct:  159 GESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELY----DEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNT-DYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 8.840e-82
Identity = 153/333 (45.95%), Postives = 205/333 (61.56%), Query Frame = 1
Query:  235 PVQLKVLASSQILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGLNSRLGMPSQSR*RHTM-RWASLRQ*ARLMSL-VTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPPERVEVEDGFFSMRRKLVMHYTYRVENN-EVAWL 1224
            P   +VLA  QIL RGN F DI  +S +S  T  S FH FCK FA +L+    +  + +P+    R  M ++  +     + S  VTHI WG  P +   +YT KEG PT+A++VTVDH GRVL +T+G  G  NDK+I+R+DK V  +R   +Y    YKL  +DG +  EKG YL+VD  YH+ R+L+  +K    R +L +SKRLES RKDVEC+FGILKGRFRI KL I F +   +DNV +TCCILHNMLHSFD       + +WAG  GL +A   D  T ++ + G + +G  E VEVE GF ++R KLV ++ YR E   ++ WL
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELY----DEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNT-DYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.580e-74
Identity = 154/415 (37.11%), Postives = 226/415 (54.46%), Query Frame = 1
Query:   13 RWVKPKEAEKGVCSWGRMLQSP-----PSHRPQFERLRSLQEALSYTLSILRGADEGG--ARRTMVSEEGGHVDVASRRMVPVQLKVLASSQILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGLNSRLGMPSQSR*RHTMRWASLRQ*ARLMSLV--THIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPPERVEVEDGFFSMRRKLVMHYTYRVENNEVAWLRS 1230
            R V+P+ A+     W RML+       PS R   +  R  +    + LS++     G      T   E GG     +RR +PV+ KVLA  +ILGRGN FDD+ +++ M E+T   +FH F +RFA ++F   +     MP++   +  M+       +  M  +  THI W   P S    +  KEG+ TL + V V H  RVL  T+G  G  NDK+I++FDK   AVR G  Y+ + Y L+ +DG +  EKG +LIVDG YH  + L    +  + + E  + ++LESVRKD EC FG++KGRFRI K+  L+ +  ++DN+ +TC ILHNML ++D ++L +PD DWAG  G LD  + +   +      H        VE +DGF ++R+KLV ++ YR     V W RS
Sbjct:   53 RTVRPR-ADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGR---GTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFACEIFPVWVR----MPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMRVLSCTRGFPGAQNDKTIIKFDKFAMAVRNG-WYKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNI-EHPVVRMSAPTHED----AVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 1.070e-71
Identity = 142/348 (40.80%), Postives = 199/348 (57.18%), Query Frame = 1
Query:  211 DVASRRMVPVQLKVLASSQILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGLNSRLGMPSQSR*---RHTMRWASLRQ*ARLMSL-VTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPPERVEVEDGFFSMRRKLVMHYTYRVENN-EVAWL-RSQP 1236
            D   RR  PV+ KVLA   ILGRGN F  I  LS MS  T Q VFH FC+ FA +++    +  + +PS+      R   ++  L     + S  VTHI W   P +    YT KEG PT+ Y+VTV+H GRVL +T+G  G  NDK+I+  D+ V  +R    Y    + +  KDG  +  KG YLIVD  YH+ R L+  +K   +  +L +SKRLESVRKDVECFFGILK RFRILKL + + +  ++D V +TCCILHNMLH+ D +   + D +W G   L +   H+  + + GT   N     ++ +VE     ++RKL  ++ YR ++  ++ WL R +P
Sbjct:  115 DAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMY----DEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLN-----DKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSRKRP 453          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 2.000e-70
Identity = 144/339 (42.48%), Postives = 188/339 (55.46%), Query Frame = 1
Query:  211 DVASRRMVPVQLKVLASSQILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGL-NSRLGMPSQSR*RHTM-RWASLRQ*ARLMSL-VTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLD--AWLHDDRTINFGTNGHNSNGPPERVEVEDG-----FFSMRRKLVMHYTYR 1197
            DVA R+ VP++LKVL   Q+LGRGN F D+ QLSLMS  TA+  FH FC     D F SGL +  + +P     +     +  +     + S+  THI+W   P S T+ +  KEG+ TL YE + DH GR+L  TKG  G  NDK++V+ D +V  +RE   + S  + L D +G      G +LIVDG YHR  SL+C  KE A+  +  WSKR ES+RKD+EC FG LKGRFR+ K  ILFG   ++DN  +T CI+HNMLH FD L   + D DWAG  G  D         T    T G          EV+DG     F   R++LV H  Y+
Sbjct:  100 DVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFC-----DCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGAFPVPTAVVDTAGE---------EVDDGDNTEAFKLFRQQLVNHVAYK 424          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 6.570e-70
Identity = 142/337 (42.14%), Postives = 190/337 (56.38%), Query Frame = 1
Query:  220 SRRMVPVQLKVLASSQILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGLNSRLGMPSQSR*RHTMRWASLRQ*ARLMSLVTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPPERVEVEDGFFSMRRKLVMHYTYRVENNEVAWLRS 1230
            +R  +PV+LKVL      GRGN FDDI QLS +SE T Q VFH F +RFA + F   +    G   +   R   +       A  M   THI +   P S  H Y  KEGF T+A+EV  DH  R LG++K   G +NDK+IV FD+ V+ ++     + + + L  +DG E  E+GLYLIVDG YH+     C  +   T++EL + K+LESVRKD+ECFFGILKGRFRILK+P+L+    ++D +  TCC LHNMLHS+D L L + D +WAG  G LD W+      +   N       P+    ED F  ++ KLV +     +   V W RS
Sbjct:  129 TRPCIPVELKVL------GRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILRE-YKDVGFGGCAGSMD-CTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKTEC--KDVPFTLLGEDGSEFEERGLYLIVDGGYHK-----CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAESAADNS------PDLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 2.400e-69
Identity = 134/364 (36.81%), Postives = 195/364 (53.57%), Query Frame = 1
Query:  187 VSEEGGHVDVASRRMVPVQLKVLASS---QILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGLNSRLG--MPSQSR*RHTMRWASLRQ*ARLMSLVTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPP---ERVEVEDG----------FFSMRRKLVMHYTYRVENNEVAWL 1224
            ++  G  V V  ++   + +  + +S   Q+LG+GN FDD+ QLS MS+S AQ  FH FC+ FA ++F   +    G  +       H + W      A   + VTHI W   P +    +T KEGFPT+AY+VTVDH GR L +T G  G  NDK+I+R+D  V  +R  + Y    YKLR  +G +++ +G +LIVD  YH   +L+  +K     E+  +S+ LESVRKDV CF        RILKL + + +   VDN+ +TCCILHNMLH+FD L + + + DW G  G  DAW HD  T            PP   E+ E  +G             ++R+L+  + +R + N++ WL
Sbjct:   13 LTRHGSRVSVCQQKHQNLCIDRIRASDVPQVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTG----ACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 364          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.290e-67
Identity = 110/238 (46.22%), Postives = 149/238 (62.61%), Query Frame = 1
Query:  511 PTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPPERVEVEDGFFSMRRKLVMHYTYRVENNEVAWL 1224
            P +    YT KEG+PT+AY+VTVDH  RVL +T G  G  NDKSI+R+D  V  +RE  +Y    + + + DG     KG YL+VD  YH+  +L+  +K    + +L +SKRLESVRKDVECFFGI+KG FRILKL I + +   +DNV +TCCILHNMLHS+D     + + +WAG  GL +AW H+            S+   E VEVE GF + R++L+  + YR   N++AWL
Sbjct:    3 PYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240          
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 3.140e-64
Identity = 132/343 (38.48%), Postives = 186/343 (54.23%), Query Frame = 1
Query:  211 DVASRRMVPVQLKVLASSQILGRGNSFDDIGQLSLMSESTAQSVFHTFCKRFAEDLFMSGLNSRLGMPSQSR*RHTMRWASLRQ*ARLMSL-VTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAGEVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGEYHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLHDDRTINFGTNGHNSNGPPERVEVED--GFFSMRRKLVMHYTYRVENNEVAWLRS 1230
            DV  R  VP++LKVL   Q+LGRGN F D+   SLMS +TA+  FH FC  FA  L+ + +    G   +   R    + SL     + S+  TH+ W     S T  +  KEG+ T+ +E   DH GR+L  TKG  G  NDK++V+ D +V+ V     + S  Y++ D+ G      G +LI DG YHR   L+C  K  A   E  WSKRLESVRKD+EC FG LKGRFR+ K  ILFG+  ++D+  +T CI+HNML +FD L   + D DW G  G  D+       +        ++   ++V  +D   F + R+ LV H+ +   ++EV W R+
Sbjct:  198 DVCGRLCVPLELKVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEG---EGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTV------ADSAEDKVSGDDDAAFHAHRQCLVDHFAFAKSSSEVQWFRA 531          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig411.10585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE4.440e-8744.02Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.340e-8646.80Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE8.840e-8245.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8I3_9PHAE1.580e-7437.11Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE1.070e-7140.80Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE2.000e-7042.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHC3_9PHAE6.570e-7042.14DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5K796_9PHAE2.400e-6936.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE1.290e-6746.22DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L0H2_9PHAE3.140e-6438.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig411contigH-paniculata_contig411:17894..21215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.4
Seed ortholog evalue1.3e-49
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1526
Cds size774
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig411.10585.1prot_H-paniculata_contig411.10585.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig411 18172..19526 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930254.8655396-UTR-H-paniculata_contig411:17893..181711622930254.8655396-UTR-H-paniculata_contig411:17893..18171Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig411 17894..18171 -
1691481212.3386483-UTR-H-paniculata_contig411:17893..181711691481212.3386483-UTR-H-paniculata_contig411:17893..18171Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig411 17894..18171 -
1622930254.9057055-UTR-H-paniculata_contig411:19526..197511622930254.9057055-UTR-H-paniculata_contig411:19526..19751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig411 19527..19751 -
1691481212.3773434-UTR-H-paniculata_contig411:19526..197511691481212.3773434-UTR-H-paniculata_contig411:19526..19751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig411 19527..19751 -
1622930254.9173188-UTR-H-paniculata_contig411:20966..212151622930254.9173188-UTR-H-paniculata_contig411:20966..21215Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig411 20967..21215 -
1691481212.3912468-UTR-H-paniculata_contig411:20966..212151691481212.3912468-UTR-H-paniculata_contig411:20966..21215Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig411 20967..21215 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930254.8789763-CDS-H-paniculata_contig411:18171..186361622930254.8789763-CDS-H-paniculata_contig411:18171..18636Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig411 18172..18636 -
1691481212.3555906-CDS-H-paniculata_contig411:18171..186361691481212.3555906-CDS-H-paniculata_contig411:18171..18636Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig411 18172..18636 -
1622930254.8925583-CDS-H-paniculata_contig411:19217..195261622930254.8925583-CDS-H-paniculata_contig411:19217..19526Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig411 19218..19526 -
1691481212.3658357-CDS-H-paniculata_contig411:19217..195261691481212.3658357-CDS-H-paniculata_contig411:19217..19526Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig411 19218..19526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig411.10585.1

>prot_H-paniculata_contig411.10585.1 ID=prot_H-paniculata_contig411.10585.1|Name=mRNA_H-paniculata_contig411.10585.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
MSLVTHIAWGCTPTSHTHLYTDKEGFPTLAYEVTVDHLGRVLGMTKGMAG
EVNDKSIVRFDKTVQAVREGALYRSMAYKLRDKDGVEQVEKGLYLIVDGE
YHRRRSLVCTAKEAATREELTWSKRLESVRKDVECFFGILKGRFRILKLP
ILFGESAQVDNVVWTCCILHNMLHSFDALKLHKPDKDWAGPGGLLDAWLH
DDRTINFGTNGHNSNGPPERVEVEDGFFSMRRKLVMHYTYRVENNEVAWL
RSQPGQK*
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mRNA from alignment at H-paniculata_contig411:17894..21215-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig411.10585.1 ID=mRNA_H-paniculata_contig411.10585.1|Name=mRNA_H-paniculata_contig411.10585.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3322bp|location=Sequence derived from alignment at H-paniculata_contig411:17894..21215- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGAAGATGAACAAGATGGGTCAAACCCAAAGAAGCAGAGAAGGGTGTATG CTCGTGGGGAAGGATGCTGCAGTCCCCTCCATCTCATCGACCCCAATTCG AGAGACTCCGGTCACTTCAGGAGGCGCTTTCGTATACCCTATCAATTCTT CGTGGAGCTGATGAAGGTGGCGCAAGAAGGACAATGGTTTCCGAAGAGGG GGGGCACGTGGATGTCGCCAGTCGCCGAATGGTTCCTGTACAGCTGAAGG TATGCAGCACGACAATAGGCAATGTCGCAACAGCGTTTCACGCTTGTTGT GCTTAATCATGCGCCTGAATAGGTCATGCTTTGTGTTGTACGTGGCAGCC AATTTCCCTCAGCTTGCTGTTGTATTGAAATGCTGTCTTACTTTTGGTGT CTTCCACCATACAGTTATACTTGACTGTAAAGACGGTAAGGTTTGTGTCT GTCACTGAGCATGATAAAAGTCATCCTCTAATTTACAGTCCAGCAGAACT GTGATGATGCGAAGCTAACTTATAATGTATATTACTGTAGTGTCTGGCCT CATTCCTGTGCAGTACAAACCGTACTGTCCTCGAACATACCGTAGTACAG GAAGTATGGCCCTGCGAAGCTGTAGTACATTGAATAATATGGCGGTGCTG ACTAATAAAAATAATGTTGTTTGCCACGAGAATTTTCTCATCCAAGGCTG CCGAATCAGCCAAGGTGCGGGGGATACAAATTGACGCATTTCACCGTCTC GACAACGTGCCGTTGGAAAATTCCAAACTGGACACCATTCAATTATCTAA GTTTAAGGTTACCCGTTAAAAAAATATGGTATTTGTTAGTGCCCATTATA AATAGTGTATTGTCCCTTCTTTCCTGTCGGCAAAGTGTGCTGCGCACACC TGAGGAGAATCGTTGTTTTGTCATTCGTTTTGCTGGGCAAATAATATCCA GACCACCGAACGGACGCCGTGAGCTTGTACCTTAAGCATGACGCGCGATG CAATACAGGATCTCCCTAACCGTTTGTATTCGGTTTCGCTATGGGTGCGT TTGGTATATTTGTTTGTTTATTGGTAGATTCGATGGGTTATCCTGTTCAA TTTCCCTGTTGTTGTCCTTCTCTTACGAGGTTACATTATCAGAGAGTGAC AAAGAATTATGCACACTGGTCACACACCGCGAAAAGAAATGCCAGGATGC CACCTGCGGTGGATTCTCTTCCGTACTGGTGTCTTAGGTCCATTGGAACA GTGCCACCTTGCGTTGCTGAGAGCGATTGATCTTCGATAAGCCGAGGTGC GTCATTGCAACTATTTTTTTTCAGCGAGGCCGTCGGTCGCACTGGGAACA TGAGCGTCATCAATCAATTTTCTCCTTGATAATATTTCGCTATCCCAGCC GCCGTCAGTACCGCCAATTGTTTCATGCGATTCCGTTACCCCTTCCGTCG CGGCTGTATCACAGGTTTTGGCGAGCTCGCAGATTCTGGGGAGAGGGAAT AGTTTCGATGATATCGGCCAGCTCTCCTTGATGAGCGAGTCGACTGCCCA AAGTGTGTTCCACACATTTTGCAAGCGTTTCGCTGAAGATCTTTTCATGA GTGGATTAAACTCCCGACTGGGGATGCCCTCGCAGTCACGATGAAGGCAT ACGATGCGGTGGGCTTCACTGAGGCAGTAAGCTCGACTGATGTCACTCGT CACCCACATCGCATGGGGTTGCACCCCAACATCACATACCCATCTCTACA CGGACAAGGAAGGATTCCCGACTCTCGCATACGAGGTGACGGTAGACCAC TTGGGGCGGGTATTGGGGATGACGAAGGGAATGGCCGGAGAAGTGAACGA TAAATCCATCGTTCGTTTCGACAAGACAGTTCAAGCGGTTAGGGAGGGTG CGCTGTACAGGTCGATGGCTTACAAGCTCCGCGACAAGGACGGCGTGGAA CAGGTGGAGAAGGGTCTTTACCTCATCGTCGACGGAGAATATCACCGGGT GAGTCACCTGCTGTTGTTTGATGATCATTGCTGCTGCAACACCCTGCGGA AATTCGTGGTATAGTTTTACGTTATGCGGCGATAATTTCATCGTTTCTGA CAAGTATACCCCGTTTAGTGTTGTGCATGAACCACACCCCACCTACAATG TATGACTTTGTTGATCCCAACGTCAACGGCTGCCCGATGTCTCATTTTTT GAGCCGCAACTCTAGACTCGCTGGACATTTTTTAAAAATATTACCACCAG ACGAGGTGCAAGCTATGAGACAACAAGCTTCCTTGACATAGGTAGCAGCT ACGCAAAATCCGTAGGTCGTACCACATGGCGTATCTTGTTTAAAGTGCAG GCCATGCCACCGTTGACAAGGACTTCGCTACGATGATAACGCCCATCTTT CTCTTGGTTGATGTCGTCTTCAGCTTCAATTTCCTCTATATACCGATGAG TGCTCACTGATCAAGGCTGAGATAAATCGTACGAGTCGGGCGTTTCAATA TCTGACACGGTTGGCCAGACGCTGCATAAGAACAACGTGTATCGACACCA CTGTTTTCTCGTTTACCTCTTGTTTGCAGCGGAGGAGTCTAGTGTGCACG GCAAAAGAAGCTGCAACTCGAGAGGAGTTAACGTGGAGTAAACGTCTCGA GAGCGTTCGAAAGGACGTGGAATGCTTCTTCGGCATTCTGAAGGGCCGCT TCAGAATTTTGAAGCTGCCCATTCTTTTCGGCGAGTCCGCTCAGGTAGAC AACGTGGTTTGGACATGCTGTATCCTTCACAATATGCTGCATTCGTTCGA CGCACTGAAGTTGCACAAGCCGGATAAGGACTGGGCCGGGCCGGGTGGTC TCCTTGACGCATGGCTTCACGATGATCGCACAATTAACTTTGGCACGAAT GGTCACAATTCGAACGGGCCGCCAGAGCGTGTCGAAGTCGAGGACGGGTT TTTCTCCATGAGAAGGAAGCTAGTCATGCACTACACATACAGGGTGGAAA ATAACGAAGTGGCTTGGCTGCGGTCGCAACCTGGTCAGAAATGATTTCAG AGTGTACATCGGGCATAGTGCTGTATGGATTTTCATGTGTCACGACGATT TATGTTGTGAGGTTTGACGGCTTGGTTGGCACGATGAGCTGTAGCAAGCG ATGTACTTGTCGACCATCGTGAATAAATGGGAGATGGGCACGGAATGGCC GCCACAACATTTTGCTAGGCATGATATCGCCCGCTCTGACTTTCCCTGAC ATGATGATTAATTTTGCTGGCATGCTGTTTGTATTAAAATTCGAGTCTTA TTCCCTGTAAGCAGTAGAGGCC
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Coding sequence (CDS) from alignment at H-paniculata_contig411:17894..21215-

>mRNA_H-paniculata_contig411.10585.1 ID=mRNA_H-paniculata_contig411.10585.1|Name=mRNA_H-paniculata_contig411.10585.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at H-paniculata_contig411:17894..21215- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCACTCGTCACCCACATCGCATGGGGTTGCACCCCAACATCACATAC
CCATCTCTACACGGACAAGGAAGGATTCCCGACTCTCGCATACGAGGTGA
CGGTAGACCACTTGGGGCGGGTATTGGGGATGACGAAGGGAATGGCCGGA
GAAGTGAACGATAAATCCATCGTTCGTTTCGACAAGACAGTTCAAGCGGT
TAGGGAGGGTGCGCTGTACAGGTCGATGGCTTACAAGCTCCGCGACAAGG
ACGGCGTGGAACAGGTGGAGAAGGGTCTTTACCTCATCGTCGACGGAGAA
TATCACCGGATGTCACTCGTCACCCACATCGCATGGGGTTGCACCCCAAC
ATCACATACCCATCTCTACACGGACAAGGAAGGATTCCCGACTCTCGCAT
ACGAGGTGACGGTAGACCACTTGGGGCGGGTATTGGGGATGACGAAGGGA
ATGGCCGGAGAAGTGAACGATAAATCCATCGTTCGTTTCGACAAGACAGT
TCAAGCGGTTAGGGAGGGTGCGCTGTACAGGTCGATGGCTTACAAGCTCC
GCGACAAGGACGGCGTGGAACAGGTGGAGAAGGGTCTTTACCTCATCGTC
GACGGAGAATATCACCGGCGGAGGAGTCTAGTGTGCACGGCAAAAGAAGC
TGCAACTCGAGAGGAGTTAACGTGGAGTAAACGTCTCGAGAGCGTTCGAA
AGGACGTGGAATGCTTCTTCGGCATTCTGAAGGGCCGCTTCAGAATTTTG
AAGCTGCCCATTCTTTTCGGCGAGTCCGCTCAGGTAGACAACGTGGTTTG
GACATGCTGTATCCTTCACAATATGCTGCATTCGTTCGACGCACTGAAGT
TGCACAAGCCGGATAAGGACTGGGCCGGGCCGGGTGGTCTCCTTGACGCA
TGGCTTCACGATGATCGCACAATTAACTTTGGCACGAATGGTCACAATTC
GAACGGGCCGCCAGAGCGTGTCGAAGTCGAGGACGGGTTTTTCTCCATGA
GAAGGAAGCTAGTCATGCACTACACATACAGGGTGGAAAATAACGAAGTG
GCTTGGCTGCGGTCGCAACCTGGTCAGAAATGACGGAGGAGTCTAGTGTG
CACGGCAAAAGAAGCTGCAACTCGAGAGGAGTTAACGTGGAGTAAACGTC
TCGAGAGCGTTCGAAAGGACGTGGAATGCTTCTTCGGCATTCTGAAGGGC
CGCTTCAGAATTTTGAAGCTGCCCATTCTTTTCGGCGAGTCCGCTCAGGT
AGACAACGTGGTTTGGACATGCTGTATCCTTCACAATATGCTGCATTCGT
TCGACGCACTGAAGTTGCACAAGCCGGATAAGGACTGGGCCGGGCCGGGT
GGTCTCCTTGACGCATGGCTTCACGATGATCGCACAATTAACTTTGGCAC
GAATGGTCACAATTCGAACGGGCCGCCAGAGCGTGTCGAAGTCGAGGACG
GGTTTTTCTCCATGAGAAGGAAGCTAGTCATGCACTACACATACAGGGTG
GAAAATAACGAAGTGGCTTGGCTGCGGTCGCAACCTGGTCAGAAATGA
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