prot_H-paniculata_contig40631.10499.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40631.10499.1
Unique Nameprot_H-paniculata_contig40631.10499.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.020e-30
Identity = 91/245 (37.14%), Postives = 132/245 (53.88%), Query Frame = 0
Query:    5 SSVKLVIAVAQ--------LDVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWY------LDEKISGLH-SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            +S+KL++AVA          DVKQA+  A+LD EV +KLP GCGD S +I +  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T   GE +W+       D +   L  S+ A+ +++   R    S + I       +T G        D   G +    A+G   ++W+S  +RPD++ AV+AV R AH P  RH
Sbjct:  829 ASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVE-RFDVKSTSRIP------ATPGADLGPKREDEEGGEWPVREAIG--SMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 1063          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.120e-30
Identity = 91/245 (37.14%), Postives = 132/245 (53.88%), Query Frame = 0
Query:    5 SSVKLVIAVAQ--------LDVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWY------LDEKISGLH-SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            +S+KL++AVA          DVKQA+  A+LD EV +KLP GCGD S +I +  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T   GE +W+       D +   L  S+ A+ +++   R    S + I       +T G        D   G +    A+G   ++W+S  +RPD++ AV+AV R AH P  RH
Sbjct: 1208 ASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVE-RFDVKSTSRIP------ATPGADLGPKREDEEGGEWPVREAIG--SMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 1442          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.140e-30
Identity = 91/245 (37.14%), Postives = 132/245 (53.88%), Query Frame = 0
Query:    5 SSVKLVIAVAQ--------LDVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWY------LDEKISGLH-SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            +S+KL++AVA          DVKQA+  A+LD EV +KLP GCGD S +I +  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T   GE +W+       D +   L  S+ A+ +++   R    S + I       +T G        D   G +    A+G   ++W+S  +RPD++ AV+AV R AH P  RH
Sbjct: 1228 ASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVE-RFDVKSTSRIP------ATPGADLGPKREDEEGGEWPVREAIG--SMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 1462          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.150e-30
Identity = 91/245 (37.14%), Postives = 132/245 (53.88%), Query Frame = 0
Query:    5 SSVKLVIAVAQ--------LDVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWY------LDEKISGLH-SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            +S+KL++AVA          DVKQA+  A+LD EV +KLP GCGD S +I +  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T   GE +W+       D +   L  S+ A+ +++   R    S + I       +T G        D   G +    A+G   ++W+S  +RPD++ AV+AV R AH P  RH
Sbjct: 1371 ASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVE-RFDVKSTSRIP------ATPGADLGPKREDEEGGEWPVREAIG--SMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 1605          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 6.990e-30
Identity = 91/245 (37.14%), Postives = 131/245 (53.47%), Query Frame = 0
Query:    5 SSVKLVIAVAQ--------LDVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWY------LDEKISGLH-SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            +S+KL++AVA          DVKQA+  A+LD EV +KLP GCGD S +I +  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T   GE +W+       D     L  S+ A+ +++   R    S + I       +T G        D   G +    A+G   ++W+S  +RPD++ AV+AV R AH P  RH
Sbjct:  420 ASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVE-RFDVKSTSRIP------ATPGADLGPKREDDKGGEWPVREAVG--SMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 654          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.850e-29
Identity = 85/238 (35.71%), Postives = 123/238 (51.68%), Query Frame = 0
Query:    5 SSVKLVIAVAQ--------LDVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWYLDEKISGLHSRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            +S+KL++AVA          DVKQA+  A+LD EV +KLP GCGD S +I +  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T   GE +W+    I                  R+    +++    +Y  +            E   +EA     G ++W+S  +RPD++ AV+AV R AH P  RH
Sbjct:  629 ASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIE-----------------RDVEAGTLRISQTAYIDS---------MGEEWPAREAI----GSMVWVSTFSRPDVSFAVRAVARHAHAPAKRH 835          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.480e-28
Identity = 89/245 (36.33%), Postives = 130/245 (53.06%), Query Frame = 0
Query:    5 SSVKLVIAVAQ--------LDVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWY------LDEKISGLH-SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            +S+KL++AVA          DVKQA+  A+LD EV +KLP GCGD S  I +  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T    E +W+       D +   L  S+ A+ +++   R    S + I       ++ G        D   G +    A+G   ++W+S  +RPD++ AV+AV R AH P  RH
Sbjct:  383 ASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVK-RFDVQSTSRIP------ASPGVDLGPKRDDEKGGEWPVREAIG--SIMWVSTFSRPDVSFAVRAVARHAHAPAKRH 617          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.990e-28
Identity = 79/224 (35.27%), Postives = 121/224 (54.02%), Query Frame = 0
Query:   17 DVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMWSKRLVEV---PGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWY------LDEKISGLH-SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            D+KQA+   +LD EV ++LP GCG  S +IV+  +A  GLKQ+GR W   + +     G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T   GE +W+       D +   L  S+ A+ +++ + R    S + I       +T G        D   G +    A+G   ++W+S  +RPD++ AV+AV R+AH P  RH
Sbjct:  882 DMKQAYTHTTLDEEVFLRLPAGCGYKSHKIVKAERAIYGLKQSGRQWGYHVADTLVENGFEQCKADPCVFRKMVDEVVVMIIMIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVA-RFDVQSTSRIP------ATPGADLGPEREDEEGGEWPVREAIG--SMMWVSTFSRPDVSFAVRAVARRAHAPAKRH 1096          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5JJ03_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ03_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 7.160e-28
Identity = 82/225 (36.44%), Postives = 118/225 (52.44%), Query Frame = 0
Query:   17 DVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWYLDEKI-----SGLH--SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            DVKQA+  A+LD EV ++LP GCGD S +IV+  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI  ++VDD +V+G    C+  LA L   F TT  GE +W+    I     +G +  S+ A+ +++      +++       GV              D   G +    A+G   ++W+S  +RPD++ AV+AV R AH P  RH
Sbjct:  458 DVKQAYTHATLDEEVFLRLPAGCGDKSHKIVKTERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMITVIYVDDNLVAGSDEGCEEFLACLNKKFPTTNLGECEWFDGYAIERDVEAGTYRISQTAYIDSMVKCFDVQSTSRIPASPGVDLGPKRD-------DEKGGEWPVREAIG--SMMWVSTFSRPDVSFAVRAVARHAHAPAKRH 672          
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Match: A0A6H5KL99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL99_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.020e-27
Identity = 80/225 (35.56%), Postives = 116/225 (51.56%), Query Frame = 0
Query:   17 DVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLSKATCGLKQAGRMW----SKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVDDVIVSGKSVECDSLLAALRTGFQTTR-GELKWY------LDEKISGLH-SRPAFCENLFSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGELIWLSGMTRPDIASAVQAVERQAHNPTDRH 229
            DVKQA+  A+LD EV +KLP GCGD S +I +  +A  GLKQ+GR W    +  LVE  G  Q K+DPCVFR     V  MI+ ++VDD++V+G   +C+ LLA+L   F T   GE  W        D +   L  S+ A+ +++  P   +++       GV              D  +G  +       G + W+S  +RPD++ AV+A+ R AH    RH
Sbjct:  831 DVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECHWCDGCAIERDVEAGTLKISQTAYIDSMVKPFDVQSTSRIPASPGVDLGPKR--------DDEKG-GEWPVREAKGSMTWVSTFSRPDVSFAVRAIARHAHATAKRH 1045          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40631.10499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE3.020e-3037.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.120e-3037.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE3.140e-3037.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE3.150e-3037.14Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JQN6_9PHAE6.990e-3037.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTV6_9PHAE1.850e-2935.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE1.480e-2836.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1N9_9PHAE2.990e-2835.27Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JJ03_9PHAE7.160e-2836.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KL99_9PHAE1.020e-2735.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..110
e-value: 1.4E-14
score: 54.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40631contigH-paniculata_contig40631:742..1658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40631.10499.1mRNA_H-paniculata_contig40631.10499.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40631 323..1855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40631.10499.1 ID=prot_H-paniculata_contig40631.10499.1|Name=mRNA_H-paniculata_contig40631.10499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MVAASSVKLVIAVAQLDVKQAFIQASLDFEVSMKLPEGCGDTSGRIVRLS
KATCGLKQAGRMWSKRLVEVPGMAQSKSDPCVFRLEKRGVADMILCVHVD
DVIVSGKSVECDSLLAALRTGFQTTRGELKWYLDEKISGLHSRPAFCENL
FSPRLRETSGNSIKHHGVSYSTAGYPFVLLLCDSPEGIFQEACALGCGEL
IWLSGMTRPDIASAVQAVERQAHNPTDRH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2