prot_H-paniculata_contig402.10413.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig402.10413.1
Unique Nameprot_H-paniculata_contig402.10413.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length425
Homology
[Close]
BLAST of mRNA_H-paniculata_contig402.10413.1 vs. uniprot
Match: D8LBT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT1_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 8.560e-56
Identity = 114/217 (52.53%), Postives = 151/217 (69.59%), Query Frame = 0 
Query:   48 MRHYLASWHSMSQASAAIAEGLAKLAEVGGGP-------------QEASPMQDMARMYGLAHRSIDGVVREPAHRVAEDMVLRQIGALLSRFPPIYKKIIRRRQLLADFTLAESKLRTAEAVQQKDRNRDPGMS-TEQTRRLATSMETAASVANGVTQEVIADIDRFQDERGTMLVPQVSALVGCQAYFFRRSAAVMERLTTSLPFSSLALCRLVQP 250
            M+ YL SW +M +ASAAIA+GLAKLA+   G              Q  SP+ DMAR+Y  AHR+ID  VREP  RV ED  LR+ GALLSRFPPI+ K+ RR+Q+LAD   A+S++R AEA ++K+R+    ++  E  RR++ ++ TA +VA GVT EV+AD +R + ER  MLVPQVSALVG QA+F RRSA V+E+L + LP S+LALC+L+ P
Sbjct:    1 MQVYLTSWQAMCRASAAIAKGLAKLAKGSDGAVGARGDNDGVKDKQGVSPLVDMARLYDSAHRAIDRGVREPTQRVVEDTTLRETGALLSRFPPIFAKVTRRKQVLADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVAEGVTAEVVADAERLEREREAMLVPQVSALVGGQAFFMRRSAVVLEKLASQLPHSALALCQLLGP 217
[Close]
BLAST of mRNA_H-paniculata_contig402.10413.1 vs. uniprot
Match: A0A6H5KWM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM0_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 4.570e-22
Identity = 58/112 (51.79%), Postives = 82/112 (73.21%), Query Frame = 0 
Query:  140 LADFTLAESKLRTAEAVQQKDRNRDPGMS-TEQTRRLATSMETAASVANGVTQEVIADIDRFQDERGTMLVPQVSALVGCQAYFFRRSAAVMERLTTSLPFSSLALCRLVQP 250
            +AD   A+S++R AEA ++K+R+    ++  E  RR++ ++ TA +VA+GVT EV+AD +R + ER  MLVPQVSALVG QA+F RRSA V+E+L   LP S+LALCRL+ P
Sbjct:    1 MADVEAAKSRVRAAEAAREKERDSFAVVAGKEHRRRMSDALATAVAVADGVTAEVVADAERLERERAAMLVPQVSALVGGQAFFMRRSATVLEKLAAQLPHSALALCRLLGP 112
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig402.10413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBT1_ECTSI8.560e-5652.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWM0_9PHAE4.570e-2251.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..54
NoneNo IPR availablePANTHERPTHR47174FAMILY NOT NAMEDcoord: 19..238
NoneNo IPR availablePANTHERPTHR47174:SF3BRIDGING INTEGRATOR 3coord: 19..238
IPR004148BAR domainPFAMPF03114BARcoord: 18..236
e-value: 9.4E-14
score: 51.6
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 17..238
e-value: 1.3E-23
score: 85.8
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 18..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig402contigH-paniculata_contig402:29892..35617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig402.10413.1mRNA_H-paniculata_contig402.10413.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig402 29795..36743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig402.10413.1 ID=prot_H-paniculata_contig402.10413.1|Name=mRNA_H-paniculata_contig402.10413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=425bp
MGFGRKTKGLLSWVSQPKTEKENDPVFAKITQDLDELRKTLNGLQDSMRH
YLASWHSMSQASAAIAEGLAKLAEVGGGPQEASPMQDMARMYGLAHRSID
GVVREPAHRVAEDMVLRQIGALLSRFPPIYKKIIRRRQLLADFTLAESKL
RTAEAVQQKDRNRDPGMSTEQTRRLATSMETAASVANGVTQEVIADIDRF
QDERGTMLVPQVSALVGCQAYFFRRSAAVMERLTTSLPFSSLALCRLVQP
PSAAVITDVSDADDRFSSPLLDFPTASSSLIHASFSHSSPSTSNFSENPV
ADGGVPMPSSLDSSAAGGLLGSSSASYLGSPTFDRLSMPAGMSAPVRPVG
LVSGGLDGVSGERDISRRPLPHPPMRPPAPAPPPLPRPPVESAPPADLTG
GAAAGWGAADVEDEEDEVVEEVLW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004148BAR_dom
IPR027267AH/BAR_dom_sf