mRNA_H-paniculata_contig4011.10403.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: D7FN92_ECTSI (Nucleotidyltransferase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN92_ECTSI) HSP 1 Score: 706 bits (1821), Expect = 2.960e-238 Identity = 416/674 (61.72%), Postives = 472/674 (70.03%), Query Frame = 1
Query: 1 INRYRQFLSLHQAVGENVRAEDMPHLPGKRILGSSVHPSFAEARGLALQVYLRQLVCVGAAWRVPQLTGFLDTRASMMGVQGQISEVLDQVDRMESLCVDLQQQLGISQLQIQSQNDLVETLCRRIQQLEPSTGPTLTIPGAEPYFEAAPGLVRRMS-----TFGGSGIGSGGLGGASVPASSIDMSDLNNLVKRVESANQLARKTASDDEDDAVDQLLEHQHQIM-RSASAYSLASNPDAGGQQRLDRLALDRKDSLTMMTDFYVGSLDAAPIAQSIHDGDGQEEDTGAIAQGATVGGVVMTG---TAPITIPAPQGS--AKVWERLQKGGSLLGEPEERMMAEGQDGNTPGSGIVKDVSRSMFGLASPTCPPN-----APRWPASGLSTLGAIFGKNNNTTSDSNHSHGKRGSTPRGGAGGAGVGLGEILRDGGGGPSEAEEDPLPLDLVPGNRQSLAIDRRVDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLN-------PEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIKVMYV 1953
+ RYRQFLSLH AV E+++ ED+PHLPGKR+LGSSV PSFAEARGLALQVYLRQLVCV AAWRVPQLTGFLD RASMMGVQ QI EVLDQ+DRM SLCVDLQ QL +SQ+Q+Q QN+LVE LCRR+QQ++ A F + PG++RRMS T G +G + G GG VP+++IDMSDLNNLVKRVESANQLA K SDDEDDAVD+LLEHQHQ+M RS+S+YSLASNPDAG Q+ LDRK+S FY+GS+DA Q +GD QE +A G G G PITIP P+GS +KVWERL+KGGSLLG+PEERMMAEGQDGNTPGSG VKD+SRSMFGL+SP P APRWP+S + G G S+ EE LPLD++P N+Q LAIDRRVDDLL+LLRPA RA GYR+SVFRFVTRQVKRALGAQCFPVGGYAIQ YLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEAS +K+ P+ + G G KEEGSSY+HRLSNVNFINMG +QKIKCVVDNQVAVDIGANQVGD++TVALLEETDQLLGK+HLFKRSLLLIK +V
Sbjct: 170 LRRYRQFLSLHTAVSEHLKPEDVPHLPGKRLLGSSVDPSFAEARGLALQVYLRQLVCVSAAWRVPQLTGFLDERASMMGVQTQIGEVLDQMDRMSSLCVDLQHQLSLSQMQVQGQNELVENLCRRLQQVDGGADQA-----AAYSFGSGPGIMRRMSSMSFTTGGMAGSAAAGFGGTPVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAGMQR------LDRKESNDF---FYMGSIDAGGSTQLPGEGDTQESSPD-VANGEDAAGDSRRGRNAAVPITIPVPEGSMPSKVWERLRKGGSLLGDPEERMMAEGQDGNTPGSGTVKDISRSMFGLSSPPQPXXXXXXXAPRWPSSLAAIFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSDVEEIALPLDILPSNKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQVKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASEEAAEEEGSGTSVGGCPEKITAVGEGATPKQEGGDGGGAAIR--------KEEGSSYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIKSWWV 820
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A6H5KVP2_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP2_9PHAE) HSP 1 Score: 665 bits (1715), Expect = 1.290e-216 Identity = 418/742 (56.33%), Postives = 479/742 (64.56%), Query Frame = 1
Query: 1 INRYRQFLSLHQAVGENVRAEDMPHLPGKRILGSSVHPSFAEARGLALQVYLRQLVCVGAAWRVPQLTGFLDTRASMMGVQGQISEVLDQVDRMESLCVDLQQQLGISQLQIQSQNDLVETLCRRIQQLEP-----------------------------------------------------------------STGPTL-----TIPGAEPY----FEAAPGLVRRMS-----TFGGSGIGSGGLGGASVPASSIDMSDLNNLVKRVESANQLARKTASDDEDDAVDQLLEHQHQIM-RSASAYSLASNPDAGGQQRLDRLALDRKDSLTMMTDFYVGSLDAAPIAQSIHDGDGQEEDT----GAIAQGATVGGVVMTGTAPITIPAPQGS--AKVWERLQKGGSLLGEPEERMMAEGQDGNTPGSGIVKDVSRSMFGLASPT-----CPPNAPRWPASGLSTLGAIFGKNNNTTSDSNHSHGKRGSTPRGGAGGAGVGLGEILRDGGGGPSEAEEDPLPLDLVPGNRQSLAIDRRVDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLNPEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIKVMYV 1953
+ RYRQFLSLH AV E+++ EDMPHLPGKR+LGSSV PSFAEARGLALQVYLRQLVCV AAWRVPQLTGFLD RASMMGVQ QI EVLDQ+DRM SLCVDLQ QL +SQ+Q+Q QN+L+E LCRR+QQ+E STGPT+ GA+ + PG++RRMS T G +G + G GG SVP+++IDMSDLNNLVKRVESANQLA K SDDEDDAVD+LLEHQHQ+M RS+S+YSLASNPDAG Q+ LDRK+S FY+GS+DA Q + D QE G +A G + G PITIP P+GS +KVWERLQKGGSL+G+PEERMMAEGQDGNTPGSG ++SRSMFGL+SP PPNAPRWP+S + G S+ EE LP+D++P N+Q LAIDRRVDDLL+LLRPA RA GYR+SVFRFVTRQVKRALGAQCFPVGGYAIQ YLPDEEVGISAFLCHGQEKSWFVR+NETLCKVSSEAS +K+ + GA XXXA KE+G Y+HRLSNVNFINMG +QKIKCVVDNQVAVDIGANQVGD++TVALLEETDQLLGK+HLFKRSLLLIK +V
Sbjct: 168 LRRYRQFLSLHTAVSEHLKTEDMPHLPGKRLLGSSVDPSFAEARGLALQVYLRQLVCVSAAWRVPQLTGFLDERASMMGVQTQIGEVLDQMDRMSSLCVDLQHQLSLSQMQVQGQNELIENLCRRLQQVEQDNAALSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTGPTMYGGSYNSGGADQTAAYSLGSGPGIMRRMSSISFTTGGMAGSAAAGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAGMQR------LDRKESNDF---FYMGSIDAGGSTQLPGEEDTQESSPDVAIGEVADGDSRRG--RNAAVPITIPVPEGSMPSKVWERLQKGGSLMGDPEERMMAEGQDGNTPGSGT--EISRSMFGLSSPXXXXXGAPPNAPRWPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXMVPAXXXXXXGLSDIEEIALPMDILPSNKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQVKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRLNETLCKVSSEASEETDAEEGPGTSVGGCPEKITAVGE--GATPKQEGGXXXAAVRKEDG--YRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIKSWWV 890
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A7S2RYN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYN3_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.340e-20 Identity = 45/91 (49.45%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1285 DPLPLDLVPGNRQSLAIDRRVDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEKSWFVR 1557
D LP+D++P +R + D +V +LL+L+ P+ + R+ VFR +++QVKR LGA C VG +A +TYLPD+E+ ++AFLC GQEKSWF+R
Sbjct: 72 DFLPMDVIPSHRSATPADTKVGELLRLIAPSDVSNRARQRVFRLISQQVKRTLGAACISVGSFAERTYLPDQEIILAAFLCRGQEKSWFIR 162
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A6A7G9I3_9CRUS (Uncharacterized protein n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G9I3_9CRUS) HSP 1 Score: 93.6 bits (231), Expect = 6.140e-16 Identity = 61/199 (30.65%), Postives = 99/199 (49.75%), Query Frame = 1
Query: 1345 VDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLNPEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIK 1941
V +++ L P+ + R +FRFV+ V++A+G+Q +P G +A++TYLPD ++ +SAF H + SW RV E L K ++ + ++P R+ N+ F+N + +K + ++ VDI AN+ +ST+A EE DQL+GKNHLFKR++LL K
Sbjct: 797 VSMVIRHLLPSEHSESVRFGIFRFVSEIVRKAVGSQVYPHGSFALKTYLPDGDIDLSAFFSHSRTASWAERVTEELMKEINKPT-------------------IDP----------------------------LFRVQNIIFVNADP-KLVKSQI-GRITVDISANRTEALSTIAFFEEIDQLIGKNHLFKRTILLSK 946
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A0D9VR37_9ORYZ (Uncharacterized protein n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VR37_9ORYZ) HSP 1 Score: 85.9 bits (211), Expect = 1.480e-13 Identity = 62/214 (28.97%), Postives = 102/214 (47.66%), Query Frame = 1
Query: 1303 LVPGNRQSLAIDRRVDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEK-SWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLNPEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIK 1941
L+ G R + A ++R +L+ ++P + G R++V+ +V R + L Q F G ++TYLPD ++ ++AF + K +W V + L E +E+ + + R+ V +I+ ++ IKC+VDN + VDI NQVG + T+ LEE D L+G+NHLFKRS++LIK
Sbjct: 17 LLDGERWAAA-EKRTSELIARIQPNEDSEGRRRAVYDYVRRLIMNCLSCQVFTFGSVPLKTYLPDGDIDVTAFSDSEELKDTWADLVRDAL-------------------------------------------------EHEEKSENAEFRVKEVQYIH-AEVKIIKCLVDN-IVVDISFNQVGGLCTLCFLEEVDALIGQNHLFKRSIILIK 178
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A7N2R4X3_QUELO (Uncharacterized protein n=2 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2R4X3_QUELO) HSP 1 Score: 79.3 bits (194), Expect = 7.510e-13 Identity = 47/182 (25.82%), Postives = 85/182 (46.70%), Query Frame = 1
Query: 1396 RKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLNPEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIK 1941
RK V ++V R +++ + + FP G ++TYLPD ++ ++ C E +W V+ L ++E + + + N++ I+ ++++KC+V N + VDI NQ+G + T+ LE+ D+L+GK+HLFKRS++LIK
Sbjct: 15 RKEVIKYVQRLIRKRVRCEVFPYGSVPLKTYLPDGDIDLTTLSCPSVEDAWVSDVHAVL-------------------------------------------------REEEHNEASRFEVKNIHCID-AEVKRVKCIVQN-IVVDISFNQLGGLCTLCFLEQVDRLVGKDHLFKRSIILIK 145
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A6P5GK10_ANACO (uncharacterized protein LOC109724067 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GK10_ANACO) HSP 1 Score: 80.9 bits (198), Expect = 8.190e-13 Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = 1
Query: 1318 RQSL-AIDRRVDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLNPEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIK 1941
R SL A +RR D++ +RP + RKSV +V + + +LG++ FP G ++TYLPD ++ ++AF G +++ C + E E+ S + + +V +IN ++ +KC++DN + VDI NQ+G + T+ LE D+ +GK+HLFKRS++LIK
Sbjct: 40 RDSLRAAERRAADIVARVRPTDDSESKRKSVVAYVQKLIGVSLGSEVFPFGSVPLKTYLPDGDIDLTAF---GSAAPDSTLISDVRCILEYE----------------------------------------------EQNSDAEFEVKDVQYIN-AEVRLVKCLIDN-IIVDISFNQMGGLCTLCFLELVDRHIGKDHLFKRSIILIK 197
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A6V7PQJ9_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PQJ9_ANACO) HSP 1 Score: 81.3 bits (199), Expect = 3.180e-12 Identity = 70/247 (28.34%), Postives = 111/247 (44.94%), Query Frame = 1
Query: 1204 RGGAGGAGVGLGEILRDGGGGPSEAEEDPLPLDLVPGNRQSL-AIDRRVDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLNPEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIK 1941
RGGAG G D GGG P + R SL A +RR D++ +RP + RKSV +V + + +LG++ FP G ++TYLPD ++ ++AF G +++ C + E E+ S + + +V +IN ++ +KC++DN + VDI NQ+G + T+ LE D+ +GK+HLFKRS++LIK
Sbjct: 20 RGGAGLPGA-------DAGGGDGAVALPPRRI-----RRDSLRAAERRAADIVARVRPTDDSESKRKSVVAYVQKLIGVSLGSEVFPFGSVPLKTYLPDGDIDLTAF---GSAAPDSTLISDVRCILEYE----------------------------------------------EQNSDAEFEVKDVQYIN-AEVRLVKCLIDN-IIVDISFNQMGGLCTLCFLELVDRHIGKDHLFKRSIILIK 203
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A199VTE1_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199VTE1_ANACO) HSP 1 Score: 80.9 bits (198), Expect = 3.500e-12 Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = 1
Query: 1318 RQSL-AIDRRVDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLNPEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIK 1941
R SL A +RR D++ +RP + RKSV +V + + +LG++ FP G ++TYLPD ++ ++AF G +++ C + E E+ S + + +V +IN ++ +KC++DN + VDI NQ+G + T+ LE D+ +GK+HLFKRS++LIK
Sbjct: 40 RDSLRAAERRAADIVARVRPTDDSESKRKSVVAYVQKLIGVSLGSEVFPFGSVPLKTYLPDGDIDLTAF---GSAAPDSTLISDVRCILEYE----------------------------------------------EQNSDAEFEVKDVQYIN-AEVRLVKCLIDN-IIVDISFNQMGGLCTLCFLELVDRHIGKDHLFKRSIILIK 197
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Match: A0A6P6B0D5_DURZI (uncharacterized protein LOC111313938 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6B0D5_DURZI) HSP 1 Score: 80.9 bits (198), Expect = 5.290e-12 Identity = 62/228 (27.19%), Postives = 100/228 (43.86%), Query Frame = 1
Query: 1291 LPLDLVPGNRQSLA----------IDRRVDDLLKLLRPARRAMGYRKSVFRFVTRQVKRALGAQCFPVGGYAIQTYLPDEEVGISAFLCHGQEK-SWFVRVNETLCKVSSEASXXXXXXXXXXXXXXXXGDKLNPEDQVGGAGXXXXXXXXXADEDKEEGSSYKHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDMSTVALLEETDQLLGKNHLFKRSLLLIK 1941
LP L+P S+ + R DL+ ++P + G R +V +V R + + Q F G ++TYLPD ++ ++AF K SW +V + L E++EE + + R+ V +I ++ IKC+V+N + VDI NQ+G + T+ LEE D+L+ +NHLFKRS++LIK
Sbjct: 17 LPNGLLPNEASSVVQIIDSERWMKAEERTADLIACIQPDAPSEGLRNAVADYVQRLISKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKKQNLKDSWAYQVRDML-------------------------------------------------ENEEENENAEFRVKEVQYI-QAEVKIIKCLVEN-IVVDISFNQLGGLCTLCFLEEVDRLINQNHLFKRSIILIK 193 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4011.10403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4011.10403.1 >prot_H-paniculata_contig4011.10403.1 ID=prot_H-paniculata_contig4011.10403.1|Name=mRNA_H-paniculata_contig4011.10403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=652bp INRYRQFLSLHQAVGENVRAEDMPHLPGKRILGSSVHPSFAEARGLALQVback to top mRNA from alignment at H-paniculata_contig4011:436..15622+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4011.10403.1 ID=mRNA_H-paniculata_contig4011.10403.1|Name=mRNA_H-paniculata_contig4011.10403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15187bp|location=Sequence derived from alignment at H-paniculata_contig4011:436..15622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4011:436..15622+ >mRNA_H-paniculata_contig4011.10403.1 ID=mRNA_H-paniculata_contig4011.10403.1|Name=mRNA_H-paniculata_contig4011.10403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3912bp|location=Sequence derived from alignment at H-paniculata_contig4011:436..15622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |