mRNA_H-paniculata_contig3989.10337.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig3989.10337.1
Unique Name	mRNA_H-paniculata_contig3989.10337.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A6H5KIY4_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY4_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 3.350e-53
Identity = 90/146 (61.64%), Postives = 105/146 (71.92%), Query Frame = 1

Query:  235 GLAEAVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIEVAAAKE 672
            G  E   ED + C+MC+RG  D     EG I+GPF     RG+ PR +WVH  CA YSPEV ++ DG   NV KA RRGA L C AC +KGATVGCFNGRCR VYHVPCARSH GWDFE++DRGK FYC++HQEG+S  E+AAAKE
Sbjct: 3006 GATEDPKEDGTFCHMCRRGKSDPFVAKEGRIIGPFRGVVVRGQ-PRQLWVHRKCAEYSPEV-EEVDGELENVAKAIRRGASLKCFACGKKGATVGCFNGRCRTVYHVPCARSHAGWDFEKADRGKEFYCLMHQEGKSEAEIAAAKE 3149

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: D8LQQ1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ1_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.100e-52
Identity = 89/143 (62.24%), Postives = 104/143 (72.73%), Query Frame = 1

Query:  244 EAVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIEVAAAKE 672
            E   ED + C+MC+RG  D     EG I+GPF     RG+ PR +WVH  CA YSPEV ++ DG   NV KA RRGA L C AC +KGATVGCFNGRCR VYHVPCARSH GWDFE++DRGK FYC++HQEG+S  E+AAAKE
Sbjct: 1708 EEPKEDGTFCHMCRRGKSDPFVAKEGRIIGPFRGVIVRGQ-PRQLWVHRKCAEYSPEV-EEVDGELENVAKAIRRGASLKCFACGKKGATVGCFNGRCRTVYHVPCARSHAGWDFEKADRGKEFYCLMHQEGKSEAEIAAAKE 1848

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A7S2XYR1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYR1_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.840e-24
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 1

Query:  376 IWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQ 633
            +WVH+NCA++SPEV    DG+W NV  + RR   L C+ CD  GA++GC +  CR  YH+ CA    GWDF+RSD+GK F C  H+
Sbjct:   19 VWVHQNCAAFSPEVMFCGDGLWFNVCASVRRAKALACTYCDGGGASIGCRSKICRQSYHLSCAALGTGWDFQRSDQGKLFLCREHR 104

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A7R9U1T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1T6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 9.010e-20
Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = 1

Query:  247 AVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVS-KDEDGVWSNVVKAARRGARLMCS--ACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEG 639
            +V +++S C +C    +D ++       GPFL    RG +   +WVH NCA++SPEV     D    NV+ A +RG ++ C+   C RKGAT+GCF  +C+  YH+ CA +  GW F    R   F+C  H+EG
Sbjct:   30 SVTDEIS-CELCGGKENDLDS-----CEGPFLMPPFRGPNNEMVWVHANCATWSPEVYLSTRDQALCNVLSAVKRGKKVKCALEGCGRKGATIGCFVRKCKRSYHLRCALA-TGWCFRGQAR---FWCEEHREG 153

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: M4B1M4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1M4_HYAAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.140e-16
Identity = 50/129 (38.76%), Postives = 69/129 (53.49%), Query Frame = 1

Query:  271 CNMCKRGPDDQEAYVEGDIVGPF-LDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIE 654
            C  C  G DD    + GD +G + L Y       + ++VH+ CA  SP +  + DG W NVVK  RRG  L+C AC+++GAT+GC    CR+ YH  CA S  GW  ++      F+C  HQ  R+  E
Sbjct: 1294 CAFCGVGDDDAMLKLPGDGMGVYPLMY-----GAQRVFVHDQCAIASP-LCFNRDGNWYNVVKEIRRGRSLVCVACNKRGATIGCTIAACRNSYHWKCAISF-GWSVDQMQ----FFCPAHQPRRTEQE 1411

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A0L0FHE8_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FHE8_9EUKA)

HSP 1 Score: 89.7 bits (221), Expect = 1.760e-16
Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1

Query:  175 GEEEXXXXXXVVGMGLDSSLGLAEAVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIEVAAAKEADARKRAAV 699
            GEEE      ++ +G  +     +      +VC++C RG +  +    G++ GP   YQ   KS  +IWVHENCA ++PE   +E+ V   +    +RG++  C+ C   GAT+GC    C+  +H PC ++  G    RS+    F C+ H+E  + +      ++D  K   V
Sbjct:  660 GEEEDSEEEPILAIGSST-----KDEKRSKTVCSLCARGDNVDDL---GELDGP---YQNARKSMDDIWVHENCAEFTPEFYVNEENVPCGLPSIVKRGSKTKCNHCKLFGATIGCQLKSCKKSFHYPCIQAAGGVRQRRSEEFPVF-CITHKEYINKVPSEKVDKSDKPKAKPV 822

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A0P1A932_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A932_PLAHL)

HSP 1 Score: 87.8 bits (216), Expect = 9.320e-16
Identity = 49/142 (34.51%), Postives = 75/142 (52.82%), Query Frame = 1

Query:  241 AEAVAEDVSVCNMCKRGPDDQEAYVEGDIVG--PFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRSAIEVA 660
            AE   E +  C +C  G DD    + GD +G  P +         + ++VH+ CA  SP +  + DG W NV +  RRG  L+C AC+++GAT+GC    C++ YH  CA ++ GW  ++     HF+C  H+  R+   VA
Sbjct: 1275 AENSDEALLPCALCGIGDDDAMLKLPGDGMGIHPLI------VGVQRVFVHDQCAIASP-LCFNRDGNWYNVTREIRRGRALLCVACNKRGATIGCTISACQNSYHWKCAINY-GWSVDQL----HFFCPDHRTERNVENVA 1404

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A4D9DDC7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDC7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.310e-15
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 1

Query:  268 VCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSK-DEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQ 633
            +C +C +G  + +      + GP L         R +WVH++CA +SP+     EDG W N++   RRG +  C  C++ GAT+GC+   C   YH PCA +  GW F       +F+C  H+
Sbjct: 1383 LCALCGKGHSEAQP-----LPGPVLGSHPLKIRDRPVWVHDDCAHWSPQTFVGQEDGRWYNILVEVRRGRKTKCKGCNKLGATIGCYVRTCSRSYHYPCAVA-TGWTFSPE---VYFHCEKHR 1496

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A2U1J5C0_SMIAN (PHD-type domain-containing protein n=1 Tax=Smittium angustum TaxID=133377 RepID=A0A2U1J5C0_SMIAN)

HSP 1 Score: 84.3 bits (207), Expect = 1.390e-14
Identity = 47/140 (33.57%), Postives = 67/140 (47.86%), Query Frame = 1

Query:  223 DSSLGLAEAVAEDVSVCNMCKRGPDDQEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDE----DGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVH 630
            D  LGL  +    +   +  KR  DD E  V+    G        G+  R  WVH++CA +SP V  +E    D VW NV K   RG  + C +C  +GAT+GCF+ +C+  +HV C+    G    +   G  +YC  H
Sbjct: 1114 DDMLGLFASEYPFIVSLSKTKRAGDDTEKDVQDSKKGD-------GEYKR-FWVHDSCARFSPRVLVEERCGQDAVWYNVGKEVSRGRNIKCGSCGMRGATIGCFDSKCKKSFHVRCS----GMPLSKFQLGYVYYCPKH 1241

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BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Match: A0A484DRG0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRG0_BRELC)

HSP 1 Score: 84.0 bits (206), Expect = 1.880e-14
Identity = 52/143 (36.36%), Postives = 72/143 (50.35%), Query Frame = 1

Query:  232 LGLAEAVAEDVS----VCNMCKRGPDDQEAYVEGDIVGPF-LDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNVVKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSDRGKHFYCVVHQEGRS 645
            LG+A   AE+       C  C  G DD    + G+ +G   L Y       + ++VH++CA  SP +  + DG W NV +  RRG  L+C AC R+GAT+GC    C   YH  CA +  GW  ++     HFYC  HQ  R+
Sbjct: 1266 LGVAPTPAENTDNALIPCAFCGVGNDDAMLKLPGNGMGVHPLIY-----GAQRVFVHDHCAIASP-LCFNRDGKWYNVTREIRRGRSLVCVACSRRGATIGCTVSACPASYHWKCAIN-LGWSVDQL----HFYCPDHQGRRT 1397

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3989.10337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KIY4_9PHAE	3.350e-53	61.64	PHD-type domain-containing protein n=1 Tax=Ectocar...	[more]
D8LQQ1_ECTSI	1.100e-52	62.24	PHD-type domain-containing protein n=1 Tax=Ectocar...	[more]
A0A7S2XYR1_9STRA	1.840e-24	50.00	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7R9U1T6_9STRA	9.010e-20	38.06	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
M4B1M4_HYAAE	1.140e-16	38.76	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]
A0A0L0FHE8_9EUKA	1.760e-16	29.71	Uncharacterized protein n=1 Tax=Sphaeroforma arcti...	[more]
A0A0P1A932_PLAHL	9.320e-16	34.51	Uncharacterized protein n=1 Tax=Plasmopara halsted...	[more]
A0A4D9DDC7_9STRA	2.310e-15	33.33	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A2U1J5C0_SMIAN	1.390e-14	33.57	PHD-type domain-containing protein n=1 Tax=Smittiu...	[more]
A0A484DRG0_BRELC	1.880e-14	36.36	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3989	contig	H-paniculata_contig3989:11952..15522 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	191.4
Seed ortholog evalue	5.5e-46
Seed eggNOG ortholog	2880.D8LQQ1
KEGG ko	ko:K11450
KEGG Pathway	ko04714,map04714
Hectar predicted targeting category	other localisation
GOs	GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006325,GO:0006464,GO:0006476,GO:0006479,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0008213,GO:0009987,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0016575,GO:0018022,GO:0018193,GO:0018205,GO:0019538,GO:0022622,GO:0032259,GO:0032501,GO:0032502,GO:0034968,GO:0035601,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048364,GO:0048731,GO:0048856,GO:0051276,GO:0051568,GO:0071704,GO:0071840,GO:0098732,GO:0099402,GO:1901564
EggNOG free text desc.	SET domain
EggNOG OGs	COG1231@1,COG2940@1,KOG0029@2759,KOG1084@2759
COG Functional cat.	K
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03036
Exons	4
Model size	831
Cds size	831
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3989.10337.1	prot_H-paniculata_contig3989.10337.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig3989 11952..15522 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930220.2275245-CDS-H-paniculata_contig3989:11951..12138	1622930220.2275245-CDS-H-paniculata_contig3989:11951..12138	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3989 11952..12138 -
1691481196.7491128-CDS-H-paniculata_contig3989:11951..12138	1691481196.7491128-CDS-H-paniculata_contig3989:11951..12138	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3989 11952..12138 -
1622930220.245566-CDS-H-paniculata_contig3989:13225..13299	1622930220.245566-CDS-H-paniculata_contig3989:13225..13299	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3989 13226..13299 -
1691481196.7646759-CDS-H-paniculata_contig3989:13225..13299	1691481196.7646759-CDS-H-paniculata_contig3989:13225..13299	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3989 13226..13299 -
1622930220.261611-CDS-H-paniculata_contig3989:14040..14325	1622930220.261611-CDS-H-paniculata_contig3989:14040..14325	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3989 14041..14325 -
1691481196.7782576-CDS-H-paniculata_contig3989:14040..14325	1691481196.7782576-CDS-H-paniculata_contig3989:14040..14325	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3989 14041..14325 -
1622930220.2741477-CDS-H-paniculata_contig3989:15237..15522	1622930220.2741477-CDS-H-paniculata_contig3989:15237..15522	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3989 15238..15522 -
1691481196.7897198-CDS-H-paniculata_contig3989:15237..15522	1691481196.7897198-CDS-H-paniculata_contig3989:15237..15522	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3989 15238..15522 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig3989:11952..15522-
coding sequence from alignment at H-paniculata_contig3989:11952..15522-

protein sequence of mRNA_H-paniculata_contig3989.10337.1

>prot_H-paniculata_contig3989.10337.1 ID=prot_H-paniculata_contig3989.10337.1|Name=mRNA_H-paniculata_contig3989.10337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
SPPPSTATATATATAAATTTTTAAATNSAASIDVSREGASAGDAGSTAAE
ITPAMAEAGEEEGTGTGTVVGMGLDSSLGLAEAVAEDVSVCNMCKRGPDD
QEAYVEGDIVGPFLDYQTRGKSPRNIWVHENCASYSPEVSKDEDGVWSNV
VKAARRGARLMCSACDRKGATVGCFNGRCRHVYHVPCARSHCGWDFERSD
RGKHFYCVVHQEGRSAIEVAAAKEADARKRAAVVAQAQRTRAHRGRGRGR
GRGRGRGRGGAGRGRGWGRGRGTGAAV

mRNA from alignment at H-paniculata_contig3989:11952..15522-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig3989.10337.1 ID=mRNA_H-paniculata_contig3989.10337.1|Name=mRNA_H-paniculata_contig3989.10337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3571bp|location=Sequence derived from alignment at H-paniculata_contig3989:11952..15522- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTCCTCCTCCTTCTACTGCTACTGCTACTGCTACTGCTACTGCTGCTGC
TACTACTACTACTACAGCAGCAGCTACTAACTCTGCTGCTTCCATAGACG
TTTCTCGAGAGGGAGCGAGTGCTGGGGACGCTGGAAGTACGGCGGCTGAG
ATAACGCCGGCGATGGCGGAGGCCGGGGAGGAGGAAGGGACAGGAACAGG
GACTGTGGTGGGGATGGGGTTGGACTCGAGTTTGGGGTTGGCGGAGGCTG
TTGCTGAGGATGTGTCAGTTTGCAACATGTGTAAGGTGGGTGGGTGGGTG
GGTGCGTAGGTGGGTAAGTGAGTTCATTGGCTTTCAATTTTTTTTAGTTC
CCGTACAAGTTTTCAGGTTCGTCTGTTTGTGTTCTACTCTTATGATGGCA
AGTCATTACTAGAAAAGAATTCAATATTTTATTGGTTGGCTGCTGGATGA
ATGGGTGGGTGGGTGGGTGGGTGACGAAAGGAAGCGAAGCGATGGTTCAT
CTGTATATTGTCAGTCTCAGTGTACCATGGTGTTGTTTTTTTCGTGTGCA
AGGGTAAGCTTGACTAAATCGTGTTGAATGGCTGCTGTCAAGGATTTGCC
GGTTTTGCAATAGATGGTACTCTACGGGAGGTGGGGGCGGGGGGGGCGGG
GGGAAACCAATTGCGTCTCTCTTGTGTGTCTACGATTTGTAACCCAAGTT
GGAGAAAAGAGTGGTGGGTGCAAGCACTCTTGAACCCCAGTACAATATGT
AGCATACATGGCATGCTGGTGTTTTTTAGTTCATAGATCTGATCATTCAT
GCCTACGTATGTTGATGAGCAATTTGCGAATAGTCATCAAACAAATGCCG
CGTTTGTGCTTGTGTTTTACGGCTAATGTATAGCGTAGGACAGTAGGGAG
GATAACCACTTCAATGCCACCGGCGAGCGGTGTTTGGTGTTTGCGTGTTC
GGAAGTCGTCTTGTGGACGGAGAGTTTTGTGGTTCACTGTTAAACTGTAC
CGTGTTTGTAGAGGACAATACCAGTACTTATTTTATAGCTCGCGTGATAC
GCTCGGTTTTCTACGTGCAAGACGTTTTTTTGTCTAAGCTTTTGCCTCTC
TCCGTGTTTACCCCTTCAGGATTATGTTGAAAGTCACACAATCCCCCTCG
CCCCCCTCGCCCTGTACTCGTTTCCAACTCTCCCCTCCCGGCGGCAGAGA
GGACCCGATGACCAGGAAGCATACGTAGAAGGGGACATAGTGGGACCATT
CTTGGATTACCAAACGCGAGGAAAGTCCCCGCGCAATATCTGGGTGCACG
AGAACTGCGCTTCTTACAGCCCAGAAGTGAGCAAGGATGAGGACGGGGTG
TGGTCAAACGTGGTGAAGGCTGCTCGGCGGGGCGCGCGTCTGATGTGCTC
CGCGTGTGATCGGAAGGGTGCTACGGTCGGATGTTTCAACGGTCGATGTC
GGCATGTGTATCACGTGCCGTGTGCTCGGTCGGTGAGAGGTGGTTGTTGC
GATTATGGGTGTTGGTGGTTGGTATGTTTGTTGTTGTTGGTGGTGGTGGC
GGTGGTGCTGTTGTTACTGTCATTGTCGTGGCCGTTGTCGTTGCGGTCGT
TATTTTTTTTTCTATGACTTTGAATCCGAACCGACCAGTCAGTTCTCGTT
GATTGATGGTAGTAGCGCAGACCACCCACCGTTGCTTCCTTTTTGCTGGG
ATAGACAGACCAAGAATAACCAGCACCGATATATTACGTCCACTGTGCGC
ATGAGATGAACGTTTTGCTATTATCAGACATTTTAAAACATCACACACTG
GTTTGTAACTGACAACACTCTTGTACAGCTCCGATCGCCTTACCTCGACA
TACGTTTTTCTTCTCCCCCTTGCCTTCAATCAAACGTCTCGAAATGTTTC
GTCAGAAAATACAAGCACTTGCATGTTCGCTAGATTTTTTTTTTTCAACA
AGAGGTACTGTTTGTTGTCCATGCGCTACGTCGCCTTTTCGAGATTCTTG
AGCTCCGCTGTATGTCGACCGAGCCGCGTACACGCACGTCCGCCACAAAA
ATGCCCCCCTTCTTTTCACGCACTCGTTTGTGCCCTTGGCTAACGCCTGA
AACGCGGTGAAGTGCCCCAATCTGTGTCGTTTCACCTCAGCATTGCCATA
TTAACTTTCTCTGCCTGCCTGTGTACGTTTGTTATCCTCGTCCCGCCACT
CAACGCGGGGTGCTTTGCCACAGCACTGCGGCTGGGACTTCGAGAGGAGC
GACCGCGGGAAGCACTTTTACTGCGTTGTGCACCAAGAGGGCCGCAGGTG
CGAAGTACTGACACCCTGCACTTAATCTATCCATATGTAGGTTTCAAGTT
TTGAGGGGGTAAGGTGAAGGGTGGAGCGGGGCGAGCGGGGACAGGATGGC
GAAGGGAGGGAGCTTAGCTCTTGCCGGCTAGTTGAACCATAGCTCTGACG
TTCGTATAATAACTCCATCTTAGTCATGTTGAAACAAGGCAGCTGATTTC
AAACTTAGTTGTGTGCACTTAACAGCAAAATTAGACGAACACGACGGGAG
CGGGGGAAGTCAAACTCATGTTCTGCATGTCGTAGTTGTAGACCATTGAC
CACGCATGTAGGCAGTCCTCGGGAGGACGGGGCGTTGATCCTATCAGAGC
GATTTCCGATGGTCAATCGCTCTTGGCGGGAGCAAAAGGGGTCATGGACA
AAGGAATTATTACGGTTTGGATCGGGTACAAGTGGAAATAGAGAACGTGC
CAATAACAGTAAGCATTCATTAGAGTTTGAAAGGCATTCTCCGCCATTCC
AATATTGCTAAGTAGCTGAATCCGAAGCCCTGATGACCAATGACCAAAAA
ATAACGGGAGAGGGGAAGGGGGGGGGGTGGTGAAGTCTTCAAGTGCAGTT
TTTCTTCAGACTTTATGTTCGTGTTGTATTCTCCTATTTAATGCAGACTT
TGGAGACGTCAATGATAAGATACAGCATTTTGTATCAACTGGCACAAGTT
CGTAAATGTTGAACCGGTGTTTACTCTACACAGTTAGGACGTACCCCGTA
CGACACGTTCATCGTAAATCCATTTTTTCCCTGTGGGTAAATTATTATCC
ACCGTACCTATTACACACGCCGTGTCATCAACTTGACTAGTTAAGGTCTA
CTGTAAACACAGTACAGTACCCTCCAGAACGCCCCCTCAAATGTTTTTCT
TCAAGCTGCACACGAGAAAAACAGATCTGAATTCCCTTCAACTCAATTTT
CGATAAGTGGTGATGATCACGACCACGACAACGCTTGCCAATACGCACAC
TTTCCAAACCGCACTCGCTACCCCCACCCCATGCGCACGCGCCACACATG
CCCCCACACAACACCACCGTCGCCATGTCTTCAGCGCCATTGAAGTGGCC
GCCGCGAAGGAGGCAGACGCCCGCAAGCGAGCTGCAGTCGTCGCCCAGGC
GCAGCGGACACGAGCACACCGGGGACGGGGCAGGGGACGGGGCAGGGGAC
GCGGTCGAGGTCGTGGGGGGGCAGGAAGGGGCAGAGGGTGGGGTAGAGGC
AGAGGCACGGGCGCCGCCGTC

Coding sequence (CDS) from alignment at H-paniculata_contig3989:11952..15522-

>mRNA_H-paniculata_contig3989.10337.1 ID=mRNA_H-paniculata_contig3989.10337.1|Name=mRNA_H-paniculata_contig3989.10337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig3989:11952..15522- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTCCTCCTCCTTCTACTGCTACTGCTACTGCTACTGCTACTGCTGCTGC
TACTACTACTACTACAGCAGCAGCTACTAACTCTGCTGCTTCCATAGACG
TTTCTCGAGAGGGAGCGAGTGCTGGGGACGCTGGAAGTACGGCGGCTGAG
ATAACGCCGGCGATGGCGGAGGCCGGGGAGGAGGAAGGGACAGGAACAGG
GACTGTGGTGGGGATGGGGTTGGACTCGAGTTTGGGGTTGGCGGAGGCTG
TTGCTGAGGATGTGTCAGTTTGCAACATGTGTAAGTCTCCTCCTCCTTCT
ACTGCTACTGCTACTGCTACTGCTACTGCTGCTGCTACTACTACTACTAC
AGCAGCAGCTACTAACTCTGCTGCTTCCATAGACGTTTCTCGAGAGGGAG
CGAGTGCTGGGGACGCTGGAAGTACGGCGGCTGAGATAACGCCGGCGATG
GCGGAGGCCGGGGAGGAGGAAGGGACAGGAACAGGGACTGTGGTGGGGAT
GGGGTTGGACTCGAGTTTGGGGTTGGCGGAGGCTGTTGCTGAGGATGTGT
CAGTTTGCAACATGTGTAAGAGAGGACCCGATGACCAGGAAGCATACGTA
GAAGGGGACATAGTGGGACCATTCTTGGATTACCAAACGCGAGGAAAGTC
CCCGCGCAATATCTGGGTGCACGAGAACTGCGCTTCTTACAGCCCAGAAG
TGAGCAAGGATGAGGACGGGGTGTGGTCAAACGTGGTGAAGGCTGCTCGG
CGGGGCGCGCGTCTGATGTGCTCCGCGTGTGATCGGAAGGGTGCTACGGT
CGGATGTTTCAACGGTCGATGTCGGCATGTGTATCACGTGCCGTGTGCTC
GGTCGAGAGGACCCGATGACCAGGAAGCATACGTAGAAGGGGACATAGTG
GGACCATTCTTGGATTACCAAACGCGAGGAAAGTCCCCGCGCAATATCTG
GGTGCACGAGAACTGCGCTTCTTACAGCCCAGAAGTGAGCAAGGATGAGG
ACGGGGTGTGGTCAAACGTGGTGAAGGCTGCTCGGCGGGGCGCGCGTCTG
ATGTGCTCCGCGTGTGATCGGAAGGGTGCTACGGTCGGATGTTTCAACGG
TCGATGTCGGCATGTGTATCACGTGCCGTGTGCTCGGTCGCACTGCGGCT
GGGACTTCGAGAGGAGCGACCGCGGGAAGCACTTTTACTGCGTTGTGCAC
CAAGAGGGCCGCAGCACTGCGGCTGGGACTTCGAGAGGAGCGACCGCGGG
AAGCACTTTTACTGCGTTGTGCACCAAGAGGGCCGCAGCGCCATTGAAGT
GGCCGCCGCGAAGGAGGCAGACGCCCGCAAGCGAGCTGCAGTCGTCGCCC
AGGCGCAGCGGACACGAGCACACCGGGGACGGGGCAGGGGACGGGGCAGG
GGACGCGGTCGAGGTCGTGGGGGGGCAGGAAGGGGCAGAGGGTGGGGTAG
AGGCAGAGGCACGGGCGCCGCCGTCCGCCATTGAAGTGGCCGCCGCGAAG
GAGGCAGACGCCCGCAAGCGAGCTGCAGTCGTCGCCCAGGCGCAGCGGAC
ACGAGCACACCGGGGACGGGGCAGGGGACGGGGCAGGGGACGCGGTCGAG
GTCGTGGGGGGGCAGGAAGGGGCAGAGGGTGGGGTAGAGGCAGAGGCACG
GGCGCCGCCGTC