prot_H-paniculata_contig3983.10326.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3983.10326.1
Unique Nameprot_H-paniculata_contig3983.10326.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig3983.10326.1 vs. uniprot
Match: D7FU95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU95_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 9.210e-20
Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 0
Query:    1 STAPTLDLARLIHNAEEGGMSLEELEASLASPIVATPPALLRPGVGPAARGAAG--RGRGPLIGSRVVSGSF-TSRSTSIA----SHNAYTDDDISS 90
            S +P+LD+ARL++NAEEGGM+LEE+EA LASPIVATPPALLRPGVG AARG  G  RGRG L+     SGS+ +SRSTSI     S+N  T+DD+SS
Sbjct:  969 SQSPSLDMARLLYNAEEGGMTLEEVEACLASPIVATPPALLRPGVG-AARGGPGAPRGRG-LLQRNSASGSYISSRSTSITEDMMSNNNLTEDDMSS 1063          
BLAST of mRNA_H-paniculata_contig3983.10326.1 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.680e-15
Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 0
Query:    1 STAPTLDLARLIHNAEEGGMSLEELEASLASPIVATPPALLRPGVG-PAARGAAGRGRGPLIGSRVVSGSF-TSRSTSIA----SHNAYTDDDISS 90
            S +P+LD+AR +H AEEGGM+L+E++A LASPIVATPPALLRPGVG P A  + G     L+     SGS+ +SRSTSI     S+N  T+DD+SS
Sbjct: 1222 SPSPSLDMARFLHTAEEGGMTLDEVDACLASPIVATPPALLRPGVGAPRAPRSGG-----LLQRNSASGSYMSSRSTSITEDVISNNNLTEDDMSS 1312          
BLAST of mRNA_H-paniculata_contig3983.10326.1 vs. uniprot
Match: A0A6H5KLU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU0_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 4.320e-6
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    1 STAPTLDLARLIHNAEEGGMSLEELEASLASPIVATPPALLRPGVGPAARGAAGRGRGPLIGSRVVSG 68
            S AP  D+A L+ NAE GGM+L++LEASL S I+ +PP++LRPG          RG G L G+R  +G
Sbjct:  168 SQAPVPDIADLLDNAEMGGMALDDLEASLTSLIMNSPPSMLRPGT------TVSRGLGLLRGNREGAG 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3983.10326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FU95_ECTSI9.210e-2064.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL50_9PHAE2.680e-1556.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLU0_9PHAE4.320e-648.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3983contigH-paniculata_contig3983:6811..9172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3983.10326.1mRNA_H-paniculata_contig3983.10326.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3983 6810..9172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3983.10326.1 ID=prot_H-paniculata_contig3983.10326.1|Name=mRNA_H-paniculata_contig3983.10326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
STAPTLDLARLIHNAEEGGMSLEELEASLASPIVATPPALLRPGVGPAAR
GAAGRGRGPLIGSRVVSGSFTSRSTSIASHNAYTDDDISS
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