mRNA_H-paniculata_contig398.10318.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: A0A6H5KUV0_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUV0_9PHAE) HSP 1 Score: 276 bits (706), Expect = 5.290e-87 Identity = 161/229 (70.31%), Postives = 183/229 (79.91%), Query Frame = 2
Query: 65 LCVVSILLLG-STADAFAMSIRPSSSAQQQRHPIATSASLQTRGDFVNQIVGAGAXXXXXXXXXXXXXLPSVAASTPTAGSVAPDFTLPSNTGKDINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLASL 748
L +++++L G + AF MS+RPSSS LQ R DF+ Q VG GA XXXXXXXXX GS+APDFTLPSN GKDI+LKDLLK+AKHTVLYFYPGDFTSGCTIEA+GFQ+DFEKYG +AQIVGVSVDS++KHL+FEKSY LQFPLLSD+GANVAD+YGSKLDIPFMGKFANRLTFIIGSDGKIEKVF+DVE KVAKHS +VLATLA+L
Sbjct: 5 LSILAVILAGLPSTGAFTMSVRPSSSG----------VGLQ-RADFLRQ-VGVGAAGIAXXXXXXXXXXXXXXXXV---GSMAPDFTLPSNAGKDISLKDLLKQAKHTVLYFYPGDFTSGCTIEAQGFQRDFEKYGANNAQIVGVSVDSIEKHLNFEKSYNLQFPLLSDIGANVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVESKVAKHSAEVLATLATL 218
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: A0A7S3UYL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYL6_HETAK) HSP 1 Score: 207 bits (526), Expect = 7.870e-60 Identity = 97/147 (65.99%), Postives = 121/147 (82.31%), Query Frame = 2
Query: 299 GSVAPDFTLPSNTGKDINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATL 739
G AP F LPSNTGKDI+L+DL K+T+LYFYPGDFT GCTIEA F++DF+++ + +AQIVGVSVDSVDKHLDF+K YGL+FPLLSD GA V++ YGS L IP +GKF+NR T+II +GK+ KV++DVE KVAKHS++VLA L
Sbjct: 93 GGAAPTFKLPSNTGKDISLEDLTSTGKYTILYFYPGDFTQGCTIEANAFERDFDEFAKLNAQIVGVSVDSVDKHLDFKKKYGLRFPLLSDQGAVVSESYGSSLSIPLLGKFSNRQTYIISPEGKVVKVYTDVESKVAKHSQEVLADL 239
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: A0A835ZEZ0_9STRA (Peroxiredoxin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ0_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.060e-59 Identity = 126/223 (56.50%), Postives = 149/223 (66.82%), Query Frame = 2
Query: 80 ILLLGSTADAFAMSIRPSSSAQQQRHPIATSASLQTRGDFVNQIVGAGAXXXXXXXXXXXXXLPSVAASTPTAGSVAPDFTLPSNTG-KDINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLAS 745
++ + + A AF P+ SAQQ L TR +F+ GA A XXXXXXX A P GS APDFTLPSN G K +L DL K TVLY YPGDFTSGCTIEA+GFQKD ++Y +AQ+VG+SVDS +KHLDF+K YGL F LLSD A VAD YG+KLDIP +GKFANR+T+II DGKIEKVF+DVE VA+HS +VLA L S
Sbjct: 10 VVAMAAHASAFV----PTMSAQQP---------LATRANFLRS-AGAAAATAVVAXXXXXXXXXXXXAPLPAVGSAAPDFTLPSNDGGKAYSLSDLTGTGKTTVLYAYPGDFTSGCTIEARGFQKDIDRYKALNAQVVGMSVDSAEKHLDFKKKYGLDFILLSDKNAVVADKYGAKLDIPIIGKFANRITYIISPDGKIEKVFTDVESHVAQHSSEVLAYLES 218
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: L1J8E5_GUITC (Peroxiredoxin n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J8E5_GUITC) HSP 1 Score: 184 bits (466), Expect = 4.670e-51 Identity = 94/159 (59.12%), Postives = 112/159 (70.44%), Query Frame = 2
Query: 272 SVAASTPTAGSVAPDFTLPSNTGKDINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLASL 748
S A P+ + APDF LPSN GKDI LKDL K K TVLYFYPGDFTSGCTIEA F+K A+IVGVSVDSV+KHLDF K YGL FPLLSD G V+ +YGS L IPFMG F+NR T+II G + VF+DV+ ++ KH+++V+A L L
Sbjct: 83 SFAEGLPSVNAPAPDFLLPSNEGKDIGLKDL--KGKWTVLYFYPGDFTSGCTIEANNFEKASADIRALGAEIVGVSVDSVEKHLDFAKKYGLSFPLLSDQGGKVSQLYGSALQIPFMGSFSNRQTYIIDPSGNLRWVFTDVQSRLNKHADEVIAKLKEL 239
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: A0A4D9CLH8_9STRA (Thioredoxin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLH8_9STRA) HSP 1 Score: 182 bits (462), Expect = 5.950e-50 Identity = 90/156 (57.69%), Postives = 114/156 (73.08%), Query Frame = 2
Query: 281 ASTPTAGSVAPDFTLPSNTGKDINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLASL 748
A P G APDF+LPS+ GK ++L DL K K+TVLYF+P FTS CT+EAK FQ+D + Y + +AQIVGVSVD DK DF+ GL F LLSD GA +++ YGS LDIPF+G+F+NR T+II DGK+ KVF++VE KV KHSE+VL L +L
Sbjct: 125 ADVPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKISEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKAL 280
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: A0A7S0Z1C5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1C5_9CRYP) HSP 1 Score: 177 bits (449), Expect = 1.260e-48 Identity = 91/159 (57.23%), Postives = 112/159 (70.44%), Query Frame = 2
Query: 272 SVAASTPTAGSVAPDFTLPSNTGKDINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLASL 748
S A+TP + APDF LPSN K I LKDL K K TVLYFYPGDFTSGCTIEA+ F+K+ K + A+IVGVSVDS +KHLDF K YGL FPLLSD G V+D YGS L + +G F+NR T++I G ++ VF+DV+ K+ H+EDV+A L L
Sbjct: 78 SAFAATPAIDAPAPDFELPSNRDKSIGLKDL--KGKWTVLYFYPGDFTSGCTIEAQNFEKNAPKIRDLGAEIVGVSVDSAEKHLDFAKKYGLSFPLLSDKGGKVSDSYGSALKLGPIGTFSNRQTYLIDPSGTLKYVFTDVQSKIQSHAEDVVAKLTEL 234
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: A0A7S0U0Z0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U0Z0_HEMAN) HSP 1 Score: 177 bits (450), Expect = 1.320e-48 Identity = 103/232 (44.40%), Postives = 144/232 (62.07%), Query Frame = 2
Query: 74 VSILLLGST--ADAFA-----MSIRPSSSAQQQRHPIATSASLQTRGDFVNQIVGAGAXXXXXXXXXXXXXLPSVAASTPTAGSVAPDFTLPSNTGKDINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLASL 748
+++L L + ADAFA M +R +S P + ++ +R F ++ AG + S A+TPT + APDF LPSN K+I LKDL K K TVLYFYPGDFTSGCTIEA+ F+K+ ++ + A+IVGVSVDS +KHLDF K YGL FPLLSD G V++ YG+ L + +G F+NR T++I G ++ VF+DV+ K+ H+E+V+A L+ L
Sbjct: 26 IALLALAAATGADAFAATSGHMGLRSTSMQANNMSPASCDSAAVSRRSFFSKGAAAGVVTTGL--------VQSAFAATPTIDAPAPDFELPSNRDKNIGLKDL--KGKWTVLYFYPGDFTSGCTIEAQNFEKNSKQIRDLGAEIVGVSVDSAEKHLDFAKKYGLSFPLLSDKGGKVSESYGTALKLGPIGTFSNRQTYLIDPSGNLKYVFTDVQSKIKVHAEEVVAKLSEL 247
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: A0A7S1FR32_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FR32_9STRA) HSP 1 Score: 159 bits (402), Expect = 9.990e-42 Identity = 85/164 (51.83%), Postives = 110/164 (67.07%), Query Frame = 2
Query: 269 PSVAASTPTA---GSVAPDFTLPSNTGK-DINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLASL 748
PS A++ A G+ APDF LPS+TGK + L+DL K K TVLYFYPG FTSGCT+EA+GFQ+D + Y +AQ+VGVSVD V+K+ F + L F +LSD G V+ Y S L +P G F+NR T+IIG DG + VF DVE +VA+HS +V+ L L
Sbjct: 79 PSAFAASEVANMLGATAPDFDLPSSTGKGNTTLRDLTSKQKWTVLYFYPGAFTSGCTLEARGFQRDQDAYRSLNAQVVGVSVDPVEKNAQFCAAENLDFFMLSDFGGKVSKRYNSALTVPGFGTFSNRKTYIIGPDGTVRWVFEDVESRVARHSGEVIEKLREL 242
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: B7G0F8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0F8_PHATC) HSP 1 Score: 156 bits (395), Expect = 4.180e-41 Identity = 79/161 (49.07%), Postives = 109/161 (67.70%), Query Frame = 2
Query: 269 PSVAASTPTAGSVAPDFTLPSNTGK-DINLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLASL 748
P A + P G+ AP F LP++ G +LK+L+ K TVLYFYPG F+ GCT+EA+GFQ+D E+Y +AQIVGVSVD V+K+ F + GL F +LSD G V+++YGS L +P G F+NR T+II +G + VF+DVE ++A+HS +VL L L
Sbjct: 48 PLPAFAVPVTGAKAPFFELPNSRGSGSTSLKNLINSGKWTVLYFYPGAFSKGCTLEARGFQRDIERYRALNAQIVGVSVDPVEKNAQFCSAEGLDFYMLSDTGGRVSNLYGSALSVPGFGMFSNRQTYIIDPEGNLRWVFTDVESRIARHSVEVLEKLNEL 208
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Match: A0A448ZAS8_9STRA (Thioredoxin domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAS8_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.010e-40 Identity = 82/161 (50.93%), Postives = 108/161 (67.08%), Query Frame = 2
Query: 269 PSVAASTPTAGSVAPDFTLPSNTGKD-INLKDLLKKAKHTVLYFYPGDFTSGCTIEAKGFQKDFEKYGEKDAQIVGVSVDSVDKHLDFEKSYGLQFPLLSDVGANVADMYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFSDVEGKVAKHSEDVLATLASL 748
P + P+ G+ AP F LP++ G + L L+K +K TVLYFYPG FTSGCT+EA+GFQKD E+Y + +AQIVGVSVD V+K+ F L F +LSD G V+ YGS L IP G F+NR T+II G++ +F+DVE K+A+HS +VL LA L
Sbjct: 69 PPSSTGLPSKGARAPSFELPNSRGTGLVTLDGLVKNSKWTVLYFYPGAFTSGCTLEARGFQKDLEEYRKLNAQIVGVSVDPVEKNAQFCTEEKLDFFMLSDKGGIVSKKYGSALSIPGFGTFSNRQTYIIDPSGELRWIFTDVESKIARHSSEVLEKLAEL 229 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig398.10318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig398.10318.1 >prot_H-paniculata_contig398.10318.1 ID=prot_H-paniculata_contig398.10318.1|Name=mRNA_H-paniculata_contig398.10318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp MMPFLLCVVSILLLGSTADAFAMSIRPSSSAQQQRHPIATSASLQTRGDFback to top mRNA from alignment at H-paniculata_contig398:961..11274- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig398.10318.1 ID=mRNA_H-paniculata_contig398.10318.1|Name=mRNA_H-paniculata_contig398.10318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10314bp|location=Sequence derived from alignment at H-paniculata_contig398:961..11274- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig398:961..11274- >mRNA_H-paniculata_contig398.10318.1 ID=mRNA_H-paniculata_contig398.10318.1|Name=mRNA_H-paniculata_contig398.10318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig398:961..11274- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |