prot_H-paniculata_contig3977.10313.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3977.10313.1
Unique Nameprot_H-paniculata_contig3977.10313.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
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BLAST of mRNA_H-paniculata_contig3977.10313.1 vs. uniprot
Match: D7FP39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP39_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.120e-24
Identity = 57/92 (61.96%), Postives = 67/92 (72.83%), Query Frame = 0 
Query:    9 DYVLRQKAVKGIPKSSEARSSYERAGRSTRLNGQDMLMPGTVQVEKVHTPG--VHHPKFGLLFLNDGSLIVYVGTANLGTDTAIELTWVQRF 98
            DY+L ++++ G   SSE R   + AGR  RL+  +M MP  VQVEKVHT G  VHHPKFGLLFL D SL+VYVGT NLG DTAI+ TWVQRF
Sbjct:  210 DYILFRESL-GKNASSEQRERLKAAGREDRLDYWEMSMPAHVQVEKVHTGGLGVHHPKFGLLFLKDDSLVVYVGTGNLGVDTAIDATWVQRF 300
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BLAST of mRNA_H-paniculata_contig3977.10313.1 vs. uniprot
Match: B8CAD5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAD5_THAPS)

HSP 1 Score: 55.5 bits (132), Expect = 1.050e-6
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:   59 GVHHPKFGLLFLNDGSLIVYVGTANLGTDTAIELTWVQRFNAR 101
            GVHHPKF LLF   GSL+V + T+NL + TA++ +WVQRF  +
Sbjct:  618 GVHHPKFFLLFEKRGSLVVIISTSNLTSPTALDASWVQRFEQK 660
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3977.10313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP39_ECTSI1.120e-2461.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8CAD5_THAPS1.050e-655.81Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3977contigH-paniculata_contig3977:7685..9235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3977.10313.1mRNA_H-paniculata_contig3977.10313.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3977 7685..9235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3977.10313.1 ID=prot_H-paniculata_contig3977.10313.1|Name=mRNA_H-paniculata_contig3977.10313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
ESGGRDLGDYVLRQKAVKGIPKSSEARSSYERAGRSTRLNGQDMLMPGTV
QVEKVHTPGVHHPKFGLLFLNDGSLIVYVGTANLGTDTAIELTWVQRFNA
RRP
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