prot_H-paniculata_contig3975.10307.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3975.10307.1
Unique Nameprot_H-paniculata_contig3975.10307.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length381
Homology
BLAST of mRNA_H-paniculata_contig3975.10307.1 vs. uniprot
Match: A0A6H5L1F7_9PHAE (MMR_HSR1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F7_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 1.460e-123
Identity = 207/400 (51.75%), Postives = 259/400 (64.75%), Query Frame = 0
Query:    5 GFTVALVGRTSRSKTAFLQAASSTESPISADNNETRVWYTSSIAPREDDLTQAPANGFSPAGERLLSVQLKHASVGDISGE--------------------GLD-TPPAILLVVAPELVFCKGRPRPSRTGVNPLRAAVTRFQERLGG-PMPFAVAVSIDVEEADDQLMPTLDKSFLATVKAELEGDHIPVVLVSPRTEMWLLEQQREGGRVSYRRGGTDFRIRPGFEHVMDKGAVERARAIFEVCGGTGIQAAVSAAIALQPTALVFPVADFHTLQSSGWEGNGAPLAAMRTCCLCRASSTARDVFAAQKVDGIWGGDLLRAEIIRFVVDPEARNDPLALGLDTPLGAGAWLLRLTANRKPVPMWQAG--AKAGAVPGKALPKIQFGDLRGKDRRRGKS 380
            G  VAL+GR S  K+ FL+AASS++  +    ++  VW+TS +APRE DL  AP +GF+P+GERLL  QL HASV  + GE                    G D   PA+L+VV  E+ F KG PRP+R GV P++AAV+R +ERLGG  +P AVAVS DVE        +  K+FL +VK E+  + +PVV +SPRTE+WL EQ+ EGGRVSYRRG + FRI P F+ +MDK  +  ARA F+VCGGTGI AA S AI L P  LVFPV DF TLQSSGW G+GAP+A +RTC L R +S+ARD+FA +K +GI  G+L+ AE      +   R  PL L LD P+G GAWL+RL  +RK   MW A   A  G   GK L  +QFGDLR KDRRRGKS
Sbjct:    7 GVRVALIGRNSTCKSLFLKAASSSDKLLPDTASDAEVWWTSPLAPREADLAHAPEHGFAPSGERLLPAQLNHASVASVLGEESKKSDGDRCEQAVADAARQGADEATPAVLMVVGAEISFHKGYPRPNRGGVTPVKAAVSRVRERLGGGQVPLAVAVSFDVEWDGGPSQSSAMKAFLQSVKDEMALEGVPVVAISPRTELWLREQESEGGRVSYRRGDSQFRIHPAFQSLMDKKEITNARAAFDVCGGTGILAAASTAIGLDPPTLVFPVGDFLTLQSSGWCGDGAPVATLRTCRLMRRNSSARDLFAVEKKEGILAGELVGAEASLAPTNSAGRAGPLPLDLDAPIGNGAWLVRLAGSRKAAKMWNAAPAAATGGKGGKPLASVQFGDLRSKDRRRGKS 406          
BLAST of mRNA_H-paniculata_contig3975.10307.1 vs. uniprot
Match: A0A836CLS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.610e-25
Identity = 85/227 (37.44%), Postives = 108/227 (47.58%), Query Frame = 0
Query:  173 VVLVSPRTEMWLLEQQREGGRVSYRRGGTDF---RIRPGFEHVMDKGAVERARAIFEVCGGTGIQAAVSAAIAL--QPTALVFPVADFHTLQSSGWEGNGAPLAAMRTCCLCRASSTARDVFAAQKVDGI--WGGDLLRAEIIRFVVDPEARNDPLA--------------LGLDTPLGAGAWLLRLTANRKPVPMWQA--GAKAGAVPGKALPKIQFGDLRGKDRR 376
            V  VSP  E WL EQQ EGGR+S+RRG   F    I+P F  V+      RA A    CGG+GI AA+ AA+ L   P  LV PV D  TLQS GWEG GAP AA+R C      +TA  +    K        G+L++A  +       A                    L  +  +GAG  ++ +   R+PVPMWQ              LP +QFGDLR K+R+
Sbjct:   82 VFAVSPWLERWLAEQQ-EGGRLSHRRGSDSFVASAIKPAFASVIPAAEAWRAAAACRACGGSGIPAAIVAAVGLCSPPLTLVLPVGDLATLQSLGWEGVGAPRAALRDCLQVWPGTTAAQLCEILKSPPHERLSGELVQATALSVSWSRAAAXXXXXXXXXXXXXXXVVRQLRSNEAIGAGCHVVAIETTRRPVPMWQGEXXXXXXXXXXAKLPSVQFGDLRSKNRK 307          
BLAST of mRNA_H-paniculata_contig3975.10307.1 vs. uniprot
Match: A0A7S1X5W0_9CHLO (Hypothetical protein n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X5W0_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 2.230e-5
Identity = 68/230 (29.57%), Postives = 101/230 (43.91%), Query Frame = 0
Query:  150 LMPTLDKSFLATVKAELE---GDHI--PVVLVSPRTEMWLLEQQREGGRVSYRRGGTDFRIRPGFEHVMDKGAVERARAIFEVCGGTGIQAAVSAAIALQPTALVFPVADFHT------------LQSSGWEGNGA-------------------PLAAMRTCCLCRASSTARDVFAAQKVDGIWGGDLLRAEIIRFVVDPEARNDPLALGLDTPLGAGAWLLRLTANRK 343
            +M  L+K+ +A V+A +E   G H     V VS  +E WL +  R  G+V Y  G +  R     + V+ +    +A+ +    G TG+QAA+SAA+AL+P A+ FPVA+  T            L SSG  G  A                   P A +R C L + SS+  ++F   K        LL  E +R     E R     +  D PL     ++++  NRK
Sbjct:  506 IMLVLNKADIAGVEARVEAVRGAHPREASVAVSAESEAWLCKA-RALGKVEYLSGASTCRALNEDDAVVRRVREIQAK-VLRRFGSTGVQAALSAAVALRPPAMAFPVANLDTCAALPIRPQTSPLISSGDSGREAESVGEAQPLHGGVRGSSAGPAAVLRDCVLLKPSSSVGELFDVLKKPPYC---LLHGEYVRAECRLE-RGKRHVIRKDDPLTRSNAVVQIMCNRK 729          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3975.10307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L1F7_9PHAE1.460e-12351.75MMR_HSR1_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A836CLS2_9STRA1.610e-2537.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1X5W0_9CHLO2.230e-529.57Hypothetical protein n=2 Tax=Tetraselmis chuii Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013646Uncharacterised GTP-binding protein, C-terminalPFAMPF08438MMR_HSR1_Ccoord: 161..254
e-value: 2.5E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR23305GTP-BINDING PROTEIN-RELATEDcoord: 169..306
NoneNo IPR availablePANTHERPTHR23305:SF1coord: 169..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3975contigH-paniculata_contig3975:1724..6492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3975.10307.1mRNA_H-paniculata_contig3975.10307.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3975 1724..6492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3975.10307.1 ID=prot_H-paniculata_contig3975.10307.1|Name=mRNA_H-paniculata_contig3975.10307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=381bp
MQETGFTVALVGRTSRSKTAFLQAASSTESPISADNNETRVWYTSSIAPR
EDDLTQAPANGFSPAGERLLSVQLKHASVGDISGEGLDTPPAILLVVAPE
LVFCKGRPRPSRTGVNPLRAAVTRFQERLGGPMPFAVAVSIDVEEADDQL
MPTLDKSFLATVKAELEGDHIPVVLVSPRTEMWLLEQQREGGRVSYRRGG
TDFRIRPGFEHVMDKGAVERARAIFEVCGGTGIQAAVSAAIALQPTALVF
PVADFHTLQSSGWEGNGAPLAAMRTCCLCRASSTARDVFAAQKVDGIWGG
DLLRAEIIRFVVDPEARNDPLALGLDTPLGAGAWLLRLTANRKPVPMWQA
GAKAGAVPGKALPKIQFGDLRGKDRRRGKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013646MMR_HSR1_C