prot_H-paniculata_contig3973.10304.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3973.10304.1
Unique Nameprot_H-paniculata_contig3973.10304.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length330
Homology
BLAST of mRNA_H-paniculata_contig3973.10304.1 vs. uniprot
Match: A0A6H5JKF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF0_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.870e-86
Identity = 181/319 (56.74%), Postives = 206/319 (64.58%), Query Frame = 0
Query:    4 DDWDDWGDGDDAGAPSADSVKNTLHQEGEAQEWDWPVHDGSQERERPPQ---CRQQRQQSPKTSEELEAEALFTQQVDEMTGKFFAELGSYLEDLVDPSVREGINQELMRRDFSSLTAYYGQREDLATYTIHTELQRMRYSVVTEDGDRLQPAXXXXXXXXXGTGSMAPGHEGTDYGQDRES-MKSFLSRRKEHAMVRMANQSIFADMLHA----LQGRLLRPELEISVISRDCKFSLDFRREVLEAQSLFGVSTVGGGMSGGGETLEIAHIKGIAFVDTRNKTCEQRLLSPELRMVFDDDMRASARTLANHALMDGGV 314
            DDWDDWGD DD     AD   N+   + +++ WDWPV   +    +PP      QQ  Q    + E EA       V EMT KFF EL SYLE+L DPSVRE INQEL + DF+S T YY  R+DLATYT+ TELQRMRYSVVTEDG RL                  PG EG   G    S ++ FL+ R   AM+RMANQSIFADML A    +QGRLLRP+LEISVISRDC+F LDF   VLEA SLF VSTVGGG  G  ETLEIAHIKG A VD+R++TC QRLLSP+LRMVFDD MR SAR LA H+ MD G 
Sbjct:    3 DDWDDWGD-DDGEVAVADGGDNSNSSD-KSEGWDWPVAATT----KPPSPAIAIQQSSQDENAAVEREAREAV---VAEMTEKFFVELRSYLENLADPSVREEINQELNKCDFASFTRYYDGRDDLATYTLDTELQRMRYSVVTEDGRRLGGDERE---------GAEPGLEGGGRGXXGGSVLREFLAGRVGDAMLRMANQSIFADMLEARFRAIQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLFEVSTVGGGGPGAPETLEIAHIKGTASVDSRSQTCTQRLLSPQLRMVFDDAMRTSARVLALHSFMDRGA 303          
BLAST of mRNA_H-paniculata_contig3973.10304.1 vs. uniprot
Match: A0A7S3UTS6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTS6_HETAK)

HSP 1 Score: 91.7 bits (226), Expect = 3.290e-19
Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 0
Query:  108 LMRRDFSSLTAYYGQREDLATYTIHTELQRMRYSVVTEDGDRLQPAXXXXXXXXXGTGSMAPGHEGTDYGQDRESMKSFLSRRKEHAMVRMANQSIFADMLHALQGRLLRPELEISVISRDCKFSLDFRREVLEAQSLF 246
            L RR F +L AYY +R +LA YT+ +E+ RM+Y V+        PA            S    H+G     + E ++  L   K   +VR ANQS+FAD+L A+Q R LRP+L +++ISRD  F LD ++E +EA+S F
Sbjct:    6 LARRPFRALHAYYEERPELADYTVSSEVPRMKYEVI--------PAK-----------SQGQEHDGPI--TNTEDVQEVLMLHKWSLVVRYANQSLFADLLSAIQDRFLRPDLNVAIISRDSSFKLDLKKETVEAKSEF 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3973.10304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKF0_9PHAE1.870e-8656.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3UTS6_HETAK3.290e-1939.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3973contigH-paniculata_contig3973:9449..16125 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3973.10304.1mRNA_H-paniculata_contig3973.10304.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3973 9212..16125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3973.10304.1 ID=prot_H-paniculata_contig3973.10304.1|Name=mRNA_H-paniculata_contig3973.10304.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp
MADDDWDDWGDGDDAGAPSADSVKNTLHQEGEAQEWDWPVHDGSQERERP
PQCRQQRQQSPKTSEELEAEALFTQQVDEMTGKFFAELGSYLEDLVDPSV
REGINQELMRRDFSSLTAYYGQREDLATYTIHTELQRMRYSVVTEDGDRL
QPAPAPAPAISIGTGSMAPGHEGTDYGQDRESMKSFLSRRKEHAMVRMAN
QSIFADMLHALQGRLLRPELEISVISRDCKFSLDFRREVLEAQSLFGVST
VGGGMSGGGETLEIAHIKGIAFVDTRNKTCEQRLLSPELRMVFDDDMRAS
ARTLANHALMDGGVNAGGGGVGGSGGRGRW
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